[ImageJ-bugs] [Bug 898] New: Loading CZI File not working

[bugzilla at fiji.sc]

http://fiji.sc/bugzilla/show_bug.cgi?id=898

            Bug ID: 898
           Summary: Loading CZI File not working
           Product: Fiji
           Version: unspecified
          Hardware: PC
                OS: Windows
            Status: NEW
          Severity: normal
          Priority: P3
         Component: Bio-Formats
          Assignee: imagej-bugs at imagej.net
          Reporter: flaviu.iovanescu at gmx.de

Hi,

it seems that Fiji (Bio-formats) can’t read our czi File and right now we have
no idea why. We get the follow error message:

(Fiji Is Just) ImageJ 2.0.0-rc-13/1.49e; Java 1.6.0_24 [64-bit]; Windows 7 6.1;
28MB of 6065MB (<1%)

java.lang.NumberFormatException: empty String
    at sun.misc.FloatingDecimal.readJavaFormatString(FloatingDecimal.java:992)
    at java.lang.Double.valueOf(Double.java:475)
    at java.lang.Double.<init>(Double.java:567)
    at
loci.formats.in.ZeissCZIReader.translateInformation(ZeissCZIReader.java:1450)
    at
loci.formats.in.ZeissCZIReader.translateMetadata(ZeissCZIReader.java:1215)
    at loci.formats.in.ZeissCZIReader.initFile(ZeissCZIReader.java:699)
    at loci.formats.FormatReader.setId(FormatReader.java:1317)
    at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:494)
    at loci.plugins.in.ImportProcess.execute(ImportProcess.java:144)
    at loci.plugins.in.Importer.showDialogs(Importer.java:141)
    at loci.plugins.in.Importer.run(Importer.java:79)
    at loci.plugins.LociImporter.run(LociImporter.java:81)
    at ij.IJ.runUserPlugIn(IJ.java:202)
    at ij.IJ.runPlugIn(IJ.java:166)
    at ij.Executer.runCommand(Executer.java:131)
    at ij.Executer.run(Executer.java:64)
    at ij.IJ.run(IJ.java:272)
    at ij.IJ.run(IJ.java:250)
    at ij.macro.Functions.doRun(Functions.java:593)
    at ij.macro.Functions.doFunction(Functions.java:89)
    at ij.macro.Interpreter.doStatement(Interpreter.java:227)
    at ij.macro.Interpreter.doStatements(Interpreter.java:215)
    at ij.macro.Interpreter.run(Interpreter.java:112)
    at ij.macro.Interpreter.run(Interpreter.java:82)
    at ij.macro.MacroRunner.run(MacroRunner.java:139)
    at java.lang.Thread.run(Thread.java:662)


Link to the Image:  
https://www.dropbox.com/s/erjeucsabgzm1i2/EB3_H2B_z%20over%20time.czi



However, this one seems to work fine:

Link to the Image:    https://www.dropbox.com/s/wav004q9dvvagef/3CH_Z-Stack.czi



So the question would be what is the difference between the two Images that is
causing the problem?



Kind regards,
Flaviu

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