[ImageJ-devel] Fiji and scifio

[Curtis Rueden]

Hi again,

I am working on a fix now and will commit by the end of today.
>

Problem should be fixed now. Please write back with any issues, and I'll
take a look tomorrow if needed.

-Curtis


On Mon, Apr 2, 2012 at 1:26 PM, Curtis Rueden <ctrueden at wisc.edu> wrote:

> Hi Stephan,
>
>
> are there plans to include scifio into some Fiji branch?  Or is it already?
>>
>
> SCIFIO is part of the Bio-Formats submodule, and is already included as
> part of loci_tools.jar.
>
>
>  I would like to build imglib2 master by Fiji's Build.sh which
>> is currently impossible due to the dependency of imglib-io to scifio.
>>
>
> Thanks for letting me know! The problem is not the dependency on SCIFIO,
> but rather a version clash between codebases. I am working on a fix now and
> will commit by the end of today.
>
> Regards,
> Curtis
>
>
>
> On Mon, Apr 2, 2012 at 12:29 PM, Stephan Saalfeld <saalfeld at mpi-cbg.de>wrote:
>
>> Hi,
>>
>> are there plans to include scifio into some Fiji branch?  Or is it
>> already?  I would like to build imglib2 master by Fiji's Build.sh which
>> is currently impossible due to the dependency of imglib-io to scifio.
>>
>> Building imglib2-io.jar <- imglib2/io/src/main/java/net/imglib2/io...
>> ./modules/imglib/imglib2/io/src/main/java/net/imglib2/io/ImgSaver.java:147:
>> cannot find symbol
>> symbol  : method guessImgLib(net.imglib2.meta.AxisType[],long[],long[])
>> location: class loci.formats.AxisGuesser
>> AxisGuesser.guessImgLib(axes, oldLengths, axisLengths);
>>           ^
>> ./modules/imglib/imglib2/io/src/main/java/net/imglib2/io/ImgSaver.java:453:
>> cannot find symbol
>> symbol  : method guessImgLib(net.imglib2.meta.AxisType[],long[],long[])
>> location: class loci.formats.AxisGuesser
>> dimOrder = AxisGuesser.guessImgLib(axes, oldLengths, axisLengths);
>>
>>
>> Thanks and best,
>> Stephan
>>
>>
>>
>>
>>
>>
>>
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>>
>
>
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