[ImageJ-builds] Build failed in Jenkins: fiji-windows-full #77

Thu Jul 5 17:08:47 CDT 2012

See <https://qa.nest-initiative.org/job/fiji-windows-full/77/changes>

Changes:

[johannes.schindelin] Revert javac's Infer.java to initial OpenJDK7's

[johannes.schindelin] javac: fix compile problems with ImgLib

[johannes.schindelin] Precompile javac

[johannes.schindelin] Compile all of ImgLib with MiniMaven

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[...truncated 169 lines...]
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/Retrotranslator
Submodule 'Retrotranslator' () registered for path 'modules/Retrotranslator'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/TrakEM2
Submodule 'TrakEM2' () registered for path 'modules/TrakEM2'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/batik
Submodule 'batik' () registered for path 'modules/batik'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/bio-formats
Submodule 'bio-formats' () registered for path 'modules/bio-formats'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/clojure
Submodule 'clojure' () registered for path 'modules/clojure'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/commons-math
Submodule 'commons-math' () registered for path 'modules/commons-math'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/ij-plugins
Submodule 'ij-plugins' () registered for path 'modules/ij-plugins'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/image5d
Submodule 'modules/imagej5d' () registered for path 'modules/image5d'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/imagej2
Submodule 'modules/imagej2' () registered for path 'modules/imagej2'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/imglib
Submodule 'imglib' () registered for path 'modules/imglib'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/javassist
Submodule 'modules/javassist' () registered for path 'modules/javassist'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/jsch
Submodule 'jsch' () registered for path 'modules/jsch'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/junit
Submodule 'junit' () registered for path 'modules/junit'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/jython
Submodule 'jython' () registered for path 'modules/jython'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/mpicbg
Submodule 'mpicbg' () registered for path 'modules/mpicbg'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/tcljava
Submodule 'tcljava' () registered for path 'modules/tcljava'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/weka
Submodule 'weka' () registered for path 'modules/weka'
+ git submodule foreach 'git clean -dfx'
Entering 'java/win64'
Entering 'modules/AutoComplete'
Removing ant-classes/
Removing autocomplete.jar
Removing dist/
Entering 'modules/ImageJA'
Removing target/
Entering 'modules/RSyntaxTextArea'
Removing ant-classes/
Removing dist/
Removing rsyntaxtextarea.jar
Entering 'modules/Retrotranslator'
Entering 'modules/TrakEM2'
Removing VectorString.jar
Removing build/
Entering 'modules/batik'
Removing batik-1.8pre/
Removing batik.jar
Removing classes/
Entering 'modules/bio-formats'
Removing artifacts/
Removing components/bio-formats/build/
Removing components/bio-formats/target/
Removing components/common/build/
Removing components/common/target/
Removing components/forks/jai/build/
Removing components/forks/jai/target/
Removing components/forks/mdbtools/build/
Removing components/forks/mdbtools/target/
Removing components/forks/poi/build/
Removing components/forks/poi/target/
Removing components/loci-plugins/build/
Removing components/loci-plugins/target/
Removing components/metakit/build/
Removing components/metakit/target/
Removing components/ome-xml/build/
Removing components/ome-xml/target/
Removing components/scifio/build/
Removing components/scifio/target/
Removing components/stubs/lwf-stubs/build/
Removing components/stubs/lwf-stubs/target/
Removing loci_tools.jar
Entering 'modules/clojure'
Entering 'modules/commons-math'
Removing target/
Entering 'modules/ij-plugins'
Removing ij-ImageIO_.jar
Entering 'modules/image5d'
Removing target/
Entering 'modules/imagej2'
Removing core/core/target/
Removing core/data/target/
Removing core/ext/target/
Removing core/io/target/
Removing core/legacy/target/
Removing core/options/target/
Removing core/platform/target/
Removing core/plugins/app/target/
Removing core/plugins/data/target/
Removing core/plugins/debug/target/
Removing core/plugins/display/target/
Removing core/plugins/misc/target/
Removing core/tools/target/
Removing core/ui/target/
Removing core/updater/core/target/
Removing core/updater/ssh/target/
Removing ui/app/target/
Removing ui/awt-swing/common/target/
Removing ui/awt-swing/swing/ext/target/
Removing ui/awt-swing/swing/plugins/target/
Removing ui/awt-swing/swing/tools/target/
Removing ui/awt-swing/swing/ui-base/target/
Removing ui/awt-swing/swing/ui-sdi/target/
Removing ui/awt-swing/swing/updater/target/
Removing ui/awt-swing/util/target/
Removing ui/platform-macosx/target/
Entering 'modules/imglib'
Removing imglib-algorithms.jar
Removing imglib-ij.jar
Removing imglib-io.jar
Removing imglib-scripting.jar
Removing imglib.jar
Removing imglib1/algorithms/target/
Removing imglib1/core/target/
Removing imglib1/ij/target/
Removing imglib1/io/target/
Removing imglib2-algorithms.jar
Removing imglib2-ij.jar
Removing imglib2.jar
Removing imglib2/algorithms/core/target/
Removing imglib2/core/target/
Removing imglib2/ij/target/
Removing imglib2/io/target/
Removing imglib2/ops/target/
Entering 'modules/javassist'
Removing target/
Entering 'modules/jsch'
Removing build/
Removing dist/
Removing jsch.jar
Entering 'modules/junit'
Removing junit.jar
Removing junit4.5/
Removing target/
Entering 'modules/jython'
Removing jython.jar
Removing jython/build/
Removing jython/dist/
Removing jython/tests/data/initializer/SyspathAppendingInitializer.class
Removing python-d5876b1/
Removing unpacked/
Entering 'modules/mpicbg'
Removing mpicbg.jar
Removing mpicbg_.jar
Entering 'modules/tcljava'
Removing jacl.jar
Entering 'modules/weka'
Removing weka.jar
Removing weka/build/
Removing weka/dist/
[fiji-windows-full] $ sh -xe C:\Users\jenkins\AppData\Local\Temp\hudson8051016623913500932.sh
+ export PATH=/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ PATH=/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ sh -x ./Build.sh -Dminimaven.updateinterval=1 -- verbose=true
+ set -a
++ dirname ./Build.sh
+ CWD=.
+ PATHSEP=:
++ uname -s
+ UNAME_S=MINGW32_NT-6.1
+ case "$UNAME_S" in
++ cd .
++ pwd
+ CWD=/c/jenkins/workspace/fiji-windows-full
+ PATHSEP=';'
+ case "$PROCESSOR_ARCHITEW6432" in
+ platform=win64
+ java_submodule=win64
+ exe=.exe
+ test -n win64
+ test -z ''
++ get_java_home
++ test -d ''
++ test -n win64
++ test -d /c/jenkins/workspace/fiji-windows-full/java/win64
+++ ls -t /c/jenkins/workspace/fiji-windows-full/java/win64
+++ head -n 1
++ echo /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ JAVA_HOME=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -z win64
+ test -f /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/lib/tools.jar
+ test -f /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/../lib/tools.jar
+ case "$JAVA_HOME" in
+ test -n /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/jre
+ export PATH=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ PATH=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ : build fake.jar, making sure javac is in the PATH
++ get_java_home
++ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
++ echo /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
++ get_java_home
++ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
++ echo /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ PATH=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin:/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/../bin
+ ensure_fake_is_built
++ need_to_build_fake
++ cd /c/jenkins/workspace/fiji-windows-full
++ test -f jars/fake.jar
++ echo YesPlease
++ return
++ return
+ test -z YesPlease
+ cd /c/jenkins/workspace/fiji-windows-full
+ : blow previous builds away
+ rm -rf build/jars/fake/
+ mkdir -p build/jars/fake/
+ : compile classes
++ find src-plugins/fake/ -name '*.java'
+ java -jar precompiled/javac.jar -source 1.5 -target 1.5 -classpath precompiled/javac.jar -d build/jars/fake/ src-plugins/fake/src/main/java/fiji/build/All.java src-plugins/fake/src/main/java/fiji/build/ByteCodeAnalyzer.java src-plugins/fake/src/main/java/fiji/build/CompileClass.java src-plugins/fake/src/main/java/fiji/build/CompileCProgram.java src-plugins/fake/src/main/java/fiji/build/CompileJar.java src-plugins/fake/src/main/java/fiji/build/CompileNativeLibrary.java src-plugins/fake/src/main/java/fiji/build/CopyJar.java src-plugins/fake/src/main/java/fiji/build/ExecuteProgram.java src-plugins/fake/src/main/java/fiji/build/Fake.java src-plugins/fake/src/main/java/fiji/build/FakeException.java src-plugins/fake/src/main/java/fiji/build/GlobFilter.java src-plugins/fake/src/main/java/fiji/build/JarClassLoader.java src-plugins/fake/src/main/java/fiji/build/MiniMaven.java src-plugins/fake/src/main/java/fiji/build/MultiIterable.java src-plugins/fake/src/main/java/fiji/build/ObsoleteClassFiles.java src-plugins/fake/src/main/java/fiji/build/ParallelMaker.java src-plugins/fake/src/main/java/fiji/build/Parser.java src-plugins/fake/src/main/java/fiji/build/Rule.java src-plugins/fake/src/main/java/fiji/build/Special.java src-plugins/fake/src/main/java/fiji/build/StreamDumper.java src-plugins/fake/src/main/java/fiji/build/SubFake.java src-plugins/fake/src/main/java/fiji/build/Util.java
Invalid or corrupt jarfile precompiled/javac.jar
+ java -classpath 'build/jars/fake/;precompiled/javac.jar' fiji.build.Fake jars/fake.jar-rebuild
java.lang.NoClassDefFoundError: fiji/build/Fake
Caused by: java.lang.ClassNotFoundException: fiji.build.Fake
	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
Could not find the main class: fiji.build.Fake.  Program will exit.
Exception in thread "main" + echo 'Could not build Fiji Build'
Could not build Fiji Build
+ exit 1
Build step 'Execute shell' marked build as failure