[ImageJ-builds] Build failed in Jenkins: Synchronize-and-deploy-IJ1 #1519
jenkins at imagej.net
jenkins at imagej.net
Mon Apr 29 13:33:57 CDT 2013
See <http://jenkins.imagej.net/job/Synchronize-and-deploy-IJ1/1519/>
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[...truncated 383 lines...]
inflating: source/ij/plugin/filter/PlugInFilterRunner.java
inflating: source/ij/plugin/filter/Printer.java
inflating: source/ij/plugin/filter/Profiler.java
inflating: source/ij/plugin/filter/RGBStackSplitter.java
inflating: source/ij/plugin/filter/RankFilters.java
inflating: source/ij/plugin/filter/Resizer.java
inflating: source/ij/plugin/filter/RoiWriter.java
inflating: source/ij/plugin/filter/Rotator.java
inflating: source/ij/plugin/filter/SaltAndPepper.java
inflating: source/ij/plugin/filter/ScaleDialog.java
inflating: source/ij/plugin/filter/Shadows.java
inflating: source/ij/plugin/filter/StackLabeler.java
inflating: source/ij/plugin/filter/ThresholdToSelection.java
inflating: source/ij/plugin/filter/Transformer.java
inflating: source/ij/plugin/filter/Translator.java
inflating: source/ij/plugin/filter/UnsharpMask.java
inflating: source/ij/plugin/filter/Writer.java
inflating: source/ij/plugin/filter/XYWriter.java
inflating: source/ij/plugin/filter/ZAxisProfiler.java
inflating: source/ij/plugin/frame/Channels.java
inflating: source/ij/plugin/frame/ColorPicker.java
inflating: source/ij/plugin/frame/ColorThresholder.java
inflating: source/ij/plugin/frame/ContrastAdjuster.java
inflating: source/ij/plugin/frame/Editor.java
inflating: source/ij/plugin/frame/Fitter.java
inflating: source/ij/plugin/frame/Fonts.java
inflating: source/ij/plugin/frame/LineWidthAdjuster.java
inflating: source/ij/plugin/frame/MemoryMonitor.java
inflating: source/ij/plugin/frame/PasteController.java
inflating: source/ij/plugin/frame/PlugInDialog.java
inflating: source/ij/plugin/frame/PlugInFrame.java
inflating: source/ij/plugin/frame/Recorder.java
inflating: source/ij/plugin/frame/RoiManager.java
inflating: source/ij/plugin/frame/SyncWindows.java
inflating: source/ij/plugin/frame/ThresholdAdjuster.java
inflating: source/ij/plugin/tool/ArrowTool.java
inflating: source/ij/plugin/tool/BrushTool.java
inflating: source/ij/plugin/tool/MacroToolRunner.java
inflating: source/ij/plugin/tool/OverlayBrushTool.java
inflating: source/ij/plugin/tool/PixelInspectionTool.java
inflating: source/ij/plugin/tool/PlugInTool.java
inflating: source/ij/process/AutoThresholder.java
inflating: source/ij/process/BinaryProcessor.java
inflating: source/ij/process/Blitter.java
inflating: source/ij/process/ByteBlitter.java
inflating: source/ij/process/ByteProcessor.java
inflating: source/ij/process/ByteStatistics.java
inflating: source/ij/process/ColorBlitter.java
inflating: source/ij/process/ColorProcessor.java
inflating: source/ij/process/ColorStatistics.java
inflating: source/ij/process/DownsizeTable.java
inflating: source/ij/process/EllipseFitter.java
inflating: source/ij/process/FHT.java
inflating: source/ij/process/FloatBlitter.java
inflating: source/ij/process/FloatPolygon.java
inflating: source/ij/process/FloatProcessor.java
inflating: source/ij/process/FloatStatistics.java
inflating: source/ij/process/FloodFiller.java
inflating: source/ij/process/ImageConverter.java
inflating: source/ij/process/ImageProcessor.java
inflating: source/ij/process/ImageStatistics.java
inflating: source/ij/process/LUT.java
inflating: source/ij/process/MedianCut.java
inflating: source/ij/process/PolygonFiller.java
inflating: source/ij/process/ShortBlitter.java
inflating: source/ij/process/ShortProcessor.java
inflating: source/ij/process/ShortStatistics.java
inflating: source/ij/process/StackConverter.java
inflating: source/ij/process/StackProcessor.java
inflating: source/ij/process/StackStatistics.java
inflating: source/ij/process/TypeConverter.java
inflating: source/ij/text/TextCanvas.java
inflating: source/ij/text/TextPanel.java
inflating: source/ij/text/TextWindow.java
inflating: source/ij/util/ArrayUtil.java
inflating: source/ij/util/DicomTools.java
inflating: source/ij/util/Java2.java
inflating: source/ij/util/StringSorter.java
inflating: source/ij/util/ThreadUtil.java
inflating: source/ij/util/Tools.java
inflating: source/ij/util/WildcardMatch.java
inflating: source/images/about.jpg
inflating: source/images/microscope.gif
inflating: source/macros/AddParticles.txt
inflating: source/macros/ConvertStackToBinary.txt
inflating: source/macros/DeveloperMenuTool.txt
inflating: source/macros/FloodFillTool.txt
inflating: source/macros/HyperStackMaker.txt
inflating: source/macros/LUTMenuTool.txt
inflating: source/macros/Macro_Tool.txt
inflating: source/macros/MoveSelection.txt
inflating: source/macros/Search.txt
inflating: source/macros/SprayCanTool.txt
inflating: source/macros/Stack Tools.txt
inflating: source/macros/StacksMenuTool.txt
inflating: source/macros/StartupMacros.txt
inflating: source/macros/TimeStamp.ijm
inflating: source/plugins/JavaScriptEvaluator.class
inflating: source/plugins/JavaScriptEvaluator.source
inflating: source/plugins/MacAdapter.class
inflating: source/plugins/MacAdapter.source
inflating: source/plugins/MacClipboard.class
inflating: source/plugins/MacClipboard.source
inflating: source/release-notes.html
+ cd source
+ pwd
+ export GIT_WORK_TREE=/data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/tmpCommit/source
+ find ( -name .DS_Store -name .FBCIndex -o -name .FBCLockFolder -o -name .gdb_history ) -exec rm -rf {} ;
find: `./.FBCLockFolder': No such file or directory
+ echo No temporary files removed
No temporary files removed
+ find -type f -print0
+ xargs -0 perl /data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/tools/mac2unix.pl
+ find -type f -print0
+ xargs -0 git update-index --add
+ git write-tree
+ tree=ac91e1f0005737b3cccf0e7ac23824226b709870
+ export GIT_AUTHOR_NAME=Wayne Rasband
+ export GIT_AUTHOR_EMAIL=wsr at nih.gov
+ + git commit-tree ac91e1f0005737b3cccf0e7ac23824226b709870 -p 71a949ba02d03c19a7374f87e18306e8d41e158d
echo ��� 1.47p 29 April 2013
��� Added the Edit>Selection>Scale command.
��� The roiManager("Rename",name) macro function adds "-1" to names
that duplicate existing names.
��� Fixed a bug that caused the Edit>Selection>Rotate command to
not work with composite selections.
��� Fixed a 1.47o regression that caused incorrect display of
measurement results if "Stack position" was enabled in Analyze>
Set Measurements and also caused the List.setMeasurements()
macro function to fail.
+ commit=2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72
+ git update-ref refs/heads/imagej 2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72
+ cd ../..
+ rm -rf tmpCommit tmpIndex
+ dirname tools/jenkins-job.sh
+ sh -x tools/sync-with-imagej.sh
+ URL=git://github.com/fiji/ImageJA
+ BRANCH=refs/heads/master
+ IJ1BRANCH=refs/heads/imagej
+ test a--wayne = a
+ NEED_TO_UPDATE_WORKING_TREE=
+ git config --bool core.bare
+ test false = true
+ git symbolic-ref HEAD
+ test refs/heads/master !=
+ git fetch git://github.com/fiji/ImageJA refs/heads/master
+ ERROR=From git://github.com/fiji/ImageJA
* branch master -> FETCH_HEAD
+ git rev-parse refs/heads/master
+ HEAD=7a5edbf11687244a0b8baef4ef801836c6e8f3b8
+ test -z
+ git push . FETCH_HEAD:refs/heads/master
Everything up-to-date
+ git rev-parse refs/heads/master
+ HEAD=7a5edbf11687244a0b8baef4ef801836c6e8f3b8
+ git rev-parse refs/heads/imagej
+ IJ1HEAD=2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72
+ git merge-base 2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72 7a5edbf11687244a0b8baef4ef801836c6e8f3b8
+ test 2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72 != 71a949ba02d03c19a7374f87e18306e8d41e158d
+ git log -1 --pretty=format:%s 2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72
+ sed -n s/^[^0-9]*\([^ 0-9A-Za-z] \)\?\([1-9][\.0-9]*.\)[^0-9A-Za-z].*$/\2/p
+ VERSION=1.47p
+ git rev-parse --git-dir
+ export GIT_INDEX_FILE=.git/IJ1INDEX
+ git read-tree 2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72
+ MAVEN_URL=http://maven.imagej.net/content/repositories/releases
+ POM_SCIJAVA_URL=http://maven.imagej.net/content/repositories/releases/org/scijava/pom-scijava
+ curl -s http://maven.imagej.net/content/repositories/releases/org/scijava/pom-scijava/maven-metadata.xml
+ sed -n s/.*<latest>\(.*\)<\/latest>.*/\1/p
+ POM_SCIJAVA_VERSION=1.35
+ git show 7a5edbf11687244a0b8baef4ef801836c6e8f3b8:pom.xml
+ sed -e /^\t</s/\(<version>\).*\(<\/version>\)/\11.47p\2/ -e /<parent>/,/<\/pa/s/\(<version>\)[^<]*/\11.35/
+ git hash-object -w .git/IJ1INDEX.pom.new
+ POMHASH=dae4d4b4c27eb45bc098bd1d664e4439178b2b48
+ printf 100644 dae4d4b4c27eb45bc098bd1d664e4439178b2b48 0\tpom.xml\n
+ git rev-parse 7a5edbf11687244a0b8baef4ef801836c6e8f3b8:.gitignore
+ GITIGNORE=beef00d016539f0af7e0cb61be0ef1028cc8db48
+ printf 100644 beef00d016539f0af7e0cb61be0ef1028cc8db48 0\t.gitignore\n
+ git ls-files --stage
+ mv .git/IJ1INDEX .git/IJ1INDEX.old
+ sed -e s~\t\(.*\.java\)$~\tsrc/main/java/\1~ -e s~\tplugins/\(.*\)\.source$~\tsrc/main/java/\1.java~ -e s~\t\(IJ_Props.txt\|macros/\)~\tsrc/main/resources/\1~ -e s~\timages/~\tsrc/main/resources/~ -e s~\t\(MANIFEST.MF\)$~\tsrc/main/resources/META-INF/\1~ -e /\t\(plugins\/.*\.class\|.FBCIndex\|ij\/plugin\/RandomOvals.txt\)$/d
+ git update-index --index-info
+ echo Synchronize with ImageJ 1.47p
+ git write-tree
+ TREE=9399d93004ca5517fad7354a2f945edc97a4ea7f
+ git commit-tree 9399d93004ca5517fad7354a2f945edc97a4ea7f -p 7a5edbf11687244a0b8baef4ef801836c6e8f3b8 -p 2aeefa9d7b6eb8d79bbe660d45652bf62aa2ef72
+ NEWHEAD=9f2ffb4e01c6f9853dfee08c6e9eb4870da4cf19
+ git update-ref -m Synchronize with ImageJ1 refs/heads/master 9f2ffb4e01c6f9853dfee08c6e9eb4870da4cf19 7a5edbf11687244a0b8baef4ef801836c6e8f3b8
+ test -z
+ test -n
+ git push git at dev.imagejdev.org:imageja.git imagej master
+ cd tools
+ git push git at dev.imagejdev.org:imageja.git tools
+ ERR=To git at dev.imagejdev.org:imageja.git
71a949b..2aeefa9 imagej -> imagej
7a5edbf..9f2ffb4 master -> master
Everything up-to-date
+ git push git at github.com:fiji/ImageJA imagej master
+ cd tools
+ git push git at github.com:fiji/ImageJA tools
+ ERR=To git at github.com:fiji/ImageJA
71a949b..2aeefa9 imagej -> imagej
7a5edbf..9f2ffb4 master -> master
Everything up-to-date
+ git push dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja imagej master
+ ERR=remote:
remote: This repository has moved to a new location. This project was upgraded to the new SourceForge platform, so a one-time move of this repo was performed. There are instructions for switching to the new location below. You can no longer commit to the repo at this location.[K
remote:
remote: Please update your configuration with the following commands:[K
remote:
remote: git remote set-url origin "ssh://USERNAME@git.code.sf.net/p/imageja/code"[K
remote:
remote: (Older versions of git may need to use git remote rm/add.)[K
remote:
remote: More information available at: https://sourceforge.net/p/forge/community-docs/Repository%20Upgrade%20FAQ/[K
To dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja
! [remote rejected] imagej -> imagej (pre-receive hook declined)
! [remote rejected] master -> master (pre-receive hook declined)
error: failed to push some refs to 'dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja'
+ echo remote:
remote: This repository has moved to a new location. This project was upgraded to the new SourceForge platform, so a one-time move of this repo was performed. There are instructions for switching to the new location below. You can no longer commit to the repo at this location.[K
remote:
remote: Please update your configuration with the following commands:[K
remote:
remote: git remote set-url origin "ssh://USERNAME@git.code.sf.net/p/imageja/code"[K
remote:
remote: (Older versions of git may need to use git remote rm/add.)[K
remote:
remote: More information available at: https://sourceforge.net/p/forge/community-docs/Repository%20Upgrade%20FAQ/[K
To dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja
! [remote rejected] imagej -> imagej (pre-receive hook declined)
! [remote rejected] master -> master (pre-receive hook declined)
error: failed to push some refs to 'dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja'Could not push
remote:
remote: This repository has moved to a new location. This project was upgraded to the new SourceForge platform, so a one-time move of this repo was performed. There are instructions for switching to the new location below. You can no longer commit to the repo at this location.[K
remote:
remote: Please update your configuration with the following commands:[K
remote:
remote: git remote set-url origin "ssh://USERNAME@git.code.sf.net/p/imageja/code"[K
remote:
remote: (Older versions of git may need to use git remote rm/add.)[K
remote:
remote: More information available at: https://sourceforge.net/p/forge/community-docs/Repository%20Upgrade%20FAQ/[K
To dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja
! [remote rejected] imagej -> imagej (pre-receive hook declined)
! [remote rejected] master -> master (pre-receive hook declined)
error: failed to push some refs to 'dscho at imageja.git.sourceforge.net:/gitroot/imageja/imageja'Could not push
+ exit 1
Build step 'Execute shell' marked build as failure
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