[ImageJ-devel] ImgLib2 and RGB Stack Images / Extending TrackMate
wagner at biomedical-imaging.de
Mon Mar 9 15:25:37 CDT 2015
thank you for your answer. I will have look into the ARGBType of the
ImgLib2. You are right, TrackMate refuses to start with RGB images but
it does not to refuse to start with RGB-Stack images. So my thought was,
that I can simply work with RGB-Stack images instead of RGB images?
Am Montag, den 09.03.2015, 19:55 +0000 schrieb tinevez at pasteur.fr:
> Hi Thorsten,
> I think the way is to wrap your image into a ARGBType ImgLib2 images.
> But you would have to change TrackMate because right now the GUI
> refuses to start with a RGB image.
> Jean-Yves Tinevez
> PFID - Imagopole
> Institut Pasteur
> 25-28, rue du Docteur Roux
> 75724 Paris cedex 15
> mob: +33 7 88 17 97 69
> tel: +33 1 45 68 82 18
> fax: +33 1 44 38 92 54
> De : Thorsten Wagner
> Envoyé : lundi 9 mars 2015 20:47
> À : imagej-devel at imagej.net
> Dear list,
> I currently want to extend TrackMate with a spot feature for RGB
> I want to calculate the hue of the center for each spot to filter the
> particle by color before connecting the dots to tracks.
> However, TrackMate uses ImgLib2 and I wondering how to work with RGB
> Stack images. I cant find any examples how to do that.
> Any help is highly appreciated!
> ImageJ-devel mailing list
> ImageJ-devel at imagej.net
More information about the ImageJ-devel