[ImageJ-devel] Build failed in Jenkins: ImageJ #3229

Fri May 25 15:27:47 CDT 2012

The IJ2 build could not locate very recently updated imglib files. This
should build fine at the next opportunity. I'll kick off a job when I get a
chance.

On Fri, May 25, 2012 at 3:17 PM, <jenkins at imagej.net> wrote:

> See <http://jenkins.imagej.net/job/ImageJ/3229/changes>
>
> Changes:
>
> [Barry DeZonia] Allow overlays to be duplicated and moved
>
> ------------------------------------------
> [...truncated 234 lines...]
> [INFO ] Created service: imagej.ext.plugin.DefaultPluginService
> [INFO ] Created service: imagej.ext.display.DefaultDisplayService
> [INFO ] Created service: imagej.event.DefaultEventService
> [INFO ] Created service: imagej.object.DefaultObjectService
> [INFO ] Created service: imagej.thread.DefaultThreadService
> [INFO ] Created service: imagej.ext.module.DefaultModuleService
> [INFO ] Found 10 plugins.
> [INFO ] Created service: imagej.ext.plugin.DefaultPluginService
> [INFO ] Created service: imagej.ext.display.DefaultDisplayService
> Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.328 sec
> Running imagej.ext.menu.ShadowMenuTest
> [INFO ] Created service: imagej.event.DefaultEventService
> [INFO ] Created service: imagej.thread.DefaultThreadService
> [INFO ] Created service: imagej.ext.module.DefaultModuleService
> [INFO ] Found 10 plugins.
> [INFO ] Created service: imagej.ext.plugin.DefaultPluginService
> [INFO ] Created service: imagej.ext.menu.DefaultMenuService
> [INFO ] Created service: imagej.event.DefaultEventService
> [INFO ] Created service: imagej.thread.DefaultThreadService
> [INFO ] Created service: imagej.ext.module.DefaultModuleService
> [INFO ] Found 10 plugins.
> [INFO ] Created service: imagej.ext.plugin.DefaultPluginService
> [INFO ] Created service: imagej.ext.menu.DefaultMenuService
> [INFO ] Created service: imagej.event.DefaultEventService
> [INFO ] Created service: imagej.thread.DefaultThreadService
> [INFO ] Created service: imagej.ext.module.DefaultModuleService
> [INFO ] Found 10 plugins.
> [INFO ] Created service: imagej.ext.plugin.DefaultPluginService
> [INFO ] Created service: imagej.ext.menu.DefaultMenuService
> [INFO ] Created service: imagej.event.DefaultEventService
> [INFO ] Created service: imagej.thread.DefaultThreadService
> [INFO ] Created service: imagej.ext.module.DefaultModuleService
> [INFO ] Found 10 plugins.
> [INFO ] Created service: imagej.ext.plugin.DefaultPluginService
> [INFO ] Created service: imagej.ext.menu.DefaultMenuService
> Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.035 sec
>
> Results :
>
> Tests run: 7, Failures: 0, Errors: 0, Skipped: 0
>
> [INFO] [jar:jar {execution: default-jar}]
> [INFO] Building jar:
> /data/devel/jenkins/jobs/ImageJ/workspace/core/ext/target/ij-ext-2.0.0-SNAPSHOT.jar
> [INFO] [install:install {execution: default-install}]
> [INFO] Installing
> /data/devel/jenkins/jobs/ImageJ/workspace/core/ext/target/ij-ext-2.0.0-SNAPSHOT.jar
> to
> /var/lib/jenkins/.m2/repository/net/imagej/ij-ext/2.0.0-SNAPSHOT/ij-ext-2.0.0-SNAPSHOT.jar
> [INFO] [deploy:deploy {execution: default-deploy}]
> [INFO] Retrieving previous build number from imagej.snapshots
> Uploading:
> http://maven.imagej.net/content/repositories/snapshots/net/imagej/ij-ext/2.0.0-SNAPSHOT/ij-ext-2.0.0-20120525.201704-326.jar
> May 25, 2012 3:17:15 PM
> org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
> INFO: basic authentication scheme selected
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> 157K uploaded  (ij-ext-2.0.0-20120525.201704-326.jar)
> [INFO] Retrieving previous metadata from imagej.snapshots
> [INFO] Uploading repository metadata for: 'snapshot
> net.imagej:ij-ext:2.0.0-SNAPSHOT'
> May 25, 2012 3:17:15 PM
> org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
> INFO: basic authentication scheme selected
> [INFO] Retrieving previous metadata from imagej.snapshots
> [INFO] Uploading repository metadata for: 'artifact net.imagej:ij-ext'
> May 25, 2012 3:17:15 PM
> org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
> INFO: basic authentication scheme selected
> [INFO] Uploading project information for ij-ext 2.0.0-20120525.201704-326
> May 25, 2012 3:17:15 PM
> org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
> INFO: basic authentication scheme selected
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Building ImageJ Data Model
> [INFO]    task-segment: [clean, deploy]
> [INFO]
> ------------------------------------------------------------------------
> [INFO] [clean:clean {execution: default-clean}]
> [INFO] Deleting /data/devel/jenkins/jobs/ImageJ/workspace/core/data/target
> [INFO] [buildnumber:create {execution: default}]
> [debug] execute contextualize
> [INFO] [resources:resources {execution: default-resources}]
> [INFO] Using 'UTF-8' encoding to copy filtered resources.
> [INFO] skip non existing resourceDirectory
> /data/devel/jenkins/jobs/ImageJ/workspace/core/data/src/main/resources
> [INFO] snapshot net.imglib2:imglib2:2.0.0-SNAPSHOT: checking for updates
> from imagej.releases
> [INFO] snapshot net.imglib2:imglib2:2.0.0-SNAPSHOT: checking for updates
> from imagej.snapshots
> [INFO] snapshot net.imglib2:imglib2:2.0.0-SNAPSHOT: checking for updates
> from loci.releases
> [INFO] snapshot net.imglib2:imglib2:2.0.0-SNAPSHOT: checking for updates
> from loci.snapshots
> [INFO] snapshot net.imglib2:imglib2:2.0.0-SNAPSHOT: checking for updates
> from imagej.thirdparty
> [INFO] snapshot net.imglib2:imglib2:2.0.0-SNAPSHOT: checking for updates
> from java.net
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from imagej.releases
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from imagej.snapshots
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from imagej.releases
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from imagej.snapshots
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from loci.releases
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from loci.snapshots
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from imagej.thirdparty
> [INFO] snapshot net.imglib2:pom-imglib2:2.0.0-SNAPSHOT: checking for
> updates from java.net
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from imagej.releases
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from imagej.snapshots
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from imagej.releases
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from imagej.snapshots
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from loci.releases
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from loci.snapshots
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from imagej.thirdparty
> [INFO] snapshot net.imglib2:pom-imglib:2.0.0-SNAPSHOT: checking for
> updates from java.net
> [INFO] snapshot net.imglib2:imglib2-ops:2.0.0-SNAPSHOT: checking for
> updates from imagej.releases
> [INFO] snapshot net.imglib2:imglib2-ops:2.0.0-SNAPSHOT: checking for
> updates from imagej.snapshots
> [INFO] snapshot net.imglib2:imglib2-ops:2.0.0-SNAPSHOT: checking for
> updates from loci.releases
> [INFO] snapshot net.imglib2:imglib2-ops:2.0.0-SNAPSHOT: checking for
> updates from loci.snapshots
> [INFO] snapshot net.imglib2:imglib2-ops:2.0.0-SNAPSHOT: checking for
> updates from imagej.thirdparty
> [INFO] snapshot net.imglib2:imglib2-ops:2.0.0-SNAPSHOT: checking for
> updates from java.net
> [INFO] snapshot net.imglib2:imglib2-algorithms:2.0.0-SNAPSHOT: checking
> for updates from imagej.releases
> [INFO] snapshot net.imglib2:imglib2-algorithms:2.0.0-SNAPSHOT: checking
> for updates from imagej.snapshots
> [INFO] snapshot net.imglib2:imglib2-algorithms:2.0.0-SNAPSHOT: checking
> for updates from loci.releases
> [INFO] snapshot net.imglib2:imglib2-algorithms:2.0.0-SNAPSHOT: checking
> for updates from loci.snapshots
> [INFO] snapshot net.imglib2:imglib2-algorithms:2.0.0-SNAPSHOT: checking
> for updates from imagej.thirdparty
> [INFO] snapshot net.imglib2:imglib2-algorithms:2.0.0-SNAPSHOT: checking
> for updates from java.net
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from imagej.releases
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from imagej.snapshots
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from imagej.releases
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from imagej.snapshots
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from loci.releases
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from loci.snapshots
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from imagej.thirdparty
> [INFO] snapshot net.imglib2:pom-imglib2-algorithms:2.0.0-SNAPSHOT:
> checking for updates from java.net
> [INFO] [compiler:compile {execution: default-compile}]
> [INFO] Compiling 74 source files to
> /data/devel/jenkins/jobs/ImageJ/workspace/core/data/target/classes
> [INFO] -------------------------------------------------------------
> [ERROR] COMPILATION ERROR :
> [INFO] -------------------------------------------------------------
> [ERROR] BinaryMaskOverlay.java:[118,28] cannot find symbol
> symbol  : method getOrigin()
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> [ERROR] BinaryMaskOverlay.java:[203,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> [ERROR] BinaryMaskOverlay.java:[220,65] cannot find symbol
> symbol  : method getImg()
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> [ERROR] BinaryMaskOverlay.java:[237,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> [ERROR] AngleOverlay.java:[192,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.RectangleRegionOfInterest
> [ERROR] PointOverlay.java:[148,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.RectangleRegionOfInterest
> [ERROR] PolygonOverlay.java:[123,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.PolygonRegionOfInterest
> [ERROR] CompositeOverlay.java:[90,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.CompositeRegionOfInterest
> [INFO] 8 errors
> [INFO] -------------------------------------------------------------
> [INFO]
> ------------------------------------------------------------------------
> [ERROR] BUILD FAILURE
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Compilation failure
>
> BinaryMaskOverlay.java:[118,28] cannot find symbol
> symbol  : method getOrigin()
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> BinaryMaskOverlay.java:[203,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> BinaryMaskOverlay.java:[220,65] cannot find symbol
> symbol  : method getImg()
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> BinaryMaskOverlay.java:[237,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.BinaryMaskRegionOfInterest<U,V>
> AngleOverlay.java:[192,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.RectangleRegionOfInterest
> PointOverlay.java:[148,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.RectangleRegionOfInterest
> PolygonOverlay.java:[123,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.PolygonRegionOfInterest
> CompositeOverlay.java:[90,23] cannot find symbol
> symbol  : method move(double[])
> location: class net.imglib2.roi.CompositeRegionOfInterest
>
> [INFO]
> ------------------------------------------------------------------------
> [INFO] For more information, run Maven with the -e switch
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Total time: 25 seconds
> [INFO] Finished at: Fri May 25 15:17:21 CDT 2012
> [INFO] Final Memory: 80M/1467M
> [INFO]
> ------------------------------------------------------------------------
> Archiving artifacts
> Performance: No threshold configured for making the test unstable
> Performance: No threshold configured for making the test failure
> Performance: Recording JUnit reports '**/TEST-*.xml'
> Performance: Parsing JUnit report file
> TEST-imagej.object.ObjectIndexTest.xml
> Performance: Parsing JUnit report file TEST-imagej.util.ColorRGBTest.xml
> Performance: Parsing JUnit report file TEST-imagej.util.FileUtilsTest.xml
> Performance: Parsing JUnit report file TEST-imagej.util.UnitUtilsTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.ext.display.DisplayTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.ext.menu.ShadowMenuTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.legacy.LegacyImageMapTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.legacy.OverlayHarmonizerTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.legacy.translate.LegacyUtilsTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.updater.core.UpdaterTest.xml
> Performance: Parsing JUnit report file
> TEST-imagej.updater.UpdaterGUITest.xml
> Performance: File TEST-imagej.object.ObjectIndexTest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.util.ColorRGBTest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.util.FileUtilsTest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.util.UnitUtilsTest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.ext.display.DisplayTest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.ext.menu.ShadowMenuTest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.legacy.LegacyImageMapTest.xml reported 0.0%
> of errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.legacy.OverlayHarmonizerTest.xml reported
> 0.0% of errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.legacy.translate.LegacyUtilsTest.xml
> reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.updater.core.UpdaterTest.xml reported 0.0%
> of errors [SUCCESS]. Build status is: FAILURE
> Performance: File TEST-imagej.updater.UpdaterGUITest.xml reported 0.0% of
> errors [SUCCESS]. Build status is: FAILURE
>
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