[ImageJ-devel] [Bug 572] New: while analyzing particles from stack (imported image sequence) analyzes same picture n times instead of stack from n pictures when using anything other then default threshold

bugzilla at fiji.sc bugzilla at fiji.sc
Sun Feb 24 11:55:17 CST 2013


http://fiji.sc/bugzilla/show_bug.cgi?id=572

            Bug ID: 572
           Summary: while analyzing particles from stack (imported image
                    sequence) analyzes same picture n times instead of
                    stack from n pictures when using anything other then
                    default threshold
    Classification: Unclassified
           Product: Fiji
           Version: unspecified
          Hardware: PC
                OS: Windows
            Status: NEW
          Severity: normal
          Priority: P3
         Component: ImageJ2
          Assignee: imagej-devel at imagej.net
          Reporter: robrecht.ebinger at hotmail.com

While trying to analyze some beads (pictures taken with microscope) 
i've been testing out some different threshold for my sequence of pictures.
Whenever i sue something different then default, ImageJ aswell as fiji does not
cycle through the pictures. When i upload a series of 40 pictures, then
threshold it in something different then default. Then click Analyze particles
(with show outline) . The results are 40 times the same, when looking at the
outline is see ImageJ/fiji has taken my last picture and analyzed it 40 times
(and not any of the 39 other slices). Because the default threshold is not the
best for me it ll make analyzing my series pretty hard.

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