[ImageJ-bugs] [Bug 1029] New: All my plugins stopped working after updating ImageJ/Fiji

bugzilla at fiji.sc bugzilla at fiji.sc
Thu Mar 19 05:56:17 CDT 2015 

http://fiji.sc/bugzilla/show_bug.cgi?id=1029

            Bug ID: 1029
           Summary: All my plugins stopped working after updating
                    ImageJ/Fiji
           Product: Fiji
           Version: unspecified
          Hardware: PC
                OS: Windows
            Status: NEW
          Severity: normal
          Priority: P4
         Component: Plugins
          Assignee: imagej-bugs at imagej.net
          Reporter: petter.ranefall at it.uu.se
                CC: petter.ranefall at it.uu.se

[ERROR] Exception
java.lang.IndexOutOfBoundsException: start 0, end 1024, s.length() 0
        at
java.lang.AbstractStringBuilder.append(AbstractStringBuilder.java:453)
~[na:1.6.0_24]
        at java.lang.StringBuilder.append(StringBuilder.java:179)
~[na:1.6.0_24]
        at
org.scijava.plugins.scripting.java.JavaEngine.getReaderContentsAsString(JavaEngine.java:904)
~[scripting-java-0.3.0.jar:0.3.0]
        at
org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:169)
~[scripting-java-0.3.0.jar:0.3.0]
        at org.scijava.script.ScriptModule.run(ScriptModule.java:174)
~[scijava-common-2.39.0.jar:2.39.0]
        at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167)
[scijava-common-2.39.0.jar:2.39.0]
        at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126)
[scijava-common-2.39.0.jar:2.39.0]
        at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65)
[scijava-common-2.39.0.jar:2.39.0]
        at
org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:164)
[scijava-common-2.39.0.jar:2.39.0]
        at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
[na:1.6.0_24]
        at java.util.concurrent.FutureTask.run(FutureTask.java:138)
[na:1.6.0_24]
        at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
[na:1.6.0_24]
        at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
[na:1.6.0_24]
        at java.lang.Thread.run(Thread.java:662) [na:1.6.0_24]

Information about your version of Java:

  os.arch => amd64
  os.name => Windows 7
  os.version => 6.1
  java.version => 1.6.0_24
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_24-b07
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 19.1-b02
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: C:\Fiji\Fiji.app/java/win64/jdk1.6.0_24//jre
  imagej.dir => C:\Fiji\Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150318211526)
Fiji: http://fiji.sc/update/ (last check:20150318211552)
Bio-Formats: http://sites.imagej.net/Bio-Formats/ (last check:20150319022651)
IJPB-plugins: http://sites.imagej.net/IJPB-plugins/ (last check:20150219113515)
Morphology: http://sites.imagej.net/Landini/ (last check:20140723165558)
OMERO 5.0: http://sites.imagej.net/OMERO-5.0/ (last check:20150210205446)

Files not up-to-date:
  a058df87 (LOCAL_ONLY) 20140124131224 jars/LSM_Reader.jar
  1ad3be0d (LOCAL_ONLY) 20130814112951 jars/jpedalSTD.jar
  05e8e414 (LOCAL_ONLY) 20100628140418 plugins/Colour_Deconvolution.class
  7e2df05a (LOCAL_ONLY) 20141017143922
plugins/Filters/Sobel_Convolution$FloatArray.class
  e7160f15 (LOCAL_ONLY) 20141017143922
plugins/Filters/Sobel_Convolution$FloatArray2D.class
  350f56e6 (LOCAL_ONLY) 20141017143922
plugins/Filters/Sobel_Convolution$FloatArray3D.class
  2d3455b1 (LOCAL_ONLY) 20141017143922 plugins/Filters/Sobel_Convolution.class
  e1ad1f55 (MODIFIED) 20130924134037 plugins/Gray_Morphology-2.3.2-SNAPSHOT.jar
  167adb59 (LOCAL_ONLY) 20090303131540 plugins/Histograms/CogXProfile_.class
  7aaeccc8 (LOCAL_ONLY) 20150108111533
plugins/Histograms/CompSize2DStdBrightBkg_.class
  e0d1c9ef (LOCAL_ONLY) 20150113091449
plugins/Histograms/CompSize2DStdDarkBkg_.class
  d7872e99 (LOCAL_ONLY) 20140625143057
plugins/Histograms/Components3DBothCompTree_.class
  0b1773dd (LOCAL_ONLY) 20141017132355
plugins/Histograms/Components3DInvCompTree_.class
  2f692639 (LOCAL_ONLY) 20150209112547 plugins/Histograms/FrequencyNoBkg_.class
  65e9c0c9 (LOCAL_ONLY) 20070704145400 plugins/Histograms/Frequency_.class
  a6b93598 (LOCAL_ONLY) 20141216093245 plugins/Histograms/Globals.class
  67579dde (LOCAL_ONLY) 20141217155525
plugins/Histograms/HIDE/CompSize2DInvCompTreeFast2_.class
  a280f3e9 (LOCAL_ONLY) 20141218164505
plugins/Histograms/HIDE/CompSize2DInvCompTreeFastStd_.class
  db315ccf (LOCAL_ONLY) 20141217155538
plugins/Histograms/HIDE/CompSize2DInvCompTreeFast_.class
  121c7e96 (LOCAL_ONLY) 20141218152559
plugins/Histograms/HIDE/CompSize2DInvCompTreeStd_.class
  b1e183f8 (LOCAL_ONLY) 20141216093849
plugins/Histograms/HIDE/CompSize3DInvCompTreeStd_.class
  5bc9c0b4 (LOCAL_ONLY) 20141208084503
plugins/Histograms/HIDE/CompSize3DInvCompTree_.class
  7e0f606c (LOCAL_ONLY) 20141021091158
plugins/Histograms/HIDE/SnellBrightObjects_.class
  e6fbb777 (LOCAL_ONLY) 20071030143740 plugins/Histograms/MinMaxVal_.class
  b05a271b (LOCAL_ONLY) 20141215093511 plugins/Histograms/P2Ahist_.class
  7cd68c0b (LOCAL_ONLY) 20071029095922
plugins/Histograms/YMaxLineProfile_.class
  c49ff61a (LOCAL_ONLY) 20150209091936 plugins/Histograms/YProfile3_.class
  60660b66 (LOCAL_ONLY) 20150128101045 plugins/Histograms/YProfile_.class
  2032655d (MODIFIED) 20150108103201 plugins/MTrackJ_.jar
  ef7afe1f (LOCAL_ONLY) 20130910161820 plugins/MetaImage_Reader_Writer.jar
  7f8dc054 (LOCAL_ONLY) 20071022143314 plugins/Morphology/ConnectOuter_.class
  aafd8962 (LOCAL_ONLY) 20071030103218 plugins/Morphology/ErodeTopAuto_.class
  91810432 (LOCAL_ONLY) 20071025135326 plugins/Morphology/ErodeTop_.class
  20da62a4 (LOCAL_ONLY) 20071024122342
plugins/Morphology/_2DCOGInside4Dir_.class
  9c96b915 (LOCAL_ONLY) 20070704145400
plugins/Morphology/_2DLabelSizeThr_.class
  fc1b4190 (LOCAL_ONLY) 20070704145400
plugins/Morphology/_2DLargestObject_.class
  bd272d68 (LOCAL_ONLY) 20071030163426 plugins/Morphology/_3DLabelMaxVal_.class
  b433bffb 20150213154911 plugins/Morphology/_3DLabelObjectsCompFeat_.class
  3bffe76c (LOCAL_ONLY) 20150319113103
plugins/Morphology/_3DLabelObjectsCompFeat_.jar
  94121888 (LOCAL_ONLY) 20150203082852
plugins/Morphology/_3DLabelObjects_.class
  2f5e2fa4 (LOCAL_ONLY) 20070704145400
plugins/Morphology/_3DLargestObjectPercentage_.class
  a7dfe934 (LOCAL_ONLY) 20070704145400
plugins/Morphology/_3DLargestObject_.class
  051cf47d (LOCAL_ONLY) 20070704155400 plugins/Morphology/combine_slices.class
  2f8d1fd0 (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJCredits.class
  cacee973 (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJEdge.class
  ee01617c (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJHierarchy.class
  e51f6692 (LOCAL_ONLY) 20140507083425 plugins/MosaicJ/MosaicJPlayField.class
  2d605607 (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJStatus$1.class
  f694c43d (LOCAL_ONLY) 20140507083426
plugins/MosaicJ/MosaicJStatus$DisplayPanel.class
  a24b8ed8 (LOCAL_ONLY) 20140507083426
plugins/MosaicJ/MosaicJStatus$ExportPanel.class
  bb883c12 (LOCAL_ONLY) 20140507083426
plugins/MosaicJ/MosaicJStatus$ImportPanel.class
  31e70be0 (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJStatus.class
  7ef6a6be (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJThumb.class
  911c8fb6 (LOCAL_ONLY) 20140507083426 plugins/MosaicJ/MosaicJTree.class
  8394440d (LOCAL_ONLY) 20140507083425 plugins/MosaicJ/MosaicJ_.class
  29f4f2c9 (LOCAL_ONLY) 20130924152416 plugins/MyExamples/TopHat2_.ijm
  19d7d0ad (LOCAL_ONLY) 20130924150616 plugins/MyExamples/TopHat2_.txt
  74045838 (LOCAL_ONLY) 20130924160022 plugins/MyExamples/TopHat3_.ijm
  7474dcca (LOCAL_ONLY) 20130924153039 plugins/MyExamples/TopHat_.ijm
  44f3f6f3 (LOCAL_ONLY) 20130902084628 plugins/NDPITools_.jar
  4fe1cfd7 (LOCAL_ONLY) 20131014124523 plugins/SNR_.jar
  c475d919 (LOCAL_ONLY) 20150316112104
plugins/Segmentation/AdaptiveSegmentationEllipseFit_.jar
  5002903f (LOCAL_ONLY) 20150316105550
plugins/Segmentation/AdaptiveSizeBasedSegmentationEllipseFitTestNonOpt_.jar
  532a4b0c (LOCAL_ONLY) 20150227132443
plugins/Segmentation/AdaptiveSizeBasedSegmentationEllipseFit_.class
  373ec52f (LOCAL_ONLY) 20150219131115
plugins/Segmentation/AdaptiveSizeBasedSegmentation_.class
  8f8f80ad (LOCAL_ONLY) 20070704145400
plugins/Segmentation/Entropy_Threshold.class
  d4156883 (LOCAL_ONLY) 20130926135141
plugins/Segmentation/FixedThreshold_.class
  07bfe8b6 (LOCAL_ONLY) 20090508081544
plugins/Segmentation/FuzzyConnectedness_.class
  28eef806 (LOCAL_ONLY) 20150225091814
plugins/Segmentation/HIDE/AdaptiveSizeBasedSegmentationEllipseFitNoBelow_.class
  1656ead0 (LOCAL_ONLY) 20150225113157
plugins/Segmentation/HIDE/AdaptiveSizeBasedSegmentationEllipseFitTest_.class
  5200bc1d (LOCAL_ONLY) 20141209135146
plugins/Segmentation/HIDE/BlobDetection_.ijm
  b94d01d5 (LOCAL_ONLY) 20150114100437
plugins/Segmentation/HIDE/BlobSegmentationDarkBkgMaxNWithinSizeIntervalPlot_.class
  bd4dbfcb (LOCAL_ONLY) 20150113110749
plugins/Segmentation/HIDE/BlobSegmentationDarkBkgMaxNWithinSizeInterval_.class
  9e0412fd (LOCAL_ONLY) 20150107105424
plugins/Segmentation/HIDE/BlobSegmentationDarkBkgPeak_.class
  eec61d97 (LOCAL_ONLY) 20150108135207
plugins/Segmentation/HIDE/BlobSegmentationDarkBkgSizeInterval_.class
  40e2e244 (LOCAL_ONLY) 20141209113412
plugins/Segmentation/HIDE/BlobSegmentation_.class
  8abb0b4c (LOCAL_ONLY) 20150219092019
plugins/Segmentation/HIDE/DynamicSizeBasedSegmentationEllipseFitDebug_.class
  37205e3d (LOCAL_ONLY) 20150210155540
plugins/Segmentation/HIDE/DynamicSizeBasedThrDebug_.class
  b25d9fd6 (LOCAL_ONLY) 20150219092012
plugins/Segmentation/HIDE/DynamicSizeBasedThr_.class
  5a90454e (LOCAL_ONLY) 20150114141944
plugins/Segmentation/HIDE/SizeBasedThrBoth_.class
  6f51d49a (LOCAL_ONLY) 20150204104153
plugins/Segmentation/HIDE/SizeBasedThrTestF_.class
  1489b9e6 (LOCAL_ONLY) 20130827095403
plugins/Segmentation/HorizontalLines_.class
  f7f6efd8 (LOCAL_ONLY) 20140204161522 plugins/Segmentation/Hough_Circles.class
  02a8fb0d (LOCAL_ONLY) 20130808090216 plugins/Segmentation/KMeans_.class
  9b494778 (LOCAL_ONLY) 20150303100526 plugins/Segmentation/Point2d.class
  b880f83a (LOCAL_ONLY) 20150305102042
plugins/Segmentation/SizeBasedThrStability_.ijm
  0846aeee (LOCAL_ONLY) 20150316114523 plugins/Segmentation/SizeBasedThr_.jar
  20561d6e (LOCAL_ONLY) 20150303100519 plugins/Segmentation/Snake.class
  ff8d3ba8 (LOCAL_ONLY) 20150303100509 plugins/Segmentation/Snake_.class
  de24ca54 (LOCAL_ONLY) 20150305143129 plugins/Segmentation/TimingThr_.ijm
  9a280aec (LOCAL_ONLY) 20130827100704 plugins/Segmentation/absnake_.jar
  8c0467d1 (LOCAL_ONLY) 20130918140925
plugins/Segmentation/adaptiveThreshold_win64.jar
  d1b9c61a (LOCAL_ONLY) 20131016141422
plugins/SignalToNoise/SNRAroundMaxima_.ijm
  3d33da65 (LOCAL_ONLY) 20131014090220 plugins/SignalToNoise/SignalToNoise_.ijm
  c17ca41c (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/Acoeffs.class
  becd5295 (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/Bcoeffs.class
  f0e573b3 (LOCAL_ONLY) 20130827101336
plugins/SplineSnake/BsplineTransform.class
  f5200038 (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/Convolver.class
  fa7a53dc (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/CreateMovie.class
  387b2587 (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/Curve.class
  fd0f6aa0 (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/DirDerrivative.class
  44343434 (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/DisplayCurve.class
  9e3f40f1 (LOCAL_ONLY) 20130827101336
plugins/SplineSnake/Evaluatefunction.class
  d4b09bcc (LOCAL_ONLY) 20130827101337 plugins/SplineSnake/Image.class
  618e23d0 (LOCAL_ONLY) 20130827101337 plugins/SplineSnake/ImageDisplay.class
  c8aeb43c (LOCAL_ONLY) 20130827101337 plugins/SplineSnake/Iterutil.class
  a8ec6d26 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/Preferences/prefs.txt
  376bc4dd (LOCAL_ONLY) 20130827101337 plugins/SplineSnake/Smooth.class
  56754b77 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/SplineFlowFileReader.class
  8a3c57e8 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/SplineSnakePreferences$1.class
  f7bc6f4a (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/SplineSnakePreferences$10.class
  55b3289a (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/SplineSnakePreferences$2.class
  cd29cfaf (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/SplineSnakePreferences$3.class
  b24eefcf (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/SplineSnakePreferences$4.class
  0ea6b2e0 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/SplineSnakePreferences$5.class
  aed91159 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/SplineSnakePreferences$6.class
  7426cf03 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/SplineSnakePreferences$7.class
  4cec0f05 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/SplineSnakePreferences$8.class
  d05808ab (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/SplineSnakePreferences$9.class
  af80c70c (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/SplineSnakePreferences.class
  af466097 (LOCAL_ONLY) 20130827101336 plugins/SplineSnake/dirDerDisplay.class
  da951990 (LOCAL_ONLY) 20130827101336
plugins/SplineSnake/evolveCurveDisplay.class
  bbf9d8cb (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/imageaccess/ImageAccess.class
  f06fafa2 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/imageaccess/ImageAccessStack.class
  8c30be0b (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/imageaccess/ImageAccessTools.class
  31c27e17 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/progressBarVolume.class
  e37db890 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/selectCurrentCurve.class
  5491697d (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/splineClearAllConstraints.class
  35789e91 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/splineFlowChangeFocus.class
  e3beed5d (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/splineFlowClearAll.class
  db954c04 (LOCAL_ONLY) 20130827101337 plugins/SplineSnake/splineFlowFile.class
  af7e6977 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/splineFlowTerminate.class
  e699fa4d (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/splineSnakeAction.class
  3f652947 (LOCAL_ONLY) 20130827101337
plugins/SplineSnake/splineSnakeHandler.class
  8275ddd0 (LOCAL_ONLY) 20130827101338
plugins/SplineSnake/splineSnakeToolbar.class
  b7d737aa (LOCAL_ONLY) 20130827101337 plugins/SplineSnake/splineSnake_.class
  80e4afab (LOCAL_ONLY) 20141104151215 plugins/Stacks/JoinSlicesMin_.class
  2295d5ec (LOCAL_ONLY) 20140613102352 plugins/Stacks/MaxAndMinProjections_.ijm
  d46f8225 (LOCAL_ONLY) 20130808095748
plugins/Stacks/MaxMinSlicesGeneral_.class
  75c079a6 (LOCAL_ONLY) 20130816110635 plugins/Stacks/MaxMinSlicesSub2_.class
  1111ca31 (LOCAL_ONLY) 20141110103101 plugins/Stacks/MaxMinSlices_.class
  59545591 (LOCAL_ONLY) 20130807104912 plugins/Stacks/MeanSlices_.class
  b88c6574 (LOCAL_ONLY) 20140204163303 plugins/Stacks/MinSlices_.class
  3c4d7b00 (LOCAL_ONLY) 20130819134130
plugins/Stacks/SumOfNegativeSlopes_.class
  a5313d14 (LOCAL_ONLY) 20130924163926
plugins/TopHatFilterExample/TopHatFilter2_.ijm
  00e59d49 (LOCAL_ONLY) 20130924164742
plugins/TopHatFilterExample/TopHatFilter3_.ijm
  c414145c (LOCAL_ONLY) 20130924165035
plugins/TopHatFilterExample/TopHatFilter4_.ijm
  22231bed (LOCAL_ONLY) 20130924165154
plugins/TopHatFilterExample/TopHatFilter5_.ijm
  e7e08bd1 (LOCAL_ONLY) 20130924165852
plugins/TopHatFilterExample/TopHatFilter6_.ijm
  237e209e (LOCAL_ONLY) 20130924165951
plugins/TopHatFilterExample/TopHatFilter7_.ijm
  40aee2c2 (LOCAL_ONLY) 20130924165522
plugins/TopHatFilterExample/TopHatFilter8_.ijm
  5bb56891 (LOCAL_ONLY) 20150112082701 plugins/Utilities/OutlinedToFilled2_.ijm
  5393644a (LOCAL_ONLY) 20150112092548 plugins/Utilities/OutlinedToFilled_.ijm
  fb2d1ae8 (LOCAL_ONLY) 20150310135325
plugins/Vironova/EllipseSegmentation_.ijm
  5967fdf7 (LOCAL_ONLY) 20150310104414 plugins/Vironova/ExtractFoF_.ijm
  3d6e4e28 (LOCAL_ONLY) 20150310103344 plugins/Vironova/ExtractFoV_.ijm
  1b2994d4 (LOCAL_ONLY) 20150211105136
plugins/ZebraFish/MacrophagesAndNeutrophilsLeica3_.ijm
  6b71d7ab (LOCAL_ONLY) 20150303084656
plugins/ZebraFish/MacrophagesAndNeutrophilsLeica6_.ijm
  ed08d2c4 (LOCAL_ONLY) 20150213132938
plugins/ZebraFish/MacrophagesAndNeutrophilsLeica_.ijm
  2256ab4c (LOCAL_ONLY) 20150226111914
plugins/ZebraFish/MacrophagesAndNeutrophilsZeiss_.ijm
  239bbf28 (LOCAL_ONLY) 20150303084726
plugins/ZebraFish/MacrophagesAndNeutrophils_.ijm
  9c9cac5e (LOCAL_ONLY) 20140205100348 plugins/ZebraFish/StationaryLipids2_.ijm
  632194cc (LOCAL_ONLY) 20140205135510
plugins/ZebraFish/StationaryLipids3Fixed_.ijm
  feeff8b6 (LOCAL_ONLY) 20140206165657 plugins/ZebraFish/StationaryLipids3_.ijm
  1b632288 (LOCAL_ONLY) 20141111130825
plugins/ZebraFish/StationaryLipidsPreprocess_.ijm
  000c34c2 (LOCAL_ONLY) 20141110133937
plugins/ZebraFish/StationaryLipidsPreprocess_HIDE.ijm
  97495f10 (LOCAL_ONLY) 20140206132824
plugins/ZebraFish/StationaryLipidsTest_.ijm
  c733ef91 (LOCAL_ONLY) 20130919081921 plugins/ZebraFish/StationaryLipids_.ijm
  5ac6282d (LOCAL_ONLY) 20150202164457 plugins/ZebraFish/TestMAM_.ijm
  4d57b9a6 (LOCAL_ONLY) 20140206090328 plugins/ZebraFish/ZebraFishMask3_.class
  e42d07ae (LOCAL_ONLY) 20130827105819 plugins/ZebraFish/ZebraFishMask_.class
  1ad7275e (LOCAL_ONLY) 20130827133336 plugins/_2DLabelFlag_.class
  0dfa5070 (LOCAL_ONLY) 20150108103150 plugins/imagescience.jar
  16e7eed3 (LOCAL_ONLY) 20140506143046 plugins/jars/Compiler.jar
  73f557f8 (LOCAL_ONLY) 20150108103137 plugins/syndata_.jar

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