[ImageJ-devel] opening a tif file problem
Mohamed Tleis
mohammedtleis at hotmail.com
Tue Jul 30 11:33:38 CDT 2013
Dear Developers,
I wonder whether this is important for you.
Before the latest updates, I used to be able to open tif files with ij2.
Now I am getting an error (see below for the warnings I get when loading
ij launcher and the error after trying to open a "tif" file).
Note that If I switch to Legacy mode, open the image, then back into
modern mode , things work fine.
However, I still am wondering if the Invalid services in the warning
messages is something specific to my machine. Am I missing some package?
run:
...
log4j:WARN No appenders could be found for logger (io.scif.Format).
log4j:WARN Please initialize the log4j system properly.
...
[WARNING] Invalid service: imagej.data.lut.DefaultLUTService
....
[WARNING] Overridden plugin ij.plugin.AboutBox is blacklisted
[WARNING] Overridden plugin ij.plugin.Commands("quit") is blacklisted
...
[WARNING] Invalid service: io.scif.services.LuraWaveServiceImpl
[WARNING] Invalid service: ome.xml.services.DefaultOMEXMLMetadataService
[WARNING] Invalid service: ome.xml.services.OMEXMLServiceImpl
...
// Trying to open a tif file
[ERROR] Module threw exception
java.lang.NullPointerException
at imagej.data.lut.io.LUTIOPlugin.supportsOpen(LUTIOPlugin.java:66)
at imagej.io.DefaultIOService.getOpener(DefaultIOService.java:68)
at imagej.io.DefaultIOService.open(DefaultIOService.java:87)
at imagej.core.commands.io.OpenFile.run(OpenFile.java:87)
at imagej.command.CommandModule.run(CommandModule.java:163)
at imagej.module.ModuleRunner.run(ModuleRunner.java:169)
at imagej.module.ModuleRunner.call(ModuleRunner.java:126)
at imagej.module.ModuleRunner.call(ModuleRunner.java:67)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:722)
Best Regards,
Mohamed Tleis
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