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Neuroanatomy ›External Resources

This page lists Open Source resources that complement ImageJ tools for neuronatomy, including SNT, NeuronJ, and TrakEM2.

Online Tools

Visualization Analysis
SharkViewer Remod
MPDL SWC service L-measure (applet)
HBP Morphology Viewer  

Desktop Tools

Visualization and Analysis Analysis
Py3DN L-measure
NeuroMorph btmorph

Tracing Tools

Software packages for neuronal tracing not based on ImageJ include: Neuromantic, NeuronStudio, neuTube, Vaa3D