This is an archive of the old MediaWiki-based ImageJ wiki. The current website can be found at imagej.net.
StereoMate
| StereoMate (FIJI) | |
|---|---|
| Author | Steven J. West |
| Maintainer | Steven J. West |
| File | Stereo_Mate.jar |
| Source | [1] |
| Initial release | August 2019 |
| Development status | stable |
| Website | [2] |
Purpose
This plugin suite provides tools for the processing and analysis of confocal image stacks. It aims to allow the stereological and automated analysis of 3D reconstructed objects from regions of interest.
Documentation
This plugin provides the image processing and analysis functionality described in the following paper West, S-J. & Bennett, D-H-L. (August 2019), "StereoMate: A Stereological and Automated Analysis Platform for Assessing Histological Labelling in Cleared Tissue Specimens", bioRxiv, doi:https://doi.org/10.1101/648337, <https://www.biorxiv.org/content/10.1101/648337v2>
