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<base href="http://fiji.sc/bugzilla/" />
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<body><table border="1" cellspacing="0" cellpadding="8">
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<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Loading CZI File not working"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=898">898</a>
</td>
</tr>
<tr>
<th>Summary</th>
<td>Loading CZI File not working
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>PC
</td>
</tr>
<tr>
<th>OS</th>
<td>Windows
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
<tr>
<th>Priority</th>
<td>P3
</td>
</tr>
<tr>
<th>Component</th>
<td>Bio-Formats
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>flaviu.iovanescu@gmx.de
</td>
</tr></table>
<p>
<div>
<pre>Hi,
it seems that Fiji (Bio-formats) can’t read our czi File and right now we have
no idea why. We get the follow error message:
(Fiji Is Just) ImageJ 2.0.0-rc-13/1.49e; Java 1.6.0_24 [64-bit]; Windows 7 6.1;
28MB of 6065MB (<1%)
java.lang.NumberFormatException: empty String
at sun.misc.FloatingDecimal.readJavaFormatString(FloatingDecimal.java:992)
at java.lang.Double.valueOf(Double.java:475)
at java.lang.Double.<init>(Double.java:567)
at
loci.formats.in.ZeissCZIReader.translateInformation(ZeissCZIReader.java:1450)
at
loci.formats.in.ZeissCZIReader.translateMetadata(ZeissCZIReader.java:1215)
at loci.formats.in.ZeissCZIReader.initFile(ZeissCZIReader.java:699)
at loci.formats.FormatReader.setId(FormatReader.java:1317)
at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:494)
at loci.plugins.in.ImportProcess.execute(ImportProcess.java:144)
at loci.plugins.in.Importer.showDialogs(Importer.java:141)
at loci.plugins.in.Importer.run(Importer.java:79)
at loci.plugins.LociImporter.run(LociImporter.java:81)
at ij.IJ.runUserPlugIn(IJ.java:202)
at ij.IJ.runPlugIn(IJ.java:166)
at ij.Executer.runCommand(Executer.java:131)
at ij.Executer.run(Executer.java:64)
at ij.IJ.run(IJ.java:272)
at ij.IJ.run(IJ.java:250)
at ij.macro.Functions.doRun(Functions.java:593)
at ij.macro.Functions.doFunction(Functions.java:89)
at ij.macro.Interpreter.doStatement(Interpreter.java:227)
at ij.macro.Interpreter.doStatements(Interpreter.java:215)
at ij.macro.Interpreter.run(Interpreter.java:112)
at ij.macro.Interpreter.run(Interpreter.java:82)
at ij.macro.MacroRunner.run(MacroRunner.java:139)
at java.lang.Thread.run(Thread.java:662)
Link to the Image:
<a href="https://www.dropbox.com/s/erjeucsabgzm1i2/EB3_H2B_z%20over%20time.czi">https://www.dropbox.com/s/erjeucsabgzm1i2/EB3_H2B_z%20over%20time.czi</a>
However, this one seems to work fine:
Link to the Image: <a href="https://www.dropbox.com/s/wav004q9dvvagef/3CH_Z-Stack.czi">https://www.dropbox.com/s/wav004q9dvvagef/3CH_Z-Stack.czi</a>
So the question would be what is the difference between the two Images that is
causing the problem?
Kind regards,
Flaviu</pre>
</div>
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