ImageJ+MATLAB
Reunited
Mark Hiner, UW-Madison LOCI
Background & Motivation
| MIJ |
|
|
| Miji.m |
|
|
| ImageJ2 |
|
|
ImageJ-MATLAB
the update site
- ImageJ.m entry point
- MATLAB ↔ ImageJ Converters
- Plugin type: MATLABCommands
- MATLAB scripting
MATLAB + ImageJ
Starts like Miji
MATLAB + ImageJ
Makes Fiji happy
MATLAB + ImageJ
Adds extensible commands
MATLAB + ImageJ
Uses ImageJ's N-Dimensional data model
MATLAB + ImageJ
Uses ImageJ's N-Dimensional data model
MATLAB + ImageJ
Converters preserve data
ImageJ + MATLAB
MATLAB in the Script Editor
ImageJ + MATLAB
Automatically populate matrix parameters...
ImageJ + MATLAB
... and convert back to images
putting it all together
What's next?
- More converters
- More MATLABCommands
- More templates