[ImageJ-devel] latest LoadAndDisplayDataset()
Curtis Rueden
ctrueden at wisc.edu
Fri Dec 19 16:07:34 CST 2014
Hi Brian,
Just a quick follow-up to let you know that Mark & I addressed some
problems with the tutorials today. For the most part, they should now be
working as intended if you update to the latest master.
However, a couple of minor issues remain:
* SCIFIO is a little aggressive about emitting things at INFO and WARN
levels, so you'll probably see some log messages. We will cut back on those.
* The ij1-patcher fails to patch something in ImageJ1 ("cannot find
ij.macro: ij.Macro found in ij/macro.class"). We'll have to investigate
that further later.
Regards,
Curtis
On Tue, Dec 16, 2014 at 10:56 AM, Brian Northan <bnorthan at gmail.com> wrote:
>
> Hi Mark
>
> Thanks a lot. Things are working now. Looks like I just had to specify
> that my development project use the latest imagej-common.
>
> Brian
>
> On Tue, Dec 16, 2014 at 11:24 AM, Mark Hiner <hiner at wisc.edu> wrote:
>>
>> Hi Brian,
>>
>> This was a known issue
>> <https://github.com/imagej/imagej-common/issues/34>. The original error
>> was fixed
>> <https://github.com/imagej/imagej-common/compare/055005ff59b8df637a1b1bfb403af0da9e4f3bdc...e11b7728408c7982939e075bba389378f5354398>,
>> but hasn't been propagated up to imagej-tutorials. This issue
>> <https://github.com/imagej/imagej-tutorials/issues/11> has more info.
>>
>> Sorry for the trouble... we hope to have the tutorials fixed in the next
>> day or so.
>>
>> Thanks!
>> - Mark
>>
>> On Tue, Dec 16, 2014 at 9:10 AM, Brian Northan <bnorthan at gmail.com>
>> wrote:
>>
>>>
>>> Hi developers
>>>
>>> I was having trouble with some previously functional ij-ops related
>>> jython scripts. So I grabbed a fresh copy of imagej-tutorials to double
>>> check some things.
>>>
>>> I noticed that in the 'LoadAndDisplayDataSet' project
>>> ij.dataset().open(...) is deprecated. When running the tutorial I get a
>>> 'No such class: io.scif.config.SCIFIOConfig' exception.
>>>
>>> Do I need to be using a different call to open a dataset?? If so can
>>> anyone point me to info on this?
>>>
>>> Sorry if I missed an announcement or other thread about this, I looked
>>> around a bit and couldn't find anything.
>>>
>>> Thanks a lot
>>>
>>> Brian
>>>
>>>
>>>
>>> _______________________________________________
>>> ImageJ-devel mailing list
>>> ImageJ-devel at imagej.net
>>> http://imagej.net/mailman/listinfo/imagej-devel
>>>
>>>
>>
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>
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