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<body><span class="vcard"><a class="email" href="mailto:wsr@nih.gov" title="Wayne Rasband <wsr@nih.gov>"> <span class="fn">Wayne Rasband</span></a>
</span> changed
<a class="bz_bug_link
bz_status_NEW "
title="NEW - Binary image"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=996">bug 996</a>
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<th>What</th>
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<th>Added</th>
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<td style="text-align:right;">CC</td>
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<td>wsr@nih.gov
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<b><a class="bz_bug_link
bz_status_NEW "
title="NEW - Binary image"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=996#c1">Comment # 1</a>
on <a class="bz_bug_link
bz_status_NEW "
title="NEW - Binary image"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=996">bug 996</a>
from <span class="vcard"><a class="email" href="mailto:wsr@nih.gov" title="Wayne Rasband <wsr@nih.gov>"> <span class="fn">Wayne Rasband</span></a>
</span></b>
<pre>You need to redirect to the second image and run the particle analyzer on the
binary image. Here is a macro example:
run("Blobs (25K)");
rename("image1");
setOption("BlackBackground", true);
run("Make Binary");
setThreshold(255, 255);
newImage("image2", "16-bit ramp", 256, 254, 1);
run("Set Measurements...", "area mean min redirect=image2");
selectWindow("image1"); // select binary image
run("Analyze Particles...", "display clear");</pre>
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