[ImageJ-devel] Maven problem

Stephan Preibisch preibischs at janelia.hhmi.org
Fri Apr 11 03:16:15 CDT 2014


Hi,

Christian helped me, I changed the version of ImgLib2 to ${imglib2.version}, now it works. 

But Eclipse doesn't recognize the opened project anymore (see screenshot). It also complains that "Overriding managed version 2.0.0-beta-25 for imglib2", no idea what that means.

Again, any help would be great.

Thanks a lot,
Steffi


On Apr 11, 2014, at 17:53 , Stephan Preibisch wrote:

> Hi guys,
> 
> I am almost there with the new spimreconstruction branch (https://github.com/fiji/spimreconstruction/tree/newspimreconstruction), and I re-implemented the first fusion in ImgLib2. Now I run into the problem that a simple
> 
> ImageJFunctions.show( ArrayImgs.floats( new long[]{ 300, 100, 200} ) );
> 
> fails with:
> 
> Exception in thread "main" java.lang.NoClassDefFoundError: net/imglib2/display/projector/Projector2D
> 	at net.imglib2.img.display.imagej.ImageJVirtualStack.<init>(ImageJVirtualStack.java:93)
> 	at net.imglib2.img.display.imagej.ImageJVirtualStackFloat.<init>(ImageJVirtualStackFloat.java:51)
> 	at net.imglib2.img.display.imagej.ImageJFunctions.wrapFloat(ImageJFunctions.java:238)
> 	at net.imglib2.img.display.imagej.ImageJFunctions.wrap(ImageJFunctions.java:170)
> 	at net.imglib2.img.display.imagej.ImageJFunctions.show(ImageJFunctions.java:219)
> 	at net.imglib2.img.display.imagej.ImageJFunctions.show(ImageJFunctions.java:123)
> 	at spim.fiji.plugin.Image_Fusion.run(Image_Fusion.java:40)
> 	at spim.fiji.plugin.Image_Fusion.main(Image_Fusion.java:104)
> Caused by: java.lang.ClassNotFoundException: net.imglib2.display.projector.Projector2D
> 	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
> 	at java.security.AccessController.doPrivileged(Native Method)
> 	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
> 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
> 	... 8 more
> 
> 
> I have all imglib projects checked out, up-to-date and maven depencies updated.
> 
> If anyone has any idea where this comes from would be great!
> 
> Thanks so much,
> Steffi
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