[ImageJ-devel] Where do I find the Fiji parent pom?

Mark Hiner hiner at wisc.edu
Mon Nov 17 12:41:09 CST 2014


Hi Stephan,

>Where is the 5.0.3 defined to which it currently points?

Here it is <https://github.com/scijava/pom-scijava/blob/master/pom.xml#L191>!
:) It's in pom-scijava to allow any SciJava project to use a consistent
version of Bio-Formats.

Let me know if you have any more questions!

- Mark

On Mon, Nov 17, 2014 at 12:27 PM, Stephan Preibisch <
stephan.preibisch at gmx.de> wrote:

> Thanks a lot Mark,
>
> I managed to change the version to 5.0.6.!
>
> Just out of curiosity, I still do not see the bio-formats version being
> defined in here: https://github.com/fiji/pom-fiji/blob/master/pom.xml
>
> Where is the 5.0.3 defined to which it currently points?
>
> Thanks so much,
> Stephan
>
> On Nov 17, 2014, at 13:17 , Mark Hiner <hiner at wisc.edu> wrote:
>
> >The background is that I want to try Bioformats 5.0.6, so I guess the
> right thing is to overwrite the version tag inherited from fiji-pom. I just
> wanted to see how it is defined in there to actually overwrite it.
>
> It would be helpful if I finished reading your complete question.
>
> The Bio-Formats dependencies are managed in pom-scijava
> <https://github.com/scijava/pom-scijava>. You'll want to look at the
> <properties> and <dependencyManagement> blocks to get a feel how things
> work. For testing 5.0.6 locally it's also fine to put a
> <bio-formats.version> property in the pom.xml of the project you're testing.
>
> Best,
> Mark
>
> On Mon, Nov 17, 2014 at 12:12 PM, Mark Hiner <hiner at wisc.edu> wrote:
>
>> Hi Stephan,
>>
>> >I think this is maybe a stupid question, but where do I find the parent
>> pom-fiji?
>>
>> It's always helpful to ask questions on public lists! All of the project
>> poms (fijji, imagej, scijava, scifio) are in their own repo under their
>> respective organization. So pom-fiji is:
>> https://github.com/fiji/pom-fiji
>>
>> Also, if you go to an individual organization's page (e.g.
>> https://github.com/fiji/) you can filter the available repositories to
>> look for any component.
>>
>> Hope that helps!
>>
>> - Mark
>>
>> On Mon, Nov 17, 2014 at 12:06 PM, Stephan Preibisch <
>> stephan.preibisch at gmx.de> wrote:
>>
>>> Hi,
>>>
>>> I think this is maybe a stupid question, but where do I find the parent
>>> pom-fiji? The pom.xml in the fiji project itself still defines it as its
>>> parent (https://github.com/fiji/fiji/blob/master/pom.xml), so I am not
>>> sure where to look for it:
>>>
>>> <parent>
>>> <groupId>sc.fiji</groupId>
>>> <artifactId>pom-fiji</artifactId>
>>> <version>5.1</version>
>>> <relativePath />
>>> </parent>
>>>
>>> Eclipse also says it cannot locate the parent pom when clicking on the
>>> icon for that.
>>>
>>> The background is that I want to try Bioformats 5.0.6, so I guess the
>>> right thing is to overwrite the version tag inherited from fiji-pom. I just
>>> wanted to see how it is defined in there to actually overwrite it.
>>>
>>> Thanks so much,
>>> Steffi
>>>
>>>
>>> ---
>>>
>>> Dr. Stephan Preibisch
>>> HFSP Fellow
>>> Robert H. Singer / Eugene Myers lab
>>>
>>> Albert Einstein College of Medicine / HHMI Janelia Farm / MPI-CBG
>>>
>>> email: stephan.preibisch at einstein.yu.edu / preibischs at janelia.hhmi.org
>>>  / preibisch at mpi-cbg.de
>>> web: http://www.preibisch.net/ <http://fly.mpi-cbg.de/preibisch>
>>>
>>>
>>> _______________________________________________
>>> ImageJ-devel mailing list
>>> ImageJ-devel at imagej.net
>>> http://imagej.net/mailman/listinfo/imagej-devel
>>>
>>>
>>
>
>
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