Ticket #215 (closed task: fixed)
Opened 2010-09-20T13:05:02-05:00
Last modified 2013-06-07T15:37:54-05:00
Integrate bf-imglib with ij.io package
| Reported by: | curtis | Owned by: | curtis |
|---|---|---|---|
| Priority: | critical | Milestone: |
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| Component: | I/O | Version: | |
| Severity: | non-issue | Keywords: | |
| Cc: | Blocked By: | ||
| Blocking: | #9, #1912 |
Description
The bf-imglib package creates imglib Image objects using Bio-Formats. We want to integrate this functionality into ImageJ's core image I/O, so e.g. File>Open produces Bio-Formats-backed ImgLibProcessor-driven ImagePluses.
Change History
comment:1 Changed 2010-09-24T17:23:25-05:00 by curtis
comment:2 Changed 2010-10-01T16:52:43-05:00 by curtis
- Milestone changed from biweekly-2010: Sep-20 to Oct-01 to biweekly-2010: Oct-04 to Oct-15
Progress continues, but Barry and I are still working through a number of issues.
comment:3 Changed 2010-10-11T16:23:35-05:00 by curtis
- Status changed from new to closed
- Resolution set to fixed
I/O integration is ostensibly complete, with all tests passing, though certain features of FileInfo have been disabled pending further thought.
comment:6 Changed 2013-06-07T15:37:54-05:00 by curtis
- Blocking 9 added
(In #9) This ticket is really about improving the infrastructure if I/O for ImageJ2. With SCIFIO, we have now done that. The 2.0.0-beta-7 release is using SCIFIO 0.1.0—File Open and File Save are now extensible—so this ticket is complete.
Remaining tickets about improving the existing I/O mechanism have been migrated to ticket #1920.
First cut at simple integration (commented out) was committed as e8c4e92c397b4076b07ffa07d35e083c184bf60f.