Ticket #28 (closed task: fixed)
Opened 2010-02-19T14:30:13-06:00
Last modified 2011-02-25T10:53:53-06:00
Reimplement problematic NR SLIM-curve routines
| Reported by: | curtis | Owned by: | aivar |
|---|---|---|---|
| Priority: | major | Milestone: |
|
| Component: | Analysis Plugins | Version: | |
| Severity: | non-issue | Keywords: | |
| Cc: | Blocked By: | ||
| Blocking: |
Description
In partnership with Paul Barber at Oxford, we are developing a library of curve routines for combined spectral lifetime data, called SLIM-curve. Paul originally wrote these routines for his TRI2 program.
We are looking to release SLIM-curve as a separate open-source library, but there are licensing issues with a few functions which are based on code from Numerical Recipes—specifically, these functions:
- gaussj
- jacobi
- gammln
- gcf
- gser
- gammp
- mrqmin
As such, we need to recode them using an alternative implementation or from scratch. Libraries possibly useful in this endeavor include the GNU Scientific Library and the Flanagan Java Scientific Library.
Change History
comment:1 Changed 2011-02-16T13:10:39-06:00 by curtis
comment:2 Changed 2011-02-25T10:53:49-06:00 by aivar
- Component changed from visbio to imagej-analysis
This work is done, with some remaining issues that are being tracked in the LOCI trac:
comment:3 Changed 2011-02-25T10:53:53-06:00 by aivar
- Status changed from new to closed
- Resolution set to fixed
Aivar, what's the status of this work? Most if not all is complete, right?