[ImageJ-devel] ImgLib2 and RGB Stack Images / Extending TrackMate

[tinevez at pasteur.fr]

Hi Thorsten, 


I think the way is to wrap your image into a ARGBType ImgLib2 images. 

But you would have to change TrackMate because right now the GUI refuses to start with a RGB image. 


Best

jy







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Jean-Yves Tinevez
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De : Thorsten Wagner
Envoyé : ‎lundi‎ ‎9‎ ‎mars‎ ‎2015 ‎20‎:‎47
À : imagej-devel at imagej.net





Dear list,

I currently want to extend TrackMate with a spot feature for RGB Stacks.
I want to calculate the hue of the center for each spot to filter the
particle by color before connecting the dots to tracks.

However, TrackMate uses ImgLib2 and I wondering how to work with RGB
Stack images. I cant find any examples how to do that.

Any help is highly appreciated!

Cheers,
Thorsten



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