[ImageJ-builds] Build failed in Jenkins: fiji-windows-full #145

Mon Aug 27 13:52:40 CDT 2012

See <https://qa.nest-initiative.org/job/fiji-windows-full/145/changes>

Changes:

[johannes.schindelin] Build.sh: update the dependencies of fake before building it

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[...truncated 71 lines...]
HEAD is now at 39ce99d Merge branch 'master' of ssh://fiji.sc/srv/git/imglib
Entering 'modules/javassist'
HEAD is now at 4ed3ffd Rebasing merge of 'origin/fiji' into fiji
Entering 'modules/jsch'
HEAD is now at 8a1642e Imported from ~/Downloads/jsch-0.1.44.zip.
Entering 'modules/junit'
HEAD is now at b362c66 Preparing for 4.6
Entering 'modules/jython'
HEAD is now at a440b76 website preparation for 2.5.2 final
Entering 'modules/mpicbg'
HEAD is now at 4200032 simplify and hopefully speedup integral image constructors---not benchmarked yet
Entering 'modules/tcljava'
HEAD is now at 20ab053 add 1.4.1 release note about Tcl Blend binary package
Entering 'modules/weka'
HEAD is now at 4f6b274 Added a toString() method to the OLMRules inner class to print out the instances in the rule set.
+ git submodule init
Submodule 'java/linux' () registered for path 'java/linux'
Submodule 'java/linux-amd64' () registered for path 'java/linux-amd64'
Submodule 'java/macosx-java3d' () registered for path 'java/macosx-java3d'
Submodule 'java/win32' () registered for path 'java/win32'
Submodule 'java/win64' () registered for path 'java/win64'
Submodule 'AutoComplete' () registered for path 'modules/AutoComplete'
Submodule 'ImageJA' () registered for path 'modules/ImageJA'
Submodule 'RSyntaxTextArea' () registered for path 'modules/RSyntaxTextArea'
Submodule 'Retrotranslator' () registered for path 'modules/Retrotranslator'
Submodule 'TrakEM2' () registered for path 'modules/TrakEM2'
Submodule 'batik' () registered for path 'modules/batik'
Submodule 'bio-formats' () registered for path 'modules/bio-formats'
Submodule 'clojure' () registered for path 'modules/clojure'
Submodule 'commons-math' () registered for path 'modules/commons-math'
Submodule 'ij-plugins' () registered for path 'modules/ij-plugins'
Submodule 'modules/imagej5d' () registered for path 'modules/image5d'
Submodule 'modules/imagej2' () registered for path 'modules/imagej2'
Submodule 'imglib' () registered for path 'modules/imglib'
Submodule 'modules/javassist' () registered for path 'modules/javassist'
Submodule 'jsch' () registered for path 'modules/jsch'
Submodule 'junit' () registered for path 'modules/junit'
Submodule 'jython' () registered for path 'modules/jython'
Submodule 'mpicbg' () registered for path 'modules/mpicbg'
Submodule 'tcljava' () registered for path 'modules/tcljava'
Submodule 'weka' () registered for path 'modules/weka'
+ git submodule sync
Synchronizing submodule url for 'java/linux'
Synchronizing submodule url for 'java/linux-amd64'
Synchronizing submodule url for 'java/macosx-java3d'
Synchronizing submodule url for 'java/win32'
Synchronizing submodule url for 'java/win64'
Synchronizing submodule url for 'AutoComplete'
Synchronizing submodule url for 'ImageJA'
Synchronizing submodule url for 'RSyntaxTextArea'
Synchronizing submodule url for 'Retrotranslator'
Synchronizing submodule url for 'TrakEM2'
Synchronizing submodule url for 'batik'
Synchronizing submodule url for 'bio-formats'
Synchronizing submodule url for 'clojure'
Synchronizing submodule url for 'commons-math'
Synchronizing submodule url for 'ij-plugins'
Synchronizing submodule url for 'modules/imagej5d'
Synchronizing submodule url for 'modules/imagej2'
Synchronizing submodule url for 'imglib'
Synchronizing submodule url for 'modules/javassist'
Synchronizing submodule url for 'jsch'
Synchronizing submodule url for 'junit'
Synchronizing submodule url for 'jython'
Synchronizing submodule url for 'mpicbg'
Synchronizing submodule url for 'tcljava'
Synchronizing submodule url for 'weka'
++ git ls-files --stage
++ sed -n 's/^160000 .\{40\} 0.//p'
++ grep -v java/
+ SUBMODULES='modules/AutoComplete
modules/ImageJA
modules/RSyntaxTextArea
modules/Retrotranslator
modules/TrakEM2
modules/batik
modules/bio-formats
modules/clojure
modules/commons-math
modules/ij-plugins
modules/image5d
modules/imagej2
modules/imglib
modules/javassist
modules/jsch
modules/junit
modules/jython
modules/mpicbg
modules/tcljava
modules/weka'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/AutoComplete
Submodule 'AutoComplete' () registered for path 'modules/AutoComplete'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/ImageJA
Submodule 'ImageJA' () registered for path 'modules/ImageJA'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/RSyntaxTextArea
Submodule 'RSyntaxTextArea' () registered for path 'modules/RSyntaxTextArea'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/Retrotranslator
Submodule 'Retrotranslator' () registered for path 'modules/Retrotranslator'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/TrakEM2
Submodule 'TrakEM2' () registered for path 'modules/TrakEM2'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/batik
Submodule 'batik' () registered for path 'modules/batik'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/bio-formats
Submodule 'bio-formats' () registered for path 'modules/bio-formats'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/clojure
Submodule 'clojure' () registered for path 'modules/clojure'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/commons-math
Submodule 'commons-math' () registered for path 'modules/commons-math'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/ij-plugins
Submodule 'ij-plugins' () registered for path 'modules/ij-plugins'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/image5d
Submodule 'modules/imagej5d' () registered for path 'modules/image5d'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/imagej2
Submodule 'modules/imagej2' () registered for path 'modules/imagej2'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/imglib
Submodule 'imglib' () registered for path 'modules/imglib'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/javassist
Submodule 'modules/javassist' () registered for path 'modules/javassist'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/jsch
Submodule 'jsch' () registered for path 'modules/jsch'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/junit
Submodule 'junit' () registered for path 'modules/junit'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/jython
Submodule 'jython' () registered for path 'modules/jython'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/mpicbg
Submodule 'mpicbg' () registered for path 'modules/mpicbg'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/tcljava
Submodule 'tcljava' () registered for path 'modules/tcljava'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/weka
Submodule 'weka' () registered for path 'modules/weka'
+ git submodule foreach 'git clean -dfx'
Entering 'java/win64'
Entering 'modules/AutoComplete'
Entering 'modules/ImageJA'
Entering 'modules/RSyntaxTextArea'
Entering 'modules/Retrotranslator'
Entering 'modules/TrakEM2'
Entering 'modules/batik'
Entering 'modules/bio-formats'
Entering 'modules/clojure'
Entering 'modules/commons-math'
Entering 'modules/ij-plugins'
Entering 'modules/image5d'
Entering 'modules/imagej2'
Entering 'modules/imglib'
Entering 'modules/javassist'
Entering 'modules/jsch'
Entering 'modules/junit'
Entering 'modules/jython'
Entering 'modules/mpicbg'
Entering 'modules/tcljava'
Entering 'modules/weka'
[fiji-windows-full] $ sh -xe C:\Users\jenkins\AppData\Local\Temp\hudson2518774773820001260.sh
+ export PATH=/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ PATH=/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ sh -x ./Build.sh -Dminimaven.updateinterval=1 -- verbose=true
+ set -a
++ dirname ./Build.sh
+ CWD=.
++ sed -n 's/^.<version>\(.*\)<\/version>.*/\1/p'
+ VERSION=2.0.0-SNAPSHOT
+ FAKE_JAR=jars/fake-2.0.0-SNAPSHOT.jar
+ PATHSEP=:
++ uname -s
+ UNAME_S=MINGW32_NT-6.1
+ case "$UNAME_S" in
++ cd .
++ pwd
+ CWD=/c/jenkins/workspace/fiji-windows-full
+ PATHSEP=';'
+ case "$PROCESSOR_ARCHITEW6432" in
+ platform=win64
+ java_submodule=win64
+ exe=.exe
+ test -n win64
+ test -z ''
++ get_java_home
++ test -d ''
++ test -n win64
++ test -d /c/jenkins/workspace/fiji-windows-full/java/win64
+++ ls -t /c/jenkins/workspace/fiji-windows-full/java/win64
+++ head -n 1
++ echo /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ JAVA_HOME=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -z win64
+ test -f /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/lib/tools.jar
+ test -f /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/../lib/tools.jar
+ case "$JAVA_HOME" in
+ test -n /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/jre
+ export PATH=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ PATH=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ : build fake.jar, making sure javac is in the PATH
++ get_java_home
++ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
++ echo /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
++ get_java_home
++ test -d /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
++ echo /c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre
+ PATH=/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin:/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/bin:/c/jenkins/workspace/fiji-windows-full/java/win64/jdk1.6.0_24/jre/../bin
+ ensure_fake_is_built
++ need_to_build_fake
++ cd /c/jenkins/workspace/fiji-windows-full
++ test -f jars/fake-2.0.0-SNAPSHOT.jar
++ echo YesPlease
++ return
++ return
+ test -z YesPlease
+ cd /c/jenkins/workspace/fiji-windows-full
+ : blow previous builds away
+ rm -f jars/fake.jar
+ rm -rf src-plugins/fake/target/classes
+ mkdir -p src-plugins/fake/target/classes
+ : compile classes
++ find src-plugins/fake/ -name '*.java'
+ java -jar precompiled/javac.jar -source 1.5 -target 1.5 -classpath precompiled/javac.jar -d src-plugins/fake/target/classes src-plugins/fake/src/main/java/fiji/build/All.java src-plugins/fake/src/main/java/fiji/build/ByteCodeAnalyzer.java src-plugins/fake/src/main/java/fiji/build/CompileClass.java src-plugins/fake/src/main/java/fiji/build/CompileCProgram.java src-plugins/fake/src/main/java/fiji/build/CompileJar.java src-plugins/fake/src/main/java/fiji/build/CompileNativeLibrary.java src-plugins/fake/src/main/java/fiji/build/CopyJar.java src-plugins/fake/src/main/java/fiji/build/ExecuteProgram.java src-plugins/fake/src/main/java/fiji/build/Fake.java src-plugins/fake/src/main/java/fiji/build/FakeException.java src-plugins/fake/src/main/java/fiji/build/GlobFilter.java src-plugins/fake/src/main/java/fiji/build/minimaven/BuildEnvironment.java src-plugins/fake/src/main/java/fiji/build/minimaven/Coordinate.java src-plugins/fake/src/main/java/fiji/build/minimaven/JarClassLoader.java src-plugins/fake/src/main/java/fiji/build/minimaven/JavaCompiler.java src-plugins/fake/src/main/java/fiji/build/minimaven/POM.java src-plugins/fake/src/main/java/fiji/build/minimaven/ReadInto.java src-plugins/fake/src/main/java/fiji/build/minimaven/SnapshotPOMHandler.java src-plugins/fake/src/main/java/fiji/build/minimaven/VersionPOMHandler.java src-plugins/fake/src/main/java/fiji/build/MiniMaven.java src-plugins/fake/src/main/java/fiji/build/MultiIterable.java src-plugins/fake/src/main/java/fiji/build/ObsoleteClassFiles.java src-plugins/fake/src/main/java/fiji/build/ParallelMaker.java src-plugins/fake/src/main/java/fiji/build/Parser.java src-plugins/fake/src/main/java/fiji/build/Rule.java src-plugins/fake/src/main/java/fiji/build/Special.java src-plugins/fake/src/main/java/fiji/build/StreamDumper.java src-plugins/fake/src/main/java/fiji/build/SubFake.java src-plugins/fake/src/main/java/fiji/build/Util.java
+ : compile .jar using MiniMaven
+ cd src-plugins
+ java -Dij.dir=/c/jenkins/workspace/fiji-windows-full/.. -classpath 'fake/target/classes;../precompiled/javac.jar' -DartifactId=fake fiji.build.MiniMaven get-dependencies
Exception in thread "main" java.lang.RuntimeException: Parent not found: org.scijava/pom-scijava-1.19 (please call MiniMaven's 'download'
	at fiji.build.minimaven.BuildEnvironment.parse(BuildEnvironment.java:175)
	at fiji.build.minimaven.BuildEnvironment.parse(BuildEnvironment.java:100)
	at fiji.build.MiniMaven.main(MiniMaven.java:47)
+ echo 'Could not build Fiji Build'
Could not build Fiji Build
+ exit 1
Build step 'Execute shell' marked build as failure