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Ticket #215 (closed task: fixed)

Opened 2010-09-20T13:05:02-05:00

Last modified 2013-06-07T15:37:54-05:00

Integrate bf-imglib with package

Reported by: curtis Owned by: curtis
Priority: critical Milestone: biweekly-2010: Oct-04 to Oct-15
Component: I/O Version:
Severity: non-issue Keywords:
Cc: Blocked By:
Blocking: #9, #1912


The bf-imglib package creates imglib Image objects using Bio-Formats. We want to integrate this functionality into ImageJ's core image I/O, so e.g. File>Open produces Bio-Formats-backed ImgLibProcessor-driven ImagePluses.

Change History

comment:1 Changed 2010-09-24T17:23:25-05:00 by curtis

First cut at simple integration (commented out) was committed as e8c4e92c397b4076b07ffa07d35e083c184bf60f.

comment:2 Changed 2010-10-01T16:52:43-05:00 by curtis

  • Milestone changed from biweekly-2010: Sep-20 to Oct-01 to biweekly-2010: Oct-04 to Oct-15

Progress continues, but Barry and I are still working through a number of issues.

comment:3 Changed 2010-10-11T16:23:35-05:00 by curtis

  • Status changed from new to closed
  • Resolution set to fixed

I/O integration is ostensibly complete, with all tests passing, though certain features of FileInfo have been disabled pending further thought.

comment:4 Changed 2012-02-24T13:59:34-06:00 by curtis

  • Blocking 9 added

comment:5 Changed 2013-06-05T15:11:00-05:00 by bdezonia

  • Blocking 1912 added; 9 removed

comment:6 Changed 2013-06-07T15:37:54-05:00 by curtis

  • Blocking 9 added

(In #9) This ticket is really about improving the infrastructure if I/O for ImageJ2. With SCIFIO, we have now done that. The 2.0.0-beta-7 release is using SCIFIO 0.1.0—File Open and File Save are now extensible—so this ticket is complete.

Remaining tickets about improving the existing I/O mechanism have been migrated to ticket #1920.