[ImageJ-builds] Build failed in Jenkins: fiji-windows-full #76
Jenkins Daemon
jenkins at qa.nest-initiative.org
Thu Jul 5 13:08:07 CDT 2012
See <https://qa.nest-initiative.org/job/fiji-windows-full/76/changes>
Changes:
[sapristi] Soft-commit TrakEM2: small performance fix and correctness fix for CachingThread.
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Compiling 57 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\3D_Viewer\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\AnalyzeSkeleton_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\Skeletonize3D_\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB-lib\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB_\target\classes;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\batik.jar;C>:\jenkins\workspace\fiji-windows-full\modules\commons-math\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\classes;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\classes;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\core\target\classes;C:\Users\jenkins\.m2\repository\java3d\j3d-core\1.5.2\j3d-core-1.5.2.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core-utils\1.5.2\j3d-core-utils-1.5.2.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\jcommon.jar;c>:\jenkins\workspace\fiji-windows-full\jars\jfreechart.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\junit.jar;c>:\jenkins\workspace\fiji-windows-full\jars\jzlib.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\pal-optimization\target\classes;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\tools.jar;C>:\Users\jenkins\.m2\repository\java3d\vecmath\1.5.2\vecmath-1.5.2.jar, -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Albert_Test.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\AnalyzeTracings_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\AutoPoint.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\AutoSearchThread.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\AutoTracerCanvas.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Auto_Tracer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\ClarifyingKeyListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\CMTKInversePathTransformer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Connectivity.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\CreateTracingVolume_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\EigenResultsDouble.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\EigenResultsFloat.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Fill.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\FillerProgressCallback.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\FillerThread.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\FillWindow.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\FittingProgress.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\GraphNode.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\InteractiveTracerCanvas.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Load_Auto_Traces.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\MultiTaskProgress.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\NearPoint.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\NeuriteTracerResultsDialog.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\NewAnalyzeTracings_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\NormalPlaneCanvas.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Path.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathAndFillListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathAndFillManager.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathColorsCanvas.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathDownsampler.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathFitter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathResult.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathTransformer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PathWindow.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PointInImage.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\PointSelectionBehavior.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\QueueJumpingKeyListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SearchInterface.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SearchNode.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SearchProgressCallback.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SearchThread.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\ShollAnalysisDialog.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SimpleNeuriteTracer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Simple_Neurite_Tracer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SinglePathsGraph.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SNTEvent.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SNTListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SWCImportOptionsDialog.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SWCPoint.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\SwingSafeResult.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Test2DTracing.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Test3DTracing.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\Test_Single_Voxel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\TraceLoaderListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\TracerCanvas.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\TracerThread.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\src\main\java\tracing\TubularGeodesicsTracer.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Simple_Neurite_Tracer\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\3D_Viewer\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\AnalyzeSkeleton_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\Skeletonize3D_\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB-lib\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB_\target\classes;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\batik.jar;C>:\jenkins\workspace\fiji-windows-full\modules\commons-math\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\classes;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\classes;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\core\target\classes;C:\Users\jenkins\.m2\repository\java3d\j3d-core\1.5.2\j3d-core-1.5.2.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core-utils\1.5.2\j3d-core-utils-1.5.2.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\jcommon.jar;c>:\jenkins\workspace\fiji-windows-full\jars\jfreechart.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\junit.jar;c>:\jenkins\workspace\fiji-windows-full\jars\jzlib.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\pal-optimization\target\classes;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/jars\tools.jar;C>:\Users\jenkins\.m2\repository\java3d\vecmath\1.5.2\vecmath-1.5.2.jar
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Building (fiji.build.SubFake) plugins/TrakEM2_.jar <- jars/ij.jar ...
Building in modules/TrakEM2/
Checking prerequisites of (fiji.build.CompileJar) TrakEM2_.jar <- ini/trakem2/imagi...
TrakEM2_.jar is not up-to-date because of jars/ij.jar
Building (fiji.build.CompileJar) TrakEM2_.jar <- ini/trakem2/imagi...
Compiling .java files: javac -encoding UTF8 -d <https://qa.nest-initiative.org/job/fiji-windows-full/ws/.\modules\TrakEM2\build\TrakEM2_> -source 1.5 -target 1.5 -classpath jars/ij.jar;jars/jai_core.jar;jars/jai_codec.jar;jars/VectorString.jar;jars/postgresql.jar;jars/jcommon.jar;jars/jfreechart.jar;jars/edu_mines_jtk.jar;jars/VIB-lib.jar;plugins/VIB_.jar;jars/mpicbg.jar;plugins/loci_tools.jar;plugins/bUnwarpJ_.jar;plugins/level_sets.jar;plugins/Fiji_Plugins.jar;jars/Jama.jar;jars/imglib.jar;jars/imglib-algorithms.jar;jars/imglib-ij.jar;plugins/Simple_Neurite_Tracer.jar;plugins/3D_Viewer.jar;plugins/Lasso_and_Blow_Tool.jar;plugins/mpicbg_.jar;java/win64/jdk1.6.0_24/jre/lib/ext/j3dcore.jar;java/win64/jdk1.6.0_24/jre/lib/ext/j3dutils.jar;java/win64/jdk1.6.0_24/jre/lib/ext/vecmath.jar -Djava.ext.dirs=<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\lib\ext;C>:\Windows\Sun\Java\lib\ext .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTRed.java .\modules\TrakEM2\mpicbg\trakem2\transform\TranslationModel2D.java .\modules\TrakEM2\ini\trakem2\display\Region.java .\modules\TrakEM2\ini\trakem2\display\NonLinearTransformMode.java .\modules\TrakEM2\ini\trakem2\display\Mode.java .\modules\TrakEM2\ini\trakem2\imaging\BinaryInterpolation2D.java .\modules\TrakEM2\ini\trakem2\display\inspect\ShapeProxy.java .\modules\TrakEM2\ini\trakem2\analysis\Vertex.java .\modules\TrakEM2\ini\trakem2\utils\TaskOnEDT.java .\modules\TrakEM2\ini\trakem2\display\AffineTransformMode.java .\modules\TrakEM2\bunwarpj\trakem2\transform\CubicBSplineTransform.java .\modules\TrakEM2\ini\trakem2\imaging\ImagePreprocessor.java .\modules\TrakEM2\ini\trakem2\display\Overlay.java .\modules\TrakEM2\ini\trakem2\display\AreaContainer.java .\modules\TrakEM2\ini\trakem2\imaging\LayerStack.java .\modules\TrakEM2\ini\trakem2\persistence\StaleFiles.java .\modules\TrakEM2\ini\trakem2\display\DLabel.java .\modules\TrakEM2\mpi\fruitfly\math\Quicksortable.java .\modules\TrakEM2\ini\trakem2\display\Stack.java .\modules\TrakEM2\ini\trakem2\persistence\TMLHandler.java .\modules\TrakEM2\ini\trakem2\display\Selection.java .\modules\TrakEM2\ini\trakem2\display\Displayable.java .\modules\TrakEM2\ini\trakem2\tree\DNDTree.java .\modules\TrakEM2\ini\trakem2\persistence\DownsamplerMipMaps.java .\modules\TrakEM2\ini\trakem2\persistence\ProjectTiler.java .\modules\TrakEM2\ini\trakem2\display\graphics\MultiplyARGBComposite.java .\modules\TrakEM2\ini\trakem2\display\VectorData.java .\modules\TrakEM2\ini\trakem2\utils\StopWatch.java .\modules\TrakEM2\ini\trakem2\utils\FieldMapView.java .\modules\TrakEM2\ini\trakem2\imaging\Blending.java .\modules\TrakEM2\ini\trakem2\display\Bucket.java .\modules\TrakEM2\ini\trakem2\utils\ReconstructArea.java .\modules\TrakEM2\ini\trakem2\persistence\FSLoader.java .\modules\TrakEM2\ini\trakem2\imaging\LazyVirtualStack.java .\modules\TrakEM2\mpi\fruitfly\math\datastructures\FloatArray2D.java .\modules\TrakEM2\ini\trakem2\tree\TrakEM2MLParser.java .\modules\TrakEM2\ini\trakem2\tree\ProjectThing.java .\modules\TrakEM2\ini\trakem2\display\MipMapImage.java .\modules\TrakEM2\mpicbg\trakem2\align\GenericAffineTile2D.java .\modules\TrakEM2\ini\trakem2\io\ImageFileFilter.java .\modules\TrakEM2\ini\trakem2\imaging\FloatProcessorT2.java .\modules\TrakEM2\ini\trakem2\display\RollingPanel.java .\modules\TrakEM2\ini\trakem2\New_Project.java .\modules\TrakEM2\ini\trakem2\tree\RenameThingStep.java .\modules\TrakEM2\ini\trakem2\io\CoordinateTransformXML.java .\modules\TrakEM2\ini\trakem2\utils\OptionPanel.java .\modules\TrakEM2\ini\trakem2\persistence\Loader.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTCyan.java .\modules\TrakEM2\ini\trakem2\display\Bucketable.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTBlue.java .\modules\TrakEM2\ini\trakem2\utils\TypedHashMap.java .\modules\TrakEM2\ini\trakem2\display\VectorDataTransform.java .\modules\TrakEM2\mpicbg\trakem2\align\AffineTile2D.java .\modules\TrakEM2\ini\trakem2\io\ImageSaver.java .\modules\TrakEM2\ini\trakem2\imaging\FastIntegralImage.java .\modules\TrakEM2\ini\trakem2\display\graphics\DifferenceARGBComposite.java .\modules\TrakEM2\mpi\fruitfly\registration\ImageFilter.java .\modules\TrakEM2\ini\trakem2\analysis\Centrality.java .\modules\TrakEM2\ini\trakem2\display\Paintable.java .\modules\TrakEM2\ini\trakem2\display\AreaTree.java .\modules\TrakEM2\ini\trakem2\imaging\filters\GaussianBlur.java .\modules\TrakEM2\ini\trakem2\display\Layer.java .\modules\TrakEM2\ini\trakem2\display\GroupingMode.java .\modules\TrakEM2\ini\trakem2\display\AreaWrapper.java .\modules\TrakEM2\ini\trakem2\utils\StdOutWindow.java .\modules\TrakEM2\ini\trakem2\display\Line3D.java .\modules\TrakEM2\ini\trakem2\io\RawMipMaps.java .\modules\TrakEM2\mpicbg\trakem2\transform\ExportedTile.java .\modules\TrakEM2\ini\trakem2\tree\TransferableNode.java .\modules\TrakEM2\ini\trakem2\imaging\Segmentation.java .\modules\TrakEM2\ini\trakem2\parallel\TaskFactory.java .\modules\TrakEM2\ini\trakem2\display\Dissector.java .\modules\TrakEM2\ini\trakem2\display\ManualAlignMode.java .\modules\TrakEM2\mpicbg\trakem2\transform\TranslationModel3D.java .\modules\TrakEM2\ini\trakem2\io\ImageFileHeader.java .\modules\TrakEM2\ini\trakem2\imaging\ContrastPlot.java .\modules\TrakEM2\ini\trakem2\display\Treeline.java .\modules\TrakEM2\ini\trakem2\display\Pipe.java .\modules\TrakEM2\ini\trakem2\tree\TemplateThing.java .\modules\TrakEM2\ini\trakem2\display\TreeConnectorsView.java .\modules\TrakEM2\ini\trakem2\utils\Saver.java .\modules\TrakEM2\ini\trakem2\display\FakeImagePlus.java .\modules\TrakEM2\ini\trakem2\display\AbstractRepaintThread.java .\modules\TrakEM2\mpicbg\trakem2\transform\TransformMeshMappingWithMasks.java .\modules\TrakEM2\ini\trakem2\scripting\PatchScript.java .\modules\TrakEM2\ini\trakem2\analysis\Compare.java .\modules\TrakEM2\ini\trakem2\tree\ProjectTree.java .\modules\TrakEM2\ini\trakem2\display\ImageData.java .\modules\TrakEM2\ini\trakem2\utils\M.java .\modules\TrakEM2\ini\trakem2\imaging\filters\SubtractBackground.java .\modules\TrakEM2\mpi\fruitfly\general\MultiThreading.java .\modules\TrakEM2\ini\trakem2\display\LayerSet.java .\modules\TrakEM2\ini\trakem2\display\FakeImageWindow.java .\modules\TrakEM2\ini\trakem2\display\DisplayableChooser.java .\modules\TrakEM2\ini\trakem2\imaging\filters\NormalizeLocalContrast.java .\modules\TrakEM2\mpicbg\trakem2\align\Align.java .\modules\TrakEM2\ini\trakem2\display\DisplayCanvas.java .\modules\TrakEM2\ini\trakem2\imaging\P.java .\modules\TrakEM2\ini\trakem2\display\d3d\ControlClickBehavior.java .\modules\TrakEM2\ini\trakem2\utils\IJError.java .\modules\TrakEM2\ini\trakem2\tree\AbstractTreeTransferHandler.java .\modules\TrakEM2\mpicbg\trakem2\transform\InvertibleCoordinateTransform.java .\modules\TrakEM2\mpicbg\trakem2\align\SimilarityTile2D.java .\modules\TrakEM2\mpicbg\trakem2\transform\AffineModel2D.java .\modules\TrakEM2\ini\trakem2\display\Node.java .\modules\TrakEM2\ini\trakem2\display\DisplayablePanel.java .\modules\TrakEM2\ini\trakem2\display\Tree.java .\modules\TrakEM2\ini\trakem2\imaging\filters\RankFilter.java .\modules\TrakEM2\ini\trakem2\display\LayerPanel.java .\modules\TrakEM2\ini\trakem2\display\Ball.java .\modules\TrakEM2\mpicbg\trakem2\transform\DTD.java .\modules\TrakEM2\ini\trakem2\utils\Search.java .\modules\TrakEM2\ini\trakem2\display\graphics\SubtractARGBComposite.java .\modules\TrakEM2\ini\trakem2\tree\LayerThing.java .\modules\TrakEM2\ini\trakem2\tree\DTDParser.java .\modules\TrakEM2\ini\trakem2\utils\ProjectToolbar.java .\modules\TrakEM2\ini\trakem2\display\graphics\ColorYCbCrComposite.java .\modules\TrakEM2\mpicbg\trakem2\align\Util.java .\modules\TrakEM2\ini\trakem2\display\inspect\InspectPatchTrianglesMode.java .\modules\TrakEM2\mpicbg\trakem2\align\RegularizedAffineLayerAlignment.java .\modules\TrakEM2\ini\trakem2\display\SnapshotPanel.java .\modules\TrakEM2\ini\trakem2\utils\Filter.java .\modules\TrakEM2\ini\trakem2\imaging\filters\EqualizeHistogram.java .\modules\TrakEM2\ini\trakem2\imaging\filters\EnhanceContrast.java .\modules\TrakEM2\ini\trakem2\display\Taggable.java .\modules\TrakEM2\ini\trakem2\utils\Dispatcher.java .\modules\TrakEM2\ini\trakem2\io\AmiraImporter.java .\modules\TrakEM2\ini\trakem2\display\Channel.java .\modules\TrakEM2\ini\trakem2\utils\AreaUtils.java .\modules\TrakEM2\ini\trakem2\display\paint\USHORTPaint.java .\modules\TrakEM2\ini\trakem2\parallel\Process.java .\modules\TrakEM2\ini\trakem2\imaging\filters\IFilter.java .\modules\TrakEM2\ini\trakem2\utils\DNDInsertImage.java .\modules\TrakEM2\mpicbg\trakem2\util\Triple.java .\modules\TrakEM2\mpi\fruitfly\math\datastructures\FloatArray4D.java .\modules\TrakEM2\ini\trakem2\display\Display.java .\modules\TrakEM2\ini\trakem2\utils\Montage.java .\modules\TrakEM2\ini\trakem2\imaging\filters\DefaultMinAndMax.java .\modules\TrakEM2\mpicbg\trakem2\transform\CoordinateTransform.java .\modules\TrakEM2\ini\trakem2\utils\IntegerField.java .\modules\TrakEM2\ini\trakem2\persistence\IntegralImageMipMaps.java .\modules\TrakEM2\ini\trakem2\utils\Utils.java .\modules\TrakEM2\ini\trakem2\utils\BigBrother.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTMagenta.java .\modules\TrakEM2\mpicbg\trakem2\transform\ExportUnsignedShort.java .\modules\TrakEM2\mpicbg\trakem2\align\AbstractAffineTile2D.java .\modules\TrakEM2\mpicbg\trakem2\transform\MovingLeastSquaresTransform2.java .\modules\TrakEM2\ini\trakem2\utils\Worker.java .\modules\TrakEM2\mpicbg\trakem2\align\AlignLayersTask.java .\modules\TrakEM2\ini\trakem2\Open_DB_Project.java .\modules\TrakEM2\ini\trakem2\imaging\ContrastEnhancerWrapper.java .\modules\TrakEM2\ini\trakem2\io\LoggingInputStream.java .\modules\TrakEM2\ini\trakem2\persistence\Cache.java .\modules\TrakEM2\ini\trakem2\io\XMLFileFilter.java .\modules\TrakEM2\lenscorrection\DistortionCorrectionTask.java .\modules\TrakEM2\ini\trakem2\display\YesNoDialog.java .\modules\TrakEM2\ini\trakem2\display\graphics\GraphicsSource.java .\modules\TrakEM2\mpicbg\trakem2\align\ElasticLayerAlignment.java .\modules\TrakEM2\ini\trakem2\display\graphics\DefaultGraphicsSource.java .\modules\TrakEM2\ini\trakem2\display\Display3D.java .\modules\TrakEM2\ini\trakem2\display\d3d\Display3DGUI.java .\modules\TrakEM2\ini\trakem2\New_DB_Project.java .\modules\TrakEM2\mpicbg\trakem2\transform\SimilarityModel2D.java .\modules\TrakEM2\ini\trakem2\persistence\XMLOptions.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTCustom.java .\modules\TrakEM2\ini\trakem2\display\AreaList.java .\modules\TrakEM2\mpicbg\trakem2\align\AlignTask.java .\modules\TrakEM2\lenscorrection\NonLinearTransform.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTGreen.java .\modules\TrakEM2\mpicbg\trakem2\align\TranslationTile2D.java .\modules\TrakEM2\ini\trakem2\tree\LayerTree.java .\modules\TrakEM2\ini\trakem2\parallel\CountingTaskFactory.java .\modules\TrakEM2\ini\trakem2\Project.java .\modules\TrakEM2\ini\trakem2\utils\Vector3.java .\modules\TrakEM2\ini\trakem2\display\Tag.java .\modules\TrakEM2\lenscorrection\PolynomialModel2D.java .\modules\TrakEM2\mpi\fruitfly\general\ArrayConverter.java .\modules\TrakEM2\mpicbg\trakem2\transform\CoordinateTransformList.java .\modules\TrakEM2\mpicbg\trakem2\transform\AffineModel3D.java .\modules\TrakEM2\ini\trakem2\display\TransformationStep.java .\modules\TrakEM2\ini\trakem2\io\NeuroML.java .\modules\TrakEM2\ini\trakem2\display\paint\USHORTPaintContext.java .\modules\TrakEM2\ini\trakem2\utils\RedPhone.java .\modules\TrakEM2\ini\trakem2\display\Coordinate.java .\modules\TrakEM2\ini\trakem2\persistence\ImageBytes.java .\modules\TrakEM2\ini\trakem2\imaging\PatchStack.java .\modules\TrakEM2\ini\trakem2\display\ZDisplayable.java .\modules\TrakEM2\ini\trakem2\tree\Thing.java .\modules\TrakEM2\ini\trakem2\persistence\FilePathRepair.java .\modules\TrakEM2\ini\trakem2\display\AbstractOffscreenThread.java .\modules\TrakEM2\mpicbg\trakem2\align\ElasticMontage.java .\modules\TrakEM2\mpicbg\trakem2\transform\TransformMesh.java .\modules\TrakEM2\ini\trakem2\imaging\filters\CLAHE.java .\modules\TrakEM2\ini\trakem2\io\RagMipMaps.java .\modules\TrakEM2\ini\trakem2\display\graphics\TestGraphicsSource.java .\modules\TrakEM2\mpi\fruitfly\math\General.java .\modules\TrakEM2\mpi\fruitfly\general\ImageArrayConverter.java .\modules\TrakEM2\ini\trakem2\display\FreeHandProfile.java .\modules\TrakEM2\mpicbg\trakem2\align\AbstractElasticAlignment.java .\modules\TrakEM2\mpicbg\trakem2\transform\RigidModel2D.java .\modules\TrakEM2\ini\trakem2\persistence\DBObject.java .\modules\TrakEM2\mpicbg\trakem2\align\RigidTile2D.java .\modules\TrakEM2\ini\trakem2\display\Polyline.java .\modules\TrakEM2\lenscorrection\Distortion_Correction.java .\modules\TrakEM2\ini\trakem2\display\Patch.java .\modules\TrakEM2\ini\trakem2\imaging\StitchingTEM.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTYellow.java .\modules\TrakEM2\ini\trakem2\tree\TemplateTree.java .\modules\TrakEM2\ini\trakem2\imaging\filters\Normalize.java .\modules\TrakEM2\ini\trakem2\display\ImageJCommandListener.java .\modules\TrakEM2\mpi\fruitfly\math\datastructures\FloatArray3D.java .\modules\TrakEM2\ini\trakem2\display\DoStep.java .\modules\TrakEM2\mpicbg\trakem2\transform\MovingLeastSquaresTransform.java .\modules\TrakEM2\ini\trakem2\Open_Project.java .\modules\TrakEM2\ini\trakem2\imaging\filters\FilterEditor.java .\modules\TrakEM2\ini\trakem2\display\Profile.java .\modules\TrakEM2\mpicbg\trakem2\util\Downsampler.java .\modules\TrakEM2\ini\trakem2\utils\Merger.java .\modules\TrakEM2\ini\trakem2\display\DisplayNavigator.java .\modules\TrakEM2\ini\trakem2\tree\DefaultTreeTransferHandler.java .\modules\TrakEM2\ini\trakem2\ControlWindow.java .\modules\TrakEM2\mpi\fruitfly\registration\CrossCorrelation2D.java .\modules\TrakEM2\ini\trakem2\analysis\Graph.java .\modules\TrakEM2\ini\trakem2\persistence\DBLoader.java .\modules\TrakEM2\ini\trakem2\tree\TitledThing.java .\modules\TrakEM2\ini\trakem2\utils\CachingThread.java .\modules\TrakEM2\ini\trakem2\utils\Lock.java .\modules\TrakEM2\mpicbg\trakem2\align\TileConfiguration.java .\modules\TrakEM2\ini\trakem2\display\DefaultMode.java .\modules\TrakEM2\mpi\fruitfly\math\datastructures\FloatArray.java .\modules\TrakEM2\ini\trakem2\imaging\filters\Invert.java .\modules\TrakEM2\ini\trakem2\display\ContrastAdjustmentMode.java .\modules\TrakEM2\ini\trakem2\plugin\TPlugIn.java .\modules\TrakEM2\ini\trakem2\display\graphics\AddARGBComposite.java .\modules\TrakEM2\ini\trakem2\imaging\filters\ResetMinAndMax.java .\modules\TrakEM2\ini\trakem2\imaging\PhaseCorrelationCalculator.java .\modules\TrakEM2\ini\trakem2\utils\Render.java .\modules\TrakEM2\mpicbg\trakem2\transform\InvertibleCoordinateTransformList.java .\modules\TrakEM2\ini\trakem2\imaging\filters\LUTOrange.java .\modules\TrakEM2\ini\trakem2\display\Connector.java .\modules\TrakEM2\ini\trakem2\utils\History.java .\modules\TrakEM2\ini\trakem2\utils\Bureaucrat.java .\modules\TrakEM2\mpicbg\trakem2\transform\TransformMeshMapping.java .\modules\TrakEM2\ini\trakem2\utils\Operation.java
The system is out of resources.
Consult the following stack trace for details.
java.lang.OutOfMemoryError: Java heap space
at com.sun.tools.javac.util.Position$LineMapImpl.build(Position.java:153)
at com.sun.tools.javac.util.Position.makeLineMap(Position.java:77)
at com.sun.tools.javac.parser.Scanner.getLineMap(Scanner.java:1120)
at com.sun.tools.javac.main.JavaCompiler.parse(JavaCompiler.java:584)
at com.sun.tools.javac.main.JavaCompiler.parse(JavaCompiler.java:622)
at com.sun.tools.javac.main.JavaCompiler.parseFiles(JavaCompiler.java:878)
at com.sun.tools.javac.main.JavaCompiler.compile(JavaCompiler.java:796)
at com.sun.tools.javac.main.Main.compile(Main.java:388)
at com.sun.tools.javac.main.Main.compile(Main.java:308)
at com.sun.tools.javac.main.Main.compile(Main.java:299)
at com.sun.tools.javac.Main.compile(Main.java:100)
at sun.reflect.GeneratedMethodAccessor1.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at fiji.build.Fake.callJavac(Fake.java:551)
at fiji.build.Fake.compileJavas(Fake.java:637)
at fiji.build.Rule.compileJavas(Rule.java:409)
at fiji.build.CompileJar.action(CompileJar.java:56)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.fakeOrMake(Fake.java:1129)
at fiji.build.SubFake.fakeOrMake(SubFake.java:203)
at fiji.build.SubFake.action(SubFake.java:164)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:265)
at fiji.build.Fake.main(Fake.java:55)
Compile error
at fiji.build.Fake.callJavac(Fake.java:554)
at fiji.build.Fake.compileJavas(Fake.java:637)
at fiji.build.Rule.compileJavas(Rule.java:409)
at fiji.build.CompileJar.action(CompileJar.java:56)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.fakeOrMake(Fake.java:1129)
at fiji.build.SubFake.fakeOrMake(SubFake.java:203)
at fiji.build.SubFake.action(SubFake.java:164)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:265)
at fiji.build.Fake.main(Fake.java:55)
Fake failed: Compile error
in rule (fiji.build.CompileJar) TrakEM2_.jar <- ini/trakem2/imagi...
in rule (fiji.build.SubFake) plugins/TrakEM2_.jar <- jars/ij.jar ...
in rule (fiji.build.All) all <- ImageJ fiji jars/ij.jar plugins/l...
Build step 'Execute shell' marked build as failure
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