[ImageJ-devel] Where do I find the Fiji parent pom?

Curtis Rueden ctrueden at wisc.edu
Mon Nov 17 12:48:25 CST 2014


Hi Steffi,

FWIW, I bumped to BF 5.0.6 just now:
https://github.com/scijava/pom-scijava/commit/931b7add9607d35022432af0f9999cc38661241c

Regards,
Curtis

On Mon, Nov 17, 2014 at 12:41 PM, Mark Hiner <hiner at wisc.edu> wrote:

> Hi Stephan,
>
> >Where is the 5.0.3 defined to which it currently points?
>
> Here it is
> <https://github.com/scijava/pom-scijava/blob/master/pom.xml#L191>! :)
> It's in pom-scijava to allow any SciJava project to use a consistent
> version of Bio-Formats.
>
> Let me know if you have any more questions!
>
> - Mark
>
> On Mon, Nov 17, 2014 at 12:27 PM, Stephan Preibisch <
> stephan.preibisch at gmx.de> wrote:
>
>> Thanks a lot Mark,
>>
>> I managed to change the version to 5.0.6.!
>>
>> Just out of curiosity, I still do not see the bio-formats version being
>> defined in here: https://github.com/fiji/pom-fiji/blob/master/pom.xml
>>
>> Where is the 5.0.3 defined to which it currently points?
>>
>> Thanks so much,
>> Stephan
>>
>> On Nov 17, 2014, at 13:17 , Mark Hiner <hiner at wisc.edu> wrote:
>>
>> >The background is that I want to try Bioformats 5.0.6, so I guess the
>> right thing is to overwrite the version tag inherited from fiji-pom. I just
>> wanted to see how it is defined in there to actually overwrite it.
>>
>> It would be helpful if I finished reading your complete question.
>>
>> The Bio-Formats dependencies are managed in pom-scijava
>> <https://github.com/scijava/pom-scijava>. You'll want to look at the
>> <properties> and <dependencyManagement> blocks to get a feel how things
>> work. For testing 5.0.6 locally it's also fine to put a
>> <bio-formats.version> property in the pom.xml of the project you're testing.
>>
>> Best,
>> Mark
>>
>> On Mon, Nov 17, 2014 at 12:12 PM, Mark Hiner <hiner at wisc.edu> wrote:
>>
>>> Hi Stephan,
>>>
>>> >I think this is maybe a stupid question, but where do I find the parent
>>> pom-fiji?
>>>
>>> It's always helpful to ask questions on public lists! All of the project
>>> poms (fijji, imagej, scijava, scifio) are in their own repo under their
>>> respective organization. So pom-fiji is:
>>> https://github.com/fiji/pom-fiji
>>>
>>> Also, if you go to an individual organization's page (e.g.
>>> https://github.com/fiji/) you can filter the available repositories to
>>> look for any component.
>>>
>>> Hope that helps!
>>>
>>> - Mark
>>>
>>> On Mon, Nov 17, 2014 at 12:06 PM, Stephan Preibisch <
>>> stephan.preibisch at gmx.de> wrote:
>>>
>>>> Hi,
>>>>
>>>> I think this is maybe a stupid question, but where do I find the parent
>>>> pom-fiji? The pom.xml in the fiji project itself still defines it as its
>>>> parent (https://github.com/fiji/fiji/blob/master/pom.xml), so I am not
>>>> sure where to look for it:
>>>>
>>>> <parent>
>>>> <groupId>sc.fiji</groupId>
>>>> <artifactId>pom-fiji</artifactId>
>>>> <version>5.1</version>
>>>> <relativePath />
>>>> </parent>
>>>>
>>>> Eclipse also says it cannot locate the parent pom when clicking on the
>>>> icon for that.
>>>>
>>>> The background is that I want to try Bioformats 5.0.6, so I guess the
>>>> right thing is to overwrite the version tag inherited from fiji-pom. I just
>>>> wanted to see how it is defined in there to actually overwrite it.
>>>>
>>>> Thanks so much,
>>>> Steffi
>>>>
>>>>
>>>> ---
>>>>
>>>> Dr. Stephan Preibisch
>>>> HFSP Fellow
>>>> Robert H. Singer / Eugene Myers lab
>>>>
>>>> Albert Einstein College of Medicine / HHMI Janelia Farm / MPI-CBG
>>>>
>>>> email: stephan.preibisch at einstein.yu.edu / preibischs at janelia.hhmi.org
>>>>  / preibisch at mpi-cbg.de
>>>> web: http://www.preibisch.net/ <http://fly.mpi-cbg.de/preibisch>
>>>>
>>>>
>>>> _______________________________________________
>>>> ImageJ-devel mailing list
>>>> ImageJ-devel at imagej.net
>>>> http://imagej.net/mailman/listinfo/imagej-devel
>>>>
>>>>
>>>
>>
>>
>
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