[ImageJ-bugs] [Bug 996] Binary image

bugzilla at fiji.sc bugzilla at fiji.sc
Wed Jan 28 08:54:21 CST 2015


http://fiji.sc/bugzilla/show_bug.cgi?id=996

Wayne Rasband <wsr at nih.gov> changed:

           What    |Removed                     |Added
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                 CC|                            |wsr at nih.gov

--- Comment #1 from Wayne Rasband <wsr at nih.gov> ---
You need to redirect to the second image and run the particle analyzer on the 
binary image. Here is a macro example:

  run("Blobs (25K)");
  rename("image1");
  setOption("BlackBackground", true);
  run("Make Binary");
  setThreshold(255, 255);
  newImage("image2", "16-bit ramp", 256, 254, 1);
  run("Set Measurements...", "area mean min redirect=image2");
  selectWindow("image1"); // select binary image
  run("Analyze Particles...", "display clear");

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