[ImageJ-devel] Build failed in Jenkins: Upload-IJ1-Into-Fiji #1
jenkins at loci.wisc.edu
jenkins at loci.wisc.edu
Tue Mar 27 22:27:50 CDT 2012
See <http://jenkins.imagej.net/job/Upload-IJ1-Into-Fiji/1/>
------------------------------------------
[...truncated 26 lines...]
No change to record in branch origin/master
[workspace] $ /bin/sh -xe /tmp/hudson6713021136044930185.sh
+ IMAGEJA_URL=git://fiji.sc/ImageJA.git
+ FIJI_URL=origin
+ test ! -d modules/ImageJA/.git
+ git ls-remote git://fiji.sc/ImageJA.git refs/heads/master
+ sed s/\t.*//
+ CURRENT_SHA1=0570cae1fb7c67a8563d63301bd934b4c5139a37
+ git fetch origin master
>From fiji.sc:/srv/git/fiji
* branch master -> FETCH_HEAD
+ git rev-parse FETCH_HEAD:modules/ImageJA
+ COMMITTED_SHA1=0cc0d5f147804d2b211f99da821aa9ed57cb8460
+ test 0570cae1fb7c67a8563d63301bd934b4c5139a37 != 0cc0d5f147804d2b211f99da821aa9ed57cb8460
+ git checkout master
Switched to branch 'master'
+ git merge --ff-only FETCH_HEAD
Already up-to-date.
+ cd modules/ImageJA
+ git checkout master
Previous HEAD position was 0cc0d5f... Synchronize with ImageJ 1.46i
Switched to branch 'master'
+ git pull --ff-only git://fiji.sc/ImageJA.git master
>From git://fiji.sc/ImageJA
* branch master -> FETCH_HEAD
Already up-to-date.
+ git pull --ff-only origin master
>From fiji.sc:/srv/git/fiji
* branch master -> FETCH_HEAD
Already up-to-date.
+ ./Build.sh jars/ij.jar plugins/Fiji_Updater.jar
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building jars/fake.jar <- src-plugins/fake/fiji/build/Special.java...
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building <- jars/fake.jar
Building jars/javassist.jar <- modules/javassist/
Warning: artifactId mismatch in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/imglib/imglib2/examples/GameOfDeath2's parent: imglib-pom-imglib2-examples != imglib-pom-imglib2
Compiling 211 files in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/javassist
Building jars/ij-launcher.jar <- src-plugins/ij-launcher/imagej/Cl...
Note: src-plugins/ij-launcher/imagej/ClassLauncher.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building jars/javac.jar <- src-plugins/javac/com/sun/tools/javac/m...
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:271: warning: sun.reflect.annotation.ExceptionProxy is internal proprietary API and may be removed in a future release
private static class MirroredTypeExceptionProxy extends ExceptionProxy {
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:307: warning: sun.reflect.annotation.ExceptionProxy is internal proprietary API and may be removed in a future release
private static class MirroredTypesExceptionProxy extends ExceptionProxy {
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:84: warning: sun.reflect.annotation.AnnotationParser is internal proprietary API and may be removed in a future release
return AnnotationParser.annotationForMap(annoType,
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:164: warning: sun.reflect.annotation.ExceptionProxy is internal proprietary API and may be removed in a future release
if (!(value instanceof ExceptionProxy) &&
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:165: warning: sun.reflect.annotation.AnnotationType is internal proprietary API and may be removed in a future release
!AnnotationType.invocationHandlerReturnType(returnClass)
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:201: warning: sun.reflect.annotation.ExceptionProxy is internal proprietary API and may be removed in a future release
if (value == null || value instanceof ExceptionProxy) {
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:225: warning: sun.reflect.annotation.EnumConstantNotPresentExceptionProxy is internal proprietary API and may be removed in a future release
value = new EnumConstantNotPresentExceptionProxy(
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:252: warning: sun.reflect.annotation.ExceptionProxy is internal proprietary API and may be removed in a future release
value = new ExceptionProxy() {
^
src-plugins/javac/com/sun/tools/javac/model/AnnotationProxyMaker.java:252: warning: sun.reflect.annotation.ExceptionProxy is internal proprietary API and may be removed in a future release
value = new ExceptionProxy() {
^
9 warnings
Building jars/ij.jar <- jars/javac.jar modules/ImageJA/
Warning: artifactId mismatch in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/imglib/imglib2/examples/GameOfDeath2's parent: imglib-pom-imglib2-examples != imglib-pom-imglib2
Compiling 309 files in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/plugin/filter/Skeletonize3D.java:17: warning: unmappable character for encoding ASCII
* Image Processing, 56(6):462???478, 1994." Based on the ITK version from
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/plugin/filter/Skeletonize3D.java:17: warning: unmappable character for encoding ASCII
* Image Processing, 56(6):462???478, 1994." Based on the ITK version from
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/plugin/filter/Skeletonize3D.java:17: warning: unmappable character for encoding ASCII
* Image Processing, 56(6):462???478, 1994." Based on the ITK version from
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:189: warning: unmappable character for encoding ASCII
// ???at valley are unsuitable for this method.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:189: warning: unmappable character for encoding ASCII
// ???at valley are unsuitable for this method.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:189: warning: unmappable character for encoding ASCII
// ???at valley are unsuitable for this method.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:612: warning: unmappable character for encoding ASCII
// Threshold t is such that yt???1 > yt ??? yt+1.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:612: warning: unmappable character for encoding ASCII
// Threshold t is such that yt???1 > yt ??? yt+1.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:612: warning: unmappable character for encoding ASCII
// Threshold t is such that yt???1 > yt ??? yt+1.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:612: warning: unmappable character for encoding ASCII
// Threshold t is such that yt???1 > yt ??? yt+1.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:612: warning: unmappable character for encoding ASCII
// Threshold t is such that yt???1 > yt ??? yt+1.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:612: warning: unmappable character for encoding ASCII
// Threshold t is such that yt???1 > yt ??? yt+1.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:614: warning: unmappable character for encoding ASCII
// ???at valley are unsuitable for this method.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:614: warning: unmappable character for encoding ASCII
// ???at valley are unsuitable for this method.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/process/AutoThresholder.java:614: warning: unmappable character for encoding ASCII
// ???at valley are unsuitable for this method.
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/measure/Minimizer.java:19: warning: unmappable character for encoding ASCII
* SIAM J. Optim. 9, 112???147 (1998).
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/measure/Minimizer.java:19: warning: unmappable character for encoding ASCII
* SIAM J. Optim. 9, 112???147 (1998).
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/ij/measure/Minimizer.java:19: warning: unmappable character for encoding ASCII
* SIAM J. Optim. 9, 112???147 (1998).
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:108: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
Method m = c.getMethod("isInitialized", null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:109: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
Boolean b= (Boolean)m.invoke(null, null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:111: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
m= c.getMethod("open", null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:112: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
m.invoke(null, null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:127: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
m = c.getMethod("getNaturalBounds", null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:128: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
Object rect= m.invoke(importer, null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:132: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
m = rect.getClass().getMethod("getWidth", null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:133: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
Integer width= (Integer)m.invoke(rect, null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:134: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
m = rect.getClass().getMethod("getHeight", null);
^
/data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/ImageJA/src/main/java/MacClipboard.java:135: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
Integer height= (Integer)m.invoke(rect, null);
^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
28 warnings
Building src-plugins/fiji-compat/icon.png <- images/icon.png
Building jars/fiji-compat.jar <- src-plugins/fiji-compat/fiji/Plug...
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building ImageJ <- ImageJ.c
Building <- ImageJ
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Warning: artifactId mismatch in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/imglib/imglib2/examples/GameOfDeath2's parent: imglib-pom-imglib2-examples != imglib-pom-imglib2
Building jars/javassist.jar <- modules/javassist/
Warning: artifactId mismatch in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/imglib/imglib2/examples/GameOfDeath2's parent: imglib-pom-imglib2-examples != imglib-pom-imglib2
Building jars/ij.jar <- jars/javac.jar modules/ImageJA/
Building jars/fiji-compat.jar <- src-plugins/fiji-compat/fiji/Plug...
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Building <- ImageJ
Warning: artifactId mismatch in /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/imglib/imglib2/examples/GameOfDeath2's parent: imglib-pom-imglib2-examples != imglib-pom-imglib2
Building jars/ij.jar <- jars/javac.jar modules/ImageJA/
Building jars/jsch.jar <- modules/jsch/
Building in modules/jsch/
Building dist/lib/jsch-0.1.44.jar <- src/com/jcraft/jsch/Buffer.ja...
Buildfile: build.xml
init:
[mkdir] Created dir: /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/jsch/build
compile:
[javac] Compiling 103 source files to /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/jsch/build
[javac] Note: Some input files use unchecked or unsafe operations.
[javac] Note: Recompile with -Xlint:unchecked for details.
dist:
[mkdir] Created dir: /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/jsch/dist/lib
[jar] Building jar: /data/devel/jenkins/jobs/Upload-IJ1-Into-Fiji/workspace/modules/jsch/dist/lib/jsch-0.1.44.jar
BUILD SUCCESSFUL
Total time: 2 seconds
Building jsch.jar <- dist/lib/jsch-0.1.44.jar
Leaving modules/jsch/
Building plugins/Fiji_Updater.jar <- src-plugins/Fiji_Updater/fiji...
Building <- jars/ij.jar plugins/Fiji_Updater.jar
+ git commit -m Soft-commit ImageJA modules/ImageJA
[master 09ec09f] Soft-commit ImageJA
Committer: Jenkins <jenkins at dev.loci.wisc.edu>
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You can suppress this message by setting them explicitly:
git config --global user.name "Your Name"
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git commit --amend --reset-author
1 files changed, 1 insertions(+), 1 deletions(-)
+ git push origin HEAD:master
To hudson-imagej at fiji.sc:/srv/git/fiji.git
e6d2e90..09ec09f HEAD -> master
+ mv jars/tools.jar ./
mv: cannot stat `jars/tools.jar': No such file or directory
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