[ImageJ-builds] Build failed in Jenkins: Fiji-daily #407
jenkins at imagej.net
jenkins at imagej.net
Fri Jul 6 00:05:20 CDT 2012
See <http://jenkins.imagej.net/job/Fiji-daily/407/>
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[...truncated 5072 lines...]
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/DogSegmenterTestDrive.java:28: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/DogSegmenterTestDrive.java:28: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/DogSegmenterTestDrive.java:29: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/DogSegmenterTestDrive.java:29: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/DogSegmenterTestDrive.java:30: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/DogSegmenterTestDrive.java:30: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:43: warning: unmappable character for encoding ASCII
final float RADIUS = 5; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:43: warning: unmappable character for encoding ASCII
final float RADIUS = 5; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:45: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:45: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:46: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:46: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:47: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/SpotDisplayer3DTestDrive.java:47: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:26: warning: unmappable character for encoding ASCII
final float RADIUS = 5; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:26: warning: unmappable character for encoding ASCII
final float RADIUS = 5; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:28: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:28: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:29: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:29: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:30: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/PeakPickerSegmenterTestDrive.java:30: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:31: warning: unmappable character for encoding ASCII
final float RADIUS = 5; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:31: warning: unmappable character for encoding ASCII
final float RADIUS = 5; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:33: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:33: warning: unmappable character for encoding ASCII
final float WIDTH = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:34: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:34: warning: unmappable character for encoding ASCII
final float HEIGHT = 100; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:35: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tests/LogSegmenterTestDrive.java:35: warning: unmappable character for encoding ASCII
final float DEPTH = 50; // ??m
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:40: warning: unmappable character for encoding ASCII
* <code>p = 3 ?? ?? ?? |f1-f2| / (f1+f2)</code>, where <code>??</code> is the factor
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TrackMate_/src/main/java/fiji/plugin/trackmate/tracking/LAPUtils.java:48: warning: unmappable character for encoding ASCII
* <li> All penalties are summed, to form <code>P = (1 + ??? p )</code>
^
100 warnings
Building plugins/Javascript_.jar <- src-plugins/Javascript_/
Building plugins/Color_Inspector_3D.jar <- src-plugins/Color_Inspe...
Compiling 4 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Inspector_3D
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Inspector_3D/src/main/java/Color_Inspector_3D.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Building jars/imglib2-io.jar <- plugins/loci_tools.jar jars/imglib...
Compiling 10 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/io
Building plugins/Fiji_Plugins.jar <- src-plugins/Fiji_Plugins/
Building plugins/PIV_analyser.jar <- src-plugins/PIV_analyser/
Compiling 4 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser/src/main/java/PIV_analyser.java:65: warning: unmappable character for encoding ASCII
* situations and after photo-ablation - <cite>Supatto, W.; D??barre, D. &
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser/src/main/java/PIV_analyser.java:65: warning: unmappable character for encoding ASCII
* situations and after photo-ablation - <cite>Supatto, W.; D??barre, D. &
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser/src/main/java/PIV_analyser.java:759: warning: unmappable character for encoding ASCII
IJ.showStatus( String.format("Velocity: %5.1f px/frame - Direction %3.0f??", v, alpha));
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser/src/main/java/PIV_analyser.java:759: warning: unmappable character for encoding ASCII
IJ.showStatus( String.format("Velocity: %5.1f px/frame - Direction %3.0f??", v, alpha));
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser/src/main/java/PIV_analyser.java:858: warning: unmappable character for encoding ASCII
IJ.showStatus(String.format("Velocity: %5.1f px/frame - Direction %3.0f??",
^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/PIV_analyser/src/main/java/PIV_analyser.java:858: warning: unmappable character for encoding ASCII
IJ.showStatus(String.format("Velocity: %5.1f px/frame - Direction %3.0f??",
^
6 warnings
Building plugins/Sync_Win.jar <- src-plugins/Sync_Win/
Compiling 12 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Sync_Win
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Sync_Win/src/main/java/Sync_Windows.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/BalloonSegmentation_.jar <- src-plugins/BalloonSe...
Compiling 8 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/BalloonSegmentation_
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/BalloonSegmentation_/src/main/java/BalloonSegmentation_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/Descriptor_based_registration.jar <- src-plugins/...
Compiling 16 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Descriptor_based_registration
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Descriptor_based_registration/src/main/java/process/Matching.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building plugins/TransformJ_.jar <- src-plugins/TransformJ_/
Compiling 14 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TransformJ_
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/TransformJ_/src/main/java/TJ_Matrix.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building jars/jcommon.jar <-
Building jars/jfreechart.jar <-
Building jars/pal-optimization.jar <- src-plugins/pal-optimization/
Building jars/jzlib.jar <-
Building jars/fiji-lib.jar <- src-plugins/fiji-lib/
Building jars/VIB-lib.jar <- jars/ij.jar jars/Jama.jar jars/junit....
Building jars/VectorString.jar <- jars/ij.jar jars/Jama.jar java/l...
Building in modules/TrakEM2/
Building VectorString.jar <- ini/trakem2/vector/SkinMaker.java ini...
Leaving modules/TrakEM2/
Building jars/postgresql.jar <-
Building plugins/mpicbg_.jar <- jars/ij.jar jars/mpicbg.jar module...
Building in modules/mpicbg/
Building mpicbg_.jar <- mpicbg/ij/plugin/AbstractBlockFilter.java ...
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: ./modules/mpicbg/SIFT_Align.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Leaving modules/mpicbg/
Building jars/jai_codec.jar <-
Building jars/jai_core.jar <-
Building plugins/TrakEM2_.jar <- jars/ij.jar jars/jai_core.jar jar...
Building in modules/TrakEM2/
Building TrakEM2_.jar <- ini/trakem2/imaging/filters/LUTRed.java m...
The system is out of resources.
Consult the following stack trace for details.
java.lang.OutOfMemoryError: Java heap space
at com.sun.tools.javac.util.Position$LineMapImpl.build(Position.java:153)
at com.sun.tools.javac.util.Position.makeLineMap(Position.java:77)
at com.sun.tools.javac.parser.Scanner.getLineMap(Scanner.java:1120)
at com.sun.tools.javac.main.JavaCompiler.parse(JavaCompiler.java:584)
at com.sun.tools.javac.main.JavaCompiler.parse(JavaCompiler.java:622)
at com.sun.tools.javac.main.JavaCompiler.parseFiles(JavaCompiler.java:878)
at com.sun.tools.javac.main.JavaCompiler.compile(JavaCompiler.java:796)
at com.sun.tools.javac.main.Main.compile(Main.java:388)
at com.sun.tools.javac.main.Main.compile(Main.java:308)
at com.sun.tools.javac.main.Main.compile(Main.java:299)
at com.sun.tools.javac.Main.compile(Main.java:100)
at sun.reflect.GeneratedMethodAccessor1.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at fiji.build.Fake.callJavac(Fake.java:553)
at fiji.build.Fake.compileJavas(Fake.java:639)
at fiji.build.Rule.compileJavas(Rule.java:409)
at fiji.build.CompileJar.action(CompileJar.java:56)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.fakeOrMake(Fake.java:1131)
at fiji.build.SubFake.fakeOrMake(SubFake.java:203)
at fiji.build.SubFake.action(SubFake.java:164)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:267)
at fiji.build.Fake.main(Fake.java:55)
Compile error
at fiji.build.Fake.callJavac(Fake.java:556)
at fiji.build.Fake.compileJavas(Fake.java:639)
at fiji.build.Rule.compileJavas(Rule.java:409)
at fiji.build.CompileJar.action(CompileJar.java:56)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.fakeOrMake(Fake.java:1131)
at fiji.build.SubFake.fakeOrMake(SubFake.java:203)
at fiji.build.SubFake.action(SubFake.java:164)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:267)
at fiji.build.Fake.main(Fake.java:55)
Fake failed: Compile error
in rule TrakEM2_.jar <- ini/trakem2/imaging/filters/LUTRed.java m...
in rule plugins/TrakEM2_.jar <- jars/ij.jar jars/jai_core.jar jar...
in rule all <- ImageJ fiji jars/ij.jar plugins/loci_tools.jar jar...
Build step 'Execute shell' marked build as failure
Archiving artifacts
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