ImageJ+MATLAB
Reunited
Mark Hiner
, UW-Madison
LOCI
Background & Motivation
MIJ
Miji.m
ImageJ2
ImageJ
-MATLAB
the update site
ImageJ.m
entry point
MATLAB ↔ ImageJ
Converters
Plugin type:
MATLABCommands
MATLAB scripting
MATLAB + ImageJ
Starts like Miji
MATLAB + ImageJ
Makes Fiji happy
MATLAB + ImageJ
Adds extensible commands
MATLAB + ImageJ
Uses ImageJ's N-Dimensional data model
MATLAB + ImageJ
Uses ImageJ's N-Dimensional data model
MATLAB + ImageJ
Converters preserve data
ImageJ + MATLAB
MATLAB in the Script Editor
ImageJ + MATLAB
Automatically populate matrix parameters...
ImageJ + MATLAB
... and convert back to images
putting it all together
What's next?
More converters
More MATLABCommands
More templates
ImageJ+MATLAB Reunited Mark Hiner, UW-Madison LOCI
