[ImageJ-builds] Build failed in Jenkins: ImageJ #3885
jenkins at imagej.net
jenkins at imagej.net
Wed Jan 9 11:14:29 CST 2013
See <http://jenkins.imagej.net/job/ImageJ/3885/>
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[...truncated 3196 lines...]
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Results :
Tests run: 0, Failures: 0, Errors: 0, Skipped: 0
[INFO] [jar:jar {execution: default-jar}]
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/core/log-slf4j/target/ij-log-slf4j-2.0.0-SNAPSHOT.jar
[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
[INFO] [buildnumber:create {execution: default}]
[INFO] [source:jar {execution: default}]
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/core/log-slf4j/target/ij-log-slf4j-2.0.0-SNAPSHOT-sources.jar
[INFO] [install:install {execution: default-install}]
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/log-slf4j/target/ij-log-slf4j-2.0.0-SNAPSHOT.jar to /var/lib/jenkins/.m2/repository/net/imagej/ij-log-slf4j/2.0.0-SNAPSHOT/ij-log-slf4j-2.0.0-SNAPSHOT.jar
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/log-slf4j/target/ij-log-slf4j-2.0.0-SNAPSHOT-sources.jar to /var/lib/jenkins/.m2/repository/net/imagej/ij-log-slf4j/2.0.0-SNAPSHOT/ij-log-slf4j-2.0.0-SNAPSHOT-sources.jar
[INFO]
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] ------------------------------------------------------------------------
[INFO] ImageJ Projects ....................................... SUCCESS [2.749s]
[INFO] ImageJ POM: Core ...................................... SUCCESS [0.020s]
[INFO] ImageJ Core Classes ................................... SUCCESS [8.391s]
[INFO] ImageJ Data Model ..................................... SUCCESS [10.040s]
[INFO] ImageJ Core Options ................................... SUCCESS [0.298s]
[INFO] ImageJ Updater ........................................ SUCCESS [0.017s]
[INFO] ImageJ Updater Core ................................... SUCCESS [3.482s]
[INFO] ImageJ User Interface Framework ....................... SUCCESS [0.381s]
[INFO] ImageJ Core: I/O ...................................... SUCCESS [4.562s]
[INFO] ImageJ POM: Core Commands ............................. SUCCESS [0.019s]
[INFO] ImageJ Core Commands: Application ..................... SUCCESS [0.516s]
[INFO] ImageJ Core Commands: Data ............................ SUCCESS [0.821s]
[INFO] ImageJ Core Tools ..................................... SUCCESS [0.391s]
[INFO] ImageJ Core Commands: Debug ........................... SUCCESS [0.486s]
[INFO] ImageJ Core Commands: Display ......................... SUCCESS [0.430s]
[INFO] ImageJ Core Commands: Sample Image Uploader ........... SUCCESS [0.267s]
[INFO] ImageJ POM: User Interface ............................ SUCCESS [0.015s]
[INFO] ImageJ POM: AWT and Swing UIs ......................... SUCCESS [0.014s]
[INFO] ImageJ Utility Classes: AWT ........................... SUCCESS [0.190s]
[INFO] ImageJ Legacy Bridge .................................. SUCCESS [2.401s]
[INFO] ImageJ POM: Script .................................... SUCCESS [0.015s]
[INFO] Beanshell Scripting For ImageJ ........................ SUCCESS [1.251s]
[INFO] Minimal support for Maven projects .................... SUCCESS [0.283s]
[INFO] A script engine for Java .............................. SUCCESS [0.956s]
[INFO] ImageJ POM: Swing UI .................................. SUCCESS [0.014s]
[INFO] The Script Editor ..................................... SUCCESS [0.577s]
[INFO] ImageJ Core Platforms ................................. SUCCESS [0.236s]
[INFO] ImageJ UI: Common AWT Classes ......................... SUCCESS [0.365s]
[INFO] ImageJ Utility Classes: Swing ......................... SUCCESS [0.252s]
[INFO] ImageJ UI: Swing ...................................... SUCCESS [0.805s]
[INFO] ImageJ UI: Swing Commands ............................. SUCCESS [0.519s]
[INFO] ImageJ UI: Swing Tools ................................ SUCCESS [0.447s]
[INFO] ImageJ Updater (Swing) ................................ SUCCESS [0.473s]
[INFO] ImageJ Updater support for uploading via SSH/SFTP ..... SUCCESS [0.230s]
[INFO] ImageJ Application .................................... SUCCESS [5.228s]
[INFO] ImageJ Logging: SLF4J ................................. SUCCESS [0.216s]
[INFO] ------------------------------------------------------------------------
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESSFUL
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 51 seconds
[INFO] Finished at: Wed Jan 09 11:14:15 CST 2013
[INFO] Final Memory: 89M/1421M
[INFO] ------------------------------------------------------------------------
[workspace] $ /bin/sh -xe /tmp/hudson673555016396508581.sh
+ ../../Fiji-Maven/workspace/bin/incremental-deploy.sh
[/tmp/precompiled.1.jar]
End-of-central-directory signature not found. Either this file is not
a zipfile, or it constitutes one disk of a multi-part archive. In the
latter case the central directory and zipfile comment will be found on
the last disk(s) of this archive.
Deploying core/commands/
[INFO] Scanning for projects...
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ POM: Core Commands
[INFO] task-segment: [deploy]
[INFO] ------------------------------------------------------------------------
[INFO] [buildnumber:create {execution: default}]
[INFO] Checking for local modifications: skipped.
[INFO] Updating project files from SCM: skipped.
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/ImageJ/workspace/core/commands && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/ImageJ/workspace/core/commands
[INFO] Storing buildNumber: 5a9e4dbf80c23a16b263711584718add62662c2a at timestamp: 1357751658782
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/ImageJ/workspace/core/commands && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/ImageJ/workspace/core/commands
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] [site:attach-descriptor {execution: default-attach-descriptor}]
[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
[INFO] [buildnumber:create {execution: default}]
[INFO] [source:jar {execution: default}]
[INFO] [install:install {execution: default-install}]
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/commands/pom.xml to /var/lib/jenkins/.m2/repository/net/imagej/pom-ij-core-commands/2.0.0-SNAPSHOT/pom-ij-core-commands-2.0.0-SNAPSHOT.pom
[INFO] [deploy:deploy {execution: default-deploy}]
[INFO] Retrieving previous build number from imagej.snapshots
Uploading: http://maven.imagej.net/content/repositories/snapshots/net/imagej/pom-ij-core-commands/2.0.0-SNAPSHOT/pom-ij-core-commands-2.0.0-20130109.171420-87.pom
Jan 9, 2013 11:14:20 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
1/1K
1K uploaded (pom-ij-core-commands-2.0.0-20130109.171420-87.pom)
[INFO] Retrieving previous metadata from imagej.snapshots
[INFO] Uploading repository metadata for: 'snapshot net.imagej:pom-ij-core-commands:2.0.0-SNAPSHOT'
Jan 9, 2013 11:14:21 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
[INFO] Retrieving previous metadata from imagej.snapshots
[INFO] Uploading repository metadata for: 'artifact net.imagej:pom-ij-core-commands'
Jan 9, 2013 11:14:21 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESSFUL
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 4 seconds
[INFO] Finished at: Wed Jan 09 11:14:21 CST 2013
[INFO] Final Memory: 40M/638M
[INFO] ------------------------------------------------------------------------
[/tmp/precompiled.1.jar]
End-of-central-directory signature not found. Either this file is not
a zipfile, or it constitutes one disk of a multi-part archive. In the
latter case the central directory and zipfile comment will be found on
the last disk(s) of this archive.
Deploying core/launcher/
[INFO] Scanning for projects...
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ Launcher
[INFO] task-segment: [deploy]
[INFO] ------------------------------------------------------------------------
[INFO] [nar:nar-validate {execution: default-nar-validate}]
[INFO] Using AOL: amd64-Linux-gcc
[INFO] [buildnumber:create {execution: default}]
[INFO] Checking for local modifications: skipped.
[INFO] Updating project files from SCM: skipped.
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher
[INFO] Storing buildNumber: 5a9e4dbf80c23a16b263711584718add62662c2a at timestamp: 1357751665899
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] [nar:nar-download {execution: default-nar-download}]
[INFO] [nar:nar-unpack {execution: default-nar-unpack}]
[INFO] [nar:nar-gnu-configure {execution: default-nar-gnu-configure}]
[INFO] [nar:nar-system-generate {execution: default-nar-system-generate}]
[debug] execute contextualize
[INFO] [resources:resources {execution: default-resources}]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher/src/main/resources
[INFO] [nar:nar-resources {execution: default-nar-resources}]
[INFO] Copied 0 resources
[INFO] [nar:nar-gnu-resources {execution: default-nar-gnu-resources}]
[INFO] [nar:nar-vcproj {execution: default-nar-vcproj}]
[INFO] [compiler:compile {execution: default-compile}]
[INFO] Compiling 3 source files to /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher/target/classes
[INFO] [nar:nar-javah {execution: default-nar-javah}]
[INFO] [nar:nar-gnu-make {execution: default-nar-gnu-make}]
[INFO] [nar:nar-compile {execution: default-nar-compile}]
[INFO] Compiling 1 native files
[ERROR] /data/devel/jenkins/jobs/ImageJ/workspace/core/launcher/src/main/c/ImageJ.c:62:17: fatal error: jni.h: No such file or directory
[ERROR] compilation terminated.
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] NAR: Compile failed
Embedded error: gcc failed with return code 1
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 6 seconds
[INFO] Finished at: Wed Jan 09 11:14:29 CST 2013
[INFO] Final Memory: 43M/653M
[INFO] ------------------------------------------------------------------------
Build step 'Execute shell' marked build as failure
Archiving artifacts
Recording test results
Performance: No threshold configured for making the test unstable
Performance: No threshold configured for making the test failure
Performance: Recording JUnit reports '**/TEST-*.xml'
Performance: Parsing JUnit report file TEST-imagej.core.commands.upload.InteractiveUploadTest.xml
Performance: Parsing JUnit report file TEST-imagej.command.CommandServiceTest.xml
Performance: Parsing JUnit report file TEST-imagej.display.DisplayTest.xml
Performance: Parsing JUnit report file TEST-imagej.menu.ShadowMenuTest.xml
Performance: Parsing JUnit report file TEST-imagej.object.ObjectIndexTest.xml
Performance: Parsing JUnit report file TEST-imagej.object.SortedObjectIndexTest.xml
Performance: Parsing JUnit report file TEST-imagej.plugin.PluginIndexTest.xml
Performance: Parsing JUnit report file TEST-imagej.script.JavascriptTest.xml
Performance: Parsing JUnit report file TEST-imagej.service.ServiceIndexTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.AppUtilsTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.ByteArrayTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.CheckSezpozTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.ClassUtilsTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.ColorRGBTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.DoubleArrayTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.FileUtilsTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.FloatArrayTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.IntArrayTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.LongArrayTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.PrefsTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.ShortArrayTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.UnitUtilsTest.xml
Performance: Parsing JUnit report file TEST-imagej.data.DatasetTest.xml
Performance: Parsing JUnit report file TEST-imagej.data.ExtentsTest.xml
Performance: Parsing JUnit report file TEST-imagej.data.PositionTest.xml
Performance: Parsing JUnit report file TEST-imagej.data.TestCursorSpeeds.xml
Performance: Parsing JUnit report file TEST-imagej.data.display.ImageCanvasTest.xml
Performance: Parsing JUnit report file TEST-imagej.data.overlay.TestBinaryMaskOverlay.xml
Performance: Parsing JUnit report file TEST-imagej.data.table.DefaultResultsTableTest.xml
Performance: Parsing JUnit report file TEST-imagej.legacy.LegacyImageMapTest.xml
Performance: Parsing JUnit report file TEST-imagej.legacy.OverlayHarmonizerTest.xml
Performance: Parsing JUnit report file TEST-imagej.legacy.translate.LegacyUtilsTest.xml
Performance: Parsing JUnit report file TEST-imagej.updater.core.UpdaterTest.xml
Performance: Parsing JUnit report file TEST-imagej.script.BeanshellTest.xml
Performance: Parsing JUnit report file TEST-imagej.script.java.JavaEngineTest.xml
Performance: Parsing JUnit report file TEST-imagej.updater.core.UpdaterGUITest.xml
Performance: File TEST-imagej.core.commands.upload.InteractiveUploadTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.command.CommandServiceTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.display.DisplayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.menu.ShadowMenuTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.object.ObjectIndexTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.object.SortedObjectIndexTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.plugin.PluginIndexTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.script.JavascriptTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.service.ServiceIndexTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.AppUtilsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.ByteArrayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.CheckSezpozTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.ClassUtilsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.ColorRGBTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.DoubleArrayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.FileUtilsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.FloatArrayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.IntArrayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.LongArrayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.PrefsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.ShortArrayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.UnitUtilsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.DatasetTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.ExtentsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.PositionTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.TestCursorSpeeds.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.display.ImageCanvasTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.overlay.TestBinaryMaskOverlay.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.data.table.DefaultResultsTableTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.legacy.LegacyImageMapTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.legacy.OverlayHarmonizerTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.legacy.translate.LegacyUtilsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.updater.core.UpdaterTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.script.BeanshellTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.script.java.JavaEngineTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.updater.core.UpdaterGUITest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
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