[ImageJ-devel] Where do I find the Fiji parent pom?

Stephan Preibisch stephan.preibisch at gmx.de
Mon Nov 17 12:27:05 CST 2014


Thanks a lot Mark,

I managed to change the version to 5.0.6.!

Just out of curiosity, I still do not see the bio-formats version being defined in here: https://github.com/fiji/pom-fiji/blob/master/pom.xml <https://github.com/fiji/pom-fiji/blob/master/pom.xml>

Where is the 5.0.3 defined to which it currently points?

Thanks so much,
Stephan

> On Nov 17, 2014, at 13:17 , Mark Hiner <hiner at wisc.edu> wrote:
> 
> >The background is that I want to try Bioformats 5.0.6, so I guess the right thing is to overwrite the version tag inherited from fiji-pom. I just wanted to see how it is defined in there to actually overwrite it.
> 
> It would be helpful if I finished reading your complete question.
> 
> The Bio-Formats dependencies are managed in pom-scijava <https://github.com/scijava/pom-scijava>. You'll want to look at the <properties> and <dependencyManagement> blocks to get a feel how things work. For testing 5.0.6 locally it's also fine to put a <bio-formats.version> property in the pom.xml of the project you're testing.
> 
> Best,
> Mark
> 
> On Mon, Nov 17, 2014 at 12:12 PM, Mark Hiner <hiner at wisc.edu <mailto:hiner at wisc.edu>> wrote:
> Hi Stephan,
> 
> >I think this is maybe a stupid question, but where do I find the parent pom-fiji?
> 
> It's always helpful to ask questions on public lists! All of the project poms (fijji, imagej, scijava, scifio) are in their own repo under their respective organization. So pom-fiji is: 
> https://github.com/fiji/pom-fiji <https://github.com/fiji/pom-fiji>
> 
> Also, if you go to an individual organization's page (e.g. https://github.com/fiji/ <https://github.com/fiji/>) you can filter the available repositories to look for any component.
> 
> Hope that helps!
> 
> - Mark
> 
> On Mon, Nov 17, 2014 at 12:06 PM, Stephan Preibisch <stephan.preibisch at gmx.de <mailto:stephan.preibisch at gmx.de>> wrote:
> Hi,
> 
> I think this is maybe a stupid question, but where do I find the parent pom-fiji? The pom.xml in the fiji project itself still defines it as its parent (https://github.com/fiji/fiji/blob/master/pom.xml <https://github.com/fiji/fiji/blob/master/pom.xml>), so I am not sure where to look for it:
> 
> <parent>
> <groupId>sc.fiji</groupId>
> <artifactId>pom-fiji</artifactId>
> <version>5.1</version>
> <relativePath />
> </parent>
> 
> Eclipse also says it cannot locate the parent pom when clicking on the icon for that.
> 
> The background is that I want to try Bioformats 5.0.6, so I guess the right thing is to overwrite the version tag inherited from fiji-pom. I just wanted to see how it is defined in there to actually overwrite it.
> 
> Thanks so much,
> Steffi
> 
> 
> ---
> 
> Dr. Stephan Preibisch
> HFSP Fellow
> Robert H. Singer / Eugene Myers lab
> 
> Albert Einstein College of Medicine / HHMI Janelia Farm / MPI-CBG
> 
> email: stephan.preibisch at einstein.yu.edu <mailto:stephan.preibisch at einstein.yu.edu> / preibischs at janelia.hhmi.org <mailto:preibischs at janelia.hhmi.org> / preibisch at mpi-cbg.de <mailto:preibisch at mpi-cbg.de>
> web: http://www.preibisch.net/ <http://fly.mpi-cbg.de/preibisch>
> 
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