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Ticket #44 (closed feature: fixed)

Opened 2010-03-01T20:22:44-06:00

Last modified 2014-05-01T16:51:28-05:00

Support for multi-view spectral lifetime visualization

Reported by: curtis Owned by: curtis
Priority: major Milestone: imagej-2.5.0
Component: VisBio Version:
Severity: non-issue Keywords:
Cc: Blocked By: #18


LOCI originally created  VisBio to visualize large multidimensional biological datasets beyond space and time—in particular, a major goal was to provide a tool for working with combined spectral lifetime data. However, we ended up creating a second program,  SLIM Plotter, specifically for that purpose, and never integrated the functionality into anything else (VisBio, ImageJ, etc.).

We would like to create several views for spectral lifetime data within ImageJ as part of a VisBio add-on:

  • Intensity view (collapses lifetime histograms)
  • Lifetime decay view (histogram at a given pixel or region)
  • Spectral distribution view

The views should be linked by user interaction as appropriate.

As we begin working to integrate these  SLIM Plotter goals into ImageJ, we should split out tasks into more tickets.

Change History

comment:1 Changed 2012-02-23T12:36:09-06:00 by curtis

  • Type changed from task to feature

comment:2 Changed 2012-02-24T13:00:21-06:00 by curtis

  • Blocked By 18 added

comment:3 Changed 2012-06-25T14:00:13-05:00 by curtis

  • Blocking 1162 added

comment:4 Changed 2012-06-25T14:00:32-05:00 by curtis

  • Blocking 1162 removed

comment:5 Changed 2013-12-06T18:00:31-06:00 by aivar

  • Owner changed from aivar to curtis
  • Status changed from new to assigned

comment:6 Changed 2014-05-01T16:51:28-05:00 by curtis

  • Status changed from assigned to closed
  • Resolution set to fixed

Our current solution is the  SLIM Curve plugin for ImageJ. It would still be nice to integrate more related functionality from SLIM Plotter and VisBio into the SLIM Curve plugin, but those sorts of improvements are covered in the  SLIM Curve plugin issues on GitHub.