This page lists Open Source resources that complement ImageJ tools for neuronatomy, including SNT, NeuronJ, and TrakEM2.
Online Tools
Visualization | Analysis |
---|---|
SharkViewer | Remod |
MPDL SWC service | L-measure (applet) |
HBP Morphology Viewer |
Desktop Tools
Visualization and Analysis | Analysis |
---|---|
Py3DN | L-measure |
NeuroMorph | btmorph |
nat |
Tracing Tools
Software packages for neuronal tracing not based on ImageJ include: Neuromantic, NeuronStudio, neuTube, Vaa3D