[ImageJ-devel] Analyze Skeleton in jython

[Harri Jäälinoja]

Hi,

I would like to use the Analyze Skeleton plugin in a silent mode 
(http://fiji.sc/AnalyzeSkeleton) in Jython, but I don't know how to 
import the module.

Based on the jar-file contents...
dev at 192e0e6fb8a5:~/lmu-users/jaakko$ jar tvf 
/Fiji.app/plugins/AnalyzeSkeleton_-2.0.0-SNAPSHOT.jar
      0 Tue Apr 15 17:25:22 UTC 2014 META-INF/
    519 Tue Apr 15 17:25:20 UTC 2014 META-INF/MANIFEST.MF
      0 Tue Apr 15 17:25:20 UTC 2014 skeleton_analysis/
   1936 Tue Apr 15 17:25:20 UTC 2014 skeleton_analysis/Edge.class
   1111 Tue Apr 15 17:25:20 UTC 2014 skeleton_analysis/Point.class

... I have tried
import skeleton_analysis

... but I get the error
ImportError: No module named skeleton_analysis


JavaScript import works as advertised:
dev at 192e0e6fb8a5:~/lmu-users/jaakko$ cat test.js
importPackage(Packages.skeleton_analysis);
dev at 192e0e6fb8a5:~/lmu-users/jaakko$ /Fiji.app/ImageJ-linux64 test.js
dev at 192e0e6fb8a5:~/lmu-users/jaakko$


I have ImageJ 1.49g (Fiji).

Any ideas?

Thanks, best regards,
Harri