[ImageJ-devel] ImageJ2 Headless Question

[Joe Falconer]

Hi,

Hope I'm posting to the correct location.

I'm trying to do something that appears quite simple using ImageJ2 - read in a pgm file in headless mode and iterate over and analyse the pixel data in the image.

I've looked at the tutorials for ImageJ2 and I've tried the dataset example but I'm having some issues. I'm having Maven connector issues in Eclipse Kepler so I'm using the complete snapshot all jar and maybe this is the cause? This is my trace when running the dataset example :

WARN: Ignoring non-Maven build directory: C:\Documents and Settings\Joe\ImagingWorkspace\IJ2Test\bin
Exception in thread "main" java.lang.IllegalArgumentException: Invalid service: imagej.console.DefaultConsoleService

I've also tried the ImgLib2 examples on the fiji site referred to from the tutorials page but I've had trouble getting them to run without raising "No compatible service: io.scif.SCIFIOService" exception.

I'm guessing I have some build/dependency issues - any suggestions?

thanks for any help

Joe
 		 	   		  
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