[ImageJ-builds] Build failed in Jenkins: Synchronize-and-deploy-IJ1 #1518

jenkins at imagej.net jenkins at imagej.net
Mon Apr 29 12:05:32 CDT 2013


See <http://jenkins.imagej.net/job/Synchronize-and-deploy-IJ1/1518/>

------------------------------------------
[...truncated 299 lines...]
  inflating: source/ij/plugin/NewPlugin.java  
  inflating: source/ij/plugin/NextImageOpener.java  
  inflating: source/ij/plugin/Options.java  
  inflating: source/ij/plugin/Orthogonal_Views.java  
  inflating: source/ij/plugin/OverlayCommands.java  
  inflating: source/ij/plugin/OverlayLabels.java  
  inflating: source/ij/plugin/PGM_Reader.java  
  inflating: source/ij/plugin/PNG_Writer.java  
  inflating: source/ij/plugin/PNM_Writer.java  
  inflating: source/ij/plugin/PlugIn.java  
  inflating: source/ij/plugin/PlugInInterpreter.java  
  inflating: source/ij/plugin/PluginInstaller.java  
  inflating: source/ij/plugin/Projector.java  
  inflating: source/ij/plugin/ProxySettings.java  
  inflating: source/ij/plugin/RGBStackConverter.java  
  inflating: source/ij/plugin/RGBStackMerge.java  
  inflating: source/ij/plugin/RandomOvals.txt  
  inflating: source/ij/plugin/Raw.java  
  inflating: source/ij/plugin/RectToolOptions.java  
  inflating: source/ij/plugin/Resizer.java  
  inflating: source/ij/plugin/ResultsSorter.java  
  inflating: source/ij/plugin/RoiEnlarger.java  
  inflating: source/ij/plugin/RoiReader.java  
  inflating: source/ij/plugin/RoiRotator.java  
  inflating: source/ij/plugin/RoiScaler.java  
  inflating: source/ij/plugin/ScaleBar.java  
  inflating: source/ij/plugin/Scaler.java  
  inflating: source/ij/plugin/ScreenGrabber.java  
  inflating: source/ij/plugin/Selection.java  
  inflating: source/ij/plugin/SimpleCommands.java  
  inflating: source/ij/plugin/Slicer.java  
  inflating: source/ij/plugin/SpecifyROI.java  
  inflating: source/ij/plugin/StackCombiner.java  
  inflating: source/ij/plugin/StackEditor.java  
  inflating: source/ij/plugin/StackInserter.java  
  inflating: source/ij/plugin/StackMaker.java  
  inflating: source/ij/plugin/StackReducer.java  
  inflating: source/ij/plugin/StackReverser.java  
  inflating: source/ij/plugin/StackWriter.java  
  inflating: source/ij/plugin/Stack_Statistics.java  
  inflating: source/ij/plugin/Straightener.java  
  inflating: source/ij/plugin/SubHyperstackMaker.java  
  inflating: source/ij/plugin/SubstackMaker.java  
  inflating: source/ij/plugin/SurfacePlotter.java  
  inflating: source/ij/plugin/TextFileReader.java  
  inflating: source/ij/plugin/TextReader.java  
  inflating: source/ij/plugin/TextWriter.java  
  inflating: source/ij/plugin/ThreadLister.java  
  inflating: source/ij/plugin/Thresholder.java  
  inflating: source/ij/plugin/Timer.java  
  inflating: source/ij/plugin/URLOpener.java  
  inflating: source/ij/plugin/WandToolOptions.java  
  inflating: source/ij/plugin/WindowOrganizer.java  
  inflating: source/ij/plugin/XYCoordinates.java  
  inflating: source/ij/plugin/XY_Reader.java  
  inflating: source/ij/plugin/ZProjector.java  
  inflating: source/ij/plugin/Zoom.java  
  inflating: source/ij/plugin/filter/AVI_Writer.java  
  inflating: source/ij/plugin/filter/Analyzer.java  
  inflating: source/ij/plugin/filter/BackgroundSubtracter.java  
  inflating: source/ij/plugin/filter/Benchmark.java  
  inflating: source/ij/plugin/filter/Binary.java  
  inflating: source/ij/plugin/filter/CalibrationBar.java  
  inflating: source/ij/plugin/filter/Calibrator.java  
  inflating: source/ij/plugin/filter/Convolver.java  
  inflating: source/ij/plugin/filter/Duplicater.java  
  inflating: source/ij/plugin/filter/EDM.java  
  inflating: source/ij/plugin/filter/ExtendedPlugInFilter.java  
  inflating: source/ij/plugin/filter/FFTCustomFilter.java  
  inflating: source/ij/plugin/filter/FFTFilter.java  
  inflating: source/ij/plugin/filter/Filler.java  
  inflating: source/ij/plugin/filter/Filters.java  
  inflating: source/ij/plugin/filter/FractalBoxCounter.java  
  inflating: source/ij/plugin/filter/GaussianBlur.java  
  inflating: source/ij/plugin/filter/ImageMath.java  
  inflating: source/ij/plugin/filter/ImageProperties.java  
  inflating: source/ij/plugin/filter/Info.java  
  inflating: source/ij/plugin/filter/LineGraphAnalyzer.java  
  inflating: source/ij/plugin/filter/LutApplier.java  
  inflating: source/ij/plugin/filter/LutViewer.java  
  inflating: source/ij/plugin/filter/MaximumFinder.java  
  inflating: source/ij/plugin/filter/ParticleAnalyzer.java  
  inflating: source/ij/plugin/filter/PlugInFilter.java  
  inflating: source/ij/plugin/filter/PlugInFilterRunner.java  
  inflating: source/ij/plugin/filter/Printer.java  
  inflating: source/ij/plugin/filter/Profiler.java  
  inflating: source/ij/plugin/filter/RGBStackSplitter.java  
  inflating: source/ij/plugin/filter/RankFilters.java  
  inflating: source/ij/plugin/filter/Resizer.java  
  inflating: source/ij/plugin/filter/RoiWriter.java  
  inflating: source/ij/plugin/filter/Rotator.java  
  inflating: source/ij/plugin/filter/SaltAndPepper.java  
  inflating: source/ij/plugin/filter/ScaleDialog.java  
  inflating: source/ij/plugin/filter/Shadows.java  
  inflating: source/ij/plugin/filter/StackLabeler.java  
  inflating: source/ij/plugin/filter/ThresholdToSelection.java  
  inflating: source/ij/plugin/filter/Transformer.java  
  inflating: source/ij/plugin/filter/Translator.java  
  inflating: source/ij/plugin/filter/UnsharpMask.java  
  inflating: source/ij/plugin/filter/Writer.java  
  inflating: source/ij/plugin/filter/XYWriter.java  
  inflating: source/ij/plugin/filter/ZAxisProfiler.java  
  inflating: source/ij/plugin/frame/Channels.java  
  inflating: source/ij/plugin/frame/ColorPicker.java  
  inflating: source/ij/plugin/frame/ColorThresholder.java  
  inflating: source/ij/plugin/frame/ContrastAdjuster.java  
  inflating: source/ij/plugin/frame/Editor.java  
  inflating: source/ij/plugin/frame/Fitter.java  
  inflating: source/ij/plugin/frame/Fonts.java  
  inflating: source/ij/plugin/frame/LineWidthAdjuster.java  
  inflating: source/ij/plugin/frame/MemoryMonitor.java  
  inflating: source/ij/plugin/frame/PasteController.java  
  inflating: source/ij/plugin/frame/PlugInDialog.java  
  inflating: source/ij/plugin/frame/PlugInFrame.java  
  inflating: source/ij/plugin/frame/Recorder.java  
  inflating: source/ij/plugin/frame/RoiManager.java  
  inflating: source/ij/plugin/frame/SyncWindows.java  
  inflating: source/ij/plugin/frame/ThresholdAdjuster.java  
  inflating: source/ij/plugin/tool/ArrowTool.java  
  inflating: source/ij/plugin/tool/BrushTool.java  
  inflating: source/ij/plugin/tool/MacroToolRunner.java  
  inflating: source/ij/plugin/tool/OverlayBrushTool.java  
  inflating: source/ij/plugin/tool/PixelInspectionTool.java  
  inflating: source/ij/plugin/tool/PlugInTool.java  
  inflating: source/ij/process/AutoThresholder.java  
  inflating: source/ij/process/BinaryProcessor.java  
  inflating: source/ij/process/Blitter.java  
  inflating: source/ij/process/ByteBlitter.java  
  inflating: source/ij/process/ByteProcessor.java  
  inflating: source/ij/process/ByteStatistics.java  
  inflating: source/ij/process/ColorBlitter.java  
  inflating: source/ij/process/ColorProcessor.java  
  inflating: source/ij/process/ColorStatistics.java  
  inflating: source/ij/process/DownsizeTable.java  
  inflating: source/ij/process/EllipseFitter.java  
  inflating: source/ij/process/FHT.java  
  inflating: source/ij/process/FloatBlitter.java  
  inflating: source/ij/process/FloatPolygon.java  
  inflating: source/ij/process/FloatProcessor.java  
  inflating: source/ij/process/FloatStatistics.java  
  inflating: source/ij/process/FloodFiller.java  
  inflating: source/ij/process/ImageConverter.java  
  inflating: source/ij/process/ImageProcessor.java  
  inflating: source/ij/process/ImageStatistics.java  
  inflating: source/ij/process/LUT.java  
  inflating: source/ij/process/MedianCut.java  
  inflating: source/ij/process/PolygonFiller.java  
  inflating: source/ij/process/ShortBlitter.java  
  inflating: source/ij/process/ShortProcessor.java  
  inflating: source/ij/process/ShortStatistics.java  
  inflating: source/ij/process/StackConverter.java  
  inflating: source/ij/process/StackProcessor.java  
  inflating: source/ij/process/StackStatistics.java  
  inflating: source/ij/process/TypeConverter.java  
  inflating: source/ij/text/TextCanvas.java  
  inflating: source/ij/text/TextPanel.java  
  inflating: source/ij/text/TextWindow.java  
  inflating: source/ij/util/ArrayUtil.java  
  inflating: source/ij/util/DicomTools.java  
  inflating: source/ij/util/Java2.java  
  inflating: source/ij/util/StringSorter.java  
  inflating: source/ij/util/ThreadUtil.java  
  inflating: source/ij/util/Tools.java  
  inflating: source/ij/util/WildcardMatch.java  
  inflating: source/images/about.jpg  
  inflating: source/images/microscope.gif  
  inflating: source/macros/AddParticles.txt  
  inflating: source/macros/ConvertStackToBinary.txt  
  inflating: source/macros/DeveloperMenuTool.txt  
  inflating: source/macros/FloodFillTool.txt  
  inflating: source/macros/HyperStackMaker.txt  
  inflating: source/macros/LUTMenuTool.txt  
  inflating: source/macros/Macro_Tool.txt  
  inflating: source/macros/MoveSelection.txt  
  inflating: source/macros/Search.txt  
  inflating: source/macros/SprayCanTool.txt  
  inflating: source/macros/Stack Tools.txt  
  inflating: source/macros/StacksMenuTool.txt  
  inflating: source/macros/StartupMacros.txt  
  inflating: source/macros/TimeStamp.ijm  
  inflating: source/plugins/JavaScriptEvaluator.class  
  inflating: source/plugins/JavaScriptEvaluator.source  
  inflating: source/plugins/MacAdapter.class  
  inflating: source/plugins/MacAdapter.source  
  inflating: source/plugins/MacClipboard.class  
  inflating: source/plugins/MacClipboard.source  
  inflating: source/release-notes.html  
+ cd source
+ pwd
+ export GIT_WORK_TREE=/data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/tmpCommit/source
+ find ( -name .DS_Store -name .FBCIndex -o -name .FBCLockFolder -o -name .gdb_history ) -exec rm -rf {} ;
find: `./.FBCLockFolder': No such file or directory
+ echo No temporary files removed
No temporary files removed
+ find -type f -print0
+ xargs -0 perl /data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/tools/mac2unix.pl
+ find -type f -print0
+ xargs -0 git update-index --add
+ git write-tree
+ tree=ac91e1f0005737b3cccf0e7ac23824226b709870
+ export GIT_AUTHOR_NAME=Wayne Rasband
+ export GIT_AUTHOR_EMAIL=wsr at nih.gov
+ + gitecho commit-tree ac91e1f0005737b3cccf0e7ac23824226b709870 -p 71a949ba02d03c19a7374f87e18306e8d41e158d
   ��� 1.47p 29 April 2013
      ��� Added the Edit>Selection>Scale command.
      ��� The roiManager("Rename",name) macro function adds "-1" to names
        that duplicate existing names.
      ��� Fixed a bug that caused the Edit>Selection>Rotate command to
        not work with composite selections.
      ��� Fixed a 1.47o regression that caused incorrect display of
        measurement results if "Stack position" was enabled in Analyze>
        Set Measurements and also caused the List.setMeasurements()
        macro function to fail.
+ commit=17d46d8280ae6b02484c26d80bd172391a4a22c8
+ git update-ref refs/heads/imagej 17d46d8280ae6b02484c26d80bd172391a4a22c8
+ cd ../..
+ rm -rf tmpCommit tmpIndex
+ dirname tools/jenkins-job.sh
+ sh -x tools/sync-with-imagej.sh
+ URL=git://github.com/fiji/ImageJA
+ BRANCH=refs/heads/master
+ IJ1BRANCH=refs/heads/imagej
+ test a--wayne = a
+ NEED_TO_UPDATE_WORKING_TREE=
+ git config --bool core.bare
+ test false = true
+ git symbolic-ref HEAD
+ test refs/heads/master != 
+ git fetch git://github.com/fiji/ImageJA refs/heads/master
+ ERROR=From git://github.com/fiji/ImageJA
 * branch            master     -> FETCH_HEAD
+ git rev-parse refs/heads/master
+ HEAD=7a5edbf11687244a0b8baef4ef801836c6e8f3b8
+ test -z 
+ git push . FETCH_HEAD:refs/heads/master
To .
 ! [rejected]        FETCH_HEAD -> master (non-fast-forward)
error: failed to push some refs to '.'
To prevent you from losing history, non-fast-forward updates were rejected
Merge the remote changes (e.g. 'git pull') before pushing again.  See the
'Note about fast-forwards' section of 'git push --help' for details.
+ die Could not pull refs/heads/master
+ echo Could not pull refs/heads/master
Could not pull refs/heads/master
+ exit 1
+ echo Could not update 'master'
Could not update 'master'
+ exit 1
Build step 'Execute shell' marked build as failure



More information about the ImageJ-builds mailing list