[ImageJ-builds] Build failed in Jenkins: fiji-core #387
Jenkins Daemon
jenkins at qa.nest-initiative.org
Tue Jul 3 22:51:40 CDT 2012
See <https://qa.nest-initiative.org/job/fiji-core/387/>
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[...truncated 2398 lines...]
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<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:565: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
final Future<ArrayList<PointMatch>>[] fpm = new Future[sorted_file_names.length-1];
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:578: cannot find symbol
symbol : class NotEnoughDataPointsException
location: class register_virtual_stack.Register_Virtual_Stack_MT
catch ( NotEnoughDataPointsException e )
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:614: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
CoordinateTransform initialModel = (Param.registrationModelIndex == Register_Virtual_Stack_MT.TRANSLATION ) ?
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:615: cannot find symbol
symbol : class TranslationModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
new TranslationModel2D()
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:616: cannot find symbol
symbol : class RigidModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
: new RigidModel2D();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:620: cannot find symbol
symbol : class TranslationModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
((TranslationModel2D) initialModel).fit(inliers[i-1]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:622: cannot find symbol
symbol : class RigidModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
((RigidModel2D) initialModel).fit(inliers[i-1]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:630: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
PointMatch.apply(inliers[inliers.length-1] , transform[transform.length-1]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:695: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
List<PointMatch> new_list = (List<PointMatch>) PointMatch.flip(list);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:695: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
List<PointMatch> new_list = (List<PointMatch>) PointMatch.flip(list);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:695: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
List<PointMatch> new_list = (List<PointMatch>) PointMatch.flip(list);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:696: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
PointMatch.apply(new_list, t);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:698: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
new_list = (List<PointMatch>) PointMatch.flip(new_list);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:698: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
new_list = (List<PointMatch>) PointMatch.flip(new_list);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:724: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
mean_distance[0] += PointMatch.meanDistance(inliers[iSlice]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:724: operator + cannot be applied to float,<any>
mean_distance[0] += PointMatch.meanDistance(inliers[iSlice]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:724: inconvertible types
found : <nulltype>
required: float
mean_distance[0] += PointMatch.meanDistance(inliers[iSlice]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:755: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
CoordinateTransform t = getCoordinateTransform(p);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:756: cannot find symbol
symbol : class CubicBSplineTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
if(t instanceof CubicBSplineTransform)
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:758: cannot find symbol
symbol : class CubicBSplineTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
( (CubicBSplineTransform) t ).set(p.elastic_param, (int)centerX[j]*2, (int)centerY[j]*2,
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:767: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
ArrayList<PointMatch> firstMatches = new ArrayList <PointMatch>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:767: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
ArrayList<PointMatch> firstMatches = new ArrayList <PointMatch>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:768: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
PointMatch.flip(inliers[0], firstMatches);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:791: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
List<PointMatch> combined_inliers = new ArrayList<PointMatch>(inliers[iSlice-1]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:791: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
List<PointMatch> combined_inliers = new ArrayList<PointMatch>(inliers[iSlice-1]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:796: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
ArrayList<PointMatch> flippedMatches = new ArrayList <PointMatch>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:796: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
ArrayList<PointMatch> flippedMatches = new ArrayList <PointMatch>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:797: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
PointMatch.flip(inliers[iSlice], flippedMatches);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:798: cannot find symbol
symbol : class PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
for(final PointMatch match : flippedMatches )
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:810: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
PointMatch.apply(inliers[iSlice-1], t);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:829: cannot find symbol
symbol : variable PointMatch
location: class register_virtual_stack.Register_Virtual_Stack_MT
mean_distance[n+1] += PointMatch.meanDistance(inliers[k]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:829: operator + cannot be applied to float,<any>
mean_distance[n+1] += PointMatch.meanDistance(inliers[k]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:829: inconvertible types
found : <nulltype>
required: float
mean_distance[n+1] += PointMatch.meanDistance(inliers[k]);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1157: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
CoordinateTransform[] transform = new CoordinateTransform[sorted_file_names.length];
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1157: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
CoordinateTransform[] transform = new CoordinateTransform[sorted_file_names.length];
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1171: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
final CoordinateTransform t = getCoordinateTransform(p);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1185: cannot find symbol
symbol : class AffineModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
transform[referenceIndex] = new AffineModel2D();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1204: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
final CoordinateTransform t = getCoordinateTransform(p);
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1221: cannot find symbol
symbol : class CoordinateTransformList
location: class register_virtual_stack.Register_Virtual_Stack_MT
final CoordinateTransformList<CoordinateTransform> ctl = new CoordinateTransformList<CoordinateTransform>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1221: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
final CoordinateTransformList<CoordinateTransform> ctl = new CoordinateTransformList<CoordinateTransform>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1221: cannot find symbol
symbol : class CoordinateTransformList
location: class register_virtual_stack.Register_Virtual_Stack_MT
final CoordinateTransformList<CoordinateTransform> ctl = new CoordinateTransformList<CoordinateTransform>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1221: cannot find symbol
symbol : class CoordinateTransform
location: class register_virtual_stack.Register_Virtual_Stack_MT
final CoordinateTransformList<CoordinateTransform> ctl = new CoordinateTransformList<CoordinateTransform>();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1225: cannot find symbol
symbol : class TranslationModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
final TranslationModel2D tr = new TranslationModel2D();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java>:1225: cannot find symbol
symbol : class TranslationModel2D
location: class register_virtual_stack.Register_Virtual_Stack_MT
final TranslationModel2D tr = new TranslationModel2D();
^
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/register_virtual_stack_slices/src/main/java/register_virtual_stack/Register_Virtual_Stack_MT.java> uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
100 errors
Compile error
at fiji.build.Fake.callJavac(Fake.java:554)
at fiji.build.MiniMaven$POM.build(MiniMaven.java:477)
at fiji.build.MiniMaven$POM.buildJar(MiniMaven.java:408)
at fiji.build.SubFake.action(SubFake.java:163)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:265)
at fiji.build.Fake.main(Fake.java:55)
Compile error
at fiji.build.Fake.callJavac(Fake.java:554)
at fiji.build.MiniMaven$POM.build(MiniMaven.java:477)
at fiji.build.MiniMaven$POM.buildJar(MiniMaven.java:408)
at fiji.build.SubFake.action(SubFake.java:163)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:331)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:265)
at fiji.build.Fake.main(Fake.java:55)
Compile error
in rule (fiji.build.SubFake) plugins/register_virtual_stack_slice...
in rule (fiji.build.All) all <- ImageJ fiji jars/ij.jar plugins/l...
Build step 'Execute shell' marked build as failure
Archiving artifacts
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