[ImageJ-builds] Build failed in Jenkins: Fiji-daily #408
jenkins at imagej.net
jenkins at imagej.net
Fri Jul 6 21:05:09 CDT 2012
See <http://jenkins.imagej.net/job/Fiji-daily/408/changes>
Changes:
[Curtis Rueden] Script editor: allow customization of the git path
------------------------------------------
[...truncated 5763 lines...]
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:179: warning: unmappable character for encoding ASCII
renderStereo = new Button("Render stereo pair (\u0394="+IJ.d2s(VJRenderViewStereo.stereoDifference,1)+"??)");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:179: warning: unmappable character for encoding ASCII
renderStereo = new Button("Render stereo pair (\u0394="+IJ.d2s(VJRenderViewStereo.stereoDifference,1)+"??)");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:247: warning: unmappable character for encoding ASCII
rotField = createXYZField(params1, "Rotation(??):", sxyz, 1);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:247: warning: unmappable character for encoding ASCII
rotField = createXYZField(params1, "Rotation(??):", sxyz, 1);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:260: warning: unmappable character for encoding ASCII
cineNField = createTextField(params1, "Cine total rotation(??):", "360", 1);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:260: warning: unmappable character for encoding ASCII
cineNField = createTextField(params1, "Cine total rotation(??):", "360", 1);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:261: warning: unmappable character for encoding ASCII
cineField = createTextField(params1, "Cine frame increment(??):", "10", 1);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/VolumeJ/VJUserInterface.java:261: warning: unmappable character for encoding ASCII
cineField = createTextField(params1, "Cine frame increment(??):", "10", 1);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/bijnum/SVDC.java:117: warning: unmappable character for encoding ASCII
*matrix X into a product UDV?? where ...
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/bijnum/SVDC.java:117: warning: unmappable character for encoding ASCII
*matrix X into a product UDV?? where ...
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:363: warning: unmappable character for encoding ASCII
g.drawString("" + 180 + "??", 0, YMARGIN);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:363: warning: unmappable character for encoding ASCII
g.drawString("" + 180 + "??", 0, YMARGIN);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:372: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (0 / binWidth)], 2) + "??)", (int) (xScale * 0 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:372: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (0 / binWidth)], 2) + "??)", (int) (xScale * 0 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:373: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (1 / binWidth)], 2) + "??)", (int) (xScale * 1 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:373: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (1 / binWidth)], 2) + "??)", (int) (xScale * 1 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:374: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (2 / binWidth)], 2) + "??)", (int) (xScale * 2 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:374: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (2 / binWidth)], 2) + "??)", (int) (xScale * 2 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:375: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (3 / binWidth)], 2) + "??)", (int) (xScale * 3 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:375: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (3 / binWidth)], 2) + "??)", (int) (xScale * 3 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:376: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (4 / binWidth)], 2) + "??)", (int) (xScale * 4 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:376: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (4 / binWidth)], 2) + "??)", (int) (xScale * 4 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:377: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (5 / binWidth)], 2) + "??)", (int) (xScale * 5 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJError.java:377: warning: unmappable character for encoding ASCII
g.drawString("(" + IJ.d2s(binPsi[(int) (5 / binWidth)], 2) + "??)", (int) (xScale * 5 / binWidth) + XMARGIN, y);
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:651: warning: unmappable character for encoding ASCII
posLabel.setText(x + ", " + y + ": psi = " + fe.psi(x, y)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:651: warning: unmappable character for encoding ASCII
posLabel.setText(x + ", " + y + ": psi = " + fe.psi(x, y)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:658: warning: unmappable character for encoding ASCII
alphaField.setText("" + IJ.d2s(flow.getAlphaDeg(x, y), 2)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:658: warning: unmappable character for encoding ASCII
alphaField.setText("" + IJ.d2s(flow.getAlphaDeg(x, y), 2)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:685: warning: unmappable character for encoding ASCII
alphaField.setText("avg orientation: " + IJ.d2s(flow.averageAlpha(), 2)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:685: warning: unmappable character for encoding ASCII
alphaField.setText("avg orientation: " + IJ.d2s(flow.averageAlpha(), 2)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:693: warning: unmappable character for encoding ASCII
alphaField.setText("avg psi: " + IJ.d2s(((FlowJError) display).average(imp.getRoi()), 2)+"??");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/FlowJ_/src/main/java/FlowJ/FlowJUserInterface.java:693: warning: unmappable character for encoding ASCII
alphaField.setText("avg psi: " + IJ.d2s(((FlowJError) display).average(imp.getRoi()), 2)+"??");
^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
38 warnings
Building plugins/Video_Editing.jar <- src-plugins/Video_Editing/
Compiling 10 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Video_Editing
Building plugins/Fiji_Package_Maker.jar <- src-plugins/Fiji_Packag...
Compiling 6 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Package_Maker
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Package_Maker/src/main/java/fiji/packaging/TarBz2Packager.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/Helmholtz_Analysis.jar <- src-plugins/Helmholtz_A...
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Helmholtz_Analysis
Building jars/imagescience.jar <- src-plugins/imagescience/
Building jars/VectorString.jar <- jars/ij.jar jars/Jama.jar java/l...
Building in modules/TrakEM2/
Building VectorString.jar <- ini/trakem2/vector/SkinMaker.java ini...
Leaving modules/TrakEM2/
Building jars/jfreechart.jar <-
Building jars/jcommon.jar <-
Building jars/imglib-algorithms.jar <- jars/Jama.jar jars/imglib.j...
Building jars/imglib-scripting.jar <- jars/ij.jar jars/imglib.jar ...
Compiling 94 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib1/scripting
Building plugins/Dichromacy_.jar <- src-plugins/Dichromacy_/
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Dichromacy_
Building plugins/3D_Blob_Segmentation.jar <- src-plugins/3D_Blob_S...
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/3D_Blob_Segmentation
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/3D_Blob_Segmentation/src/main/java/ij3d/segmentation/Blob_Segmentation_in_3D.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/3D_Blob_Segmentation/src/main/java/ij3d/segmentation/Blob_Segmentation_in_3D.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/mpicbg_.jar <- jars/ij.jar jars/mpicbg.jar module...
Building in modules/mpicbg/
Building mpicbg_.jar <- mpicbg/ij/plugin/AbstractBlockFilter.java ...
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: ./modules/mpicbg/SIFT_Align.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Leaving modules/mpicbg/
Building jars/weave_jy2java.jar <- src-plugins/weave_jy2java/
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/weave_jy2java
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/weave_jy2java/src/main/java/fiji/scripting/Weaver.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/Interactive_3D_Surface_Plot.jar <- src-plugins/In...
Compiling 12 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:297: warning: unmappable character for encoding ASCII
// IJ.run("Set Scale...", "distance=1.001 known=100 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:297: warning: unmappable character for encoding ASCII
// IJ.run("Set Scale...", "distance=1.001 known=100 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:298: warning: unmappable character for encoding ASCII
// //IJ.run("Set Scale...", "distance=2.2 known=5 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:298: warning: unmappable character for encoding ASCII
// //IJ.run("Set Scale...", "distance=2.2 known=5 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:299: warning: unmappable character for encoding ASCII
IJ.run("Set Scale...", "distance=12 known=100 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:299: warning: unmappable character for encoding ASCII
IJ.run("Set Scale...", "distance=12 known=100 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:300: warning: unmappable character for encoding ASCII
// //IJ.run("Set Scale...", "distance=30 known=0.5 pixel=1 unit=??m");
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Interactive_3D_Surface_Plot/src/main/java/Interactive_3D_Surface_Plot.java:300: warning: unmappable character for encoding ASCII
// //IJ.run("Set Scale...", "distance=30 known=0.5 pixel=1 unit=??m");
^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
8 warnings
Building plugins/Jython_Interpreter.jar <- src-plugins/Jython_Inte...
Building jars/commons-math.jar <- modules/commons-math/
Building plugins/Lasso_and_Blow_Tool.jar <- src-plugins/Lasso_and_...
Compiling 5 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Lasso_and_Blow_Tool
Building plugins/Fiji_Plugins.jar <- src-plugins/Fiji_Plugins/
Building plugins/Feature_Detection.jar <- src-plugins/Feature_Dete...
Compiling 3 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Feature_Detection
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/JRuby_Interpreter.jar <- src-plugins/JRuby_Interp...
Building plugins/Image_5D.jar <- jars/ij.jar modules/image5d/
Building plugins/Color_Inspector_3D.jar <- src-plugins/Color_Inspe...
Compiling 4 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Inspector_3D
The system is out of resources.
Consult the following stack trace for details.
java.lang.OutOfMemoryError: Java heap space
at com.sun.tools.javac.util.Name.fromChars(Name.java:129)
at com.sun.tools.javac.util.Name.fromString(Name.java:158)
at com.sun.tools.javac.util.Name.fromString(Name.java:164)
at com.sun.tools.javac.util.Name$Table.fromString(Name.java:543)
at com.sun.tools.javac.jvm.ClassReader.includeClassFile(ClassReader.java:2123)
at com.sun.tools.javac.jvm.ClassReader.fillIn(ClassReader.java:2274)
at com.sun.tools.javac.jvm.ClassReader.fillIn(ClassReader.java:2192)
at com.sun.tools.javac.jvm.ClassReader.complete(ClassReader.java:1896)
at com.sun.tools.javac.code.Symbol.complete(Symbol.java:400)
at com.sun.tools.javac.jvm.ClassReader.completeOwners(ClassReader.java:1908)
at com.sun.tools.javac.jvm.ClassReader.complete(ClassReader.java:1887)
at com.sun.tools.javac.code.Symbol.complete(Symbol.java:400)
at com.sun.tools.javac.code.Symbol$ClassSymbol.complete(Symbol.java:782)
at com.sun.tools.javac.code.Type$ClassType.complete(Type.java:702)
at com.sun.tools.javac.code.Type$ClassType.getTypeArguments(Type.java:636)
at com.sun.tools.javac.code.Type$ClassType.isErroneous(Type.java:659)
at com.sun.tools.javac.comp.Check.checkNonCyclicInternal(Check.java:1513)
at com.sun.tools.javac.comp.Check.checkNonCyclicInternal(Check.java:1520)
at com.sun.tools.javac.comp.Check.checkNonCyclic(Check.java:1476)
at com.sun.tools.javac.comp.Attr.checkBase(Attr.java:543)
at com.sun.tools.javac.comp.Attr.attribBase(Attr.java:510)
at com.sun.tools.javac.comp.MemberEnter.complete(MemberEnter.java:871)
at com.sun.tools.javac.code.Symbol.complete(Symbol.java:400)
at com.sun.tools.javac.code.Symbol$ClassSymbol.complete(Symbol.java:782)
at com.sun.tools.javac.code.Symbol$ClassSymbol.flags(Symbol.java:724)
at com.sun.tools.javac.comp.Resolve.isAccessible(Resolve.java:195)
at com.sun.tools.javac.comp.Resolve.findMemberType(Resolve.java:883)
at com.sun.tools.javac.comp.Resolve.findType(Resolve.java:946)
at com.sun.tools.javac.comp.Resolve.findIdent(Resolve.java:996)
at com.sun.tools.javac.comp.Resolve.resolveIdent(Resolve.java:1172)
at com.sun.tools.javac.comp.Attr.visitIdent(Attr.java:1762)
at com.sun.tools.javac.tree.JCTree$JCIdent.accept(JCTree.java:1679)
Compile error
at fiji.build.Fake.callJavac(Fake.java:556)
at fiji.build.MiniMaven$POM.build(MiniMaven.java:492)
at fiji.build.MiniMaven$POM.buildJar(MiniMaven.java:423)
at fiji.build.SubFake.action(SubFake.java:169)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:267)
at fiji.build.Fake.main(Fake.java:55)
Compile error
at fiji.build.Fake.callJavac(Fake.java:556)
at fiji.build.MiniMaven$POM.build(MiniMaven.java:492)
at fiji.build.MiniMaven$POM.buildJar(MiniMaven.java:423)
at fiji.build.SubFake.action(SubFake.java:169)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:267)
at fiji.build.Fake.main(Fake.java:55)
Compile error
in rule plugins/Color_Inspector_3D.jar <- src-plugins/Color_Inspe...
in rule all <- ImageJ fiji jars/ij.jar plugins/loci_tools.jar jar...
Build step 'Execute shell' marked build as failure
Archiving artifacts
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