[ImageJ-devel] Build failed in Jenkins: ImgLib-daily #408

Tue Mar 27 00:34:07 CDT 2012

See <http://jenkins.imagej.net/job/ImgLib-daily/408/changes>

Changes:

[Jean-Yves Tinevez] imglib1: DevUtil: added function to generate Image from arrays

[Jean-Yves Tinevez] imglib1: DevUtil: added function to generate Image from arrays

[Jean-Yves Tinevez] Perona & Malik Anisotropic diffusion

[Jean-Yves Tinevez] Test for Anisotropic diffusion

[Jean-Yves Tinevez] Special cursors using physical coordinates as bounds

[Jean-Yves Tinevez] Regional finder

[Jean-Yves Tinevez] Special cursors: remove tests from java file to allow compiling

[Jean-Yves Tinevez] Anisotropic diffusion: move test to test folder

[Jean-Yves Tinevez] Gaussian peak fitter: fit n-D gaussians on peaks

[Jean-Yves Tinevez] PickImagePeaks: add a flag to allow border peaks to be found

[Jean-Yves Tinevez] imglib2/algo: Test performance of various iteration methods

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128 warnings
[WARNING] Javadoc Warnings
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[WARNING] Type.java:101: warning - Tag @link: reference not found: Cell
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[WARNING] Type.java:101: warning - Tag @link: reference not found: CellDirectAccessContainer
[WARNING] Type.java:101: warning - Tag @link: reference not found: Cell
[WARNING] Type.java:101: warning - Tag @link: reference not found: Cell
[WARNING] Type.java:101: warning - Tag @link: reference not found: CellDirectAccessContainer
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[WARNING] ConstantLocalizableByDimOutOfBoundsCursor.java:45: warning - Tag @link: reference not found: LocalizableByDimCursorOutOfBoundsCursor
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[INFO] Building ImgLib1 Algorithms
[INFO]    task-segment: [clean, deploy, site]
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[INFO] [clean:clean {execution: default-clean}]
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[debug] execute contextualize
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[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR : 
[INFO] -------------------------------------------------------------
[ERROR] AnistotropicDiffusion_TestDrive.java:[3,9] package ij does not exist
[ERROR] AnistotropicDiffusion_TestDrive.java:[4,9] package ij does not exist
[ERROR] AnistotropicDiffusion_TestDrive.java:[11,41] package mpicbg.imglib.image.display.imagej does not exist
[ERROR] GaussianFitTestDrive.java:[3,9] package ij does not exist
[ERROR] GaussianFitTestDrive.java:[4,13] package ij.gui does not exist
[ERROR] GaussianFitTestDrive.java:[5,13] package ij.gui does not exist
[ERROR] AnistotropicDiffusion_TestDrive.java:[20,4] package ij does not exist
[ERROR] AnistotropicDiffusion_TestDrive.java:[22,2] cannot find symbol
symbol  : class ImagePlus
location: class AnistotropicDiffusion_TestDrive
[ERROR] AnistotropicDiffusion_TestDrive.java:[22,18] cannot find symbol
symbol  : variable IJ
location: class AnistotropicDiffusion_TestDrive
[ERROR] AnistotropicDiffusion_TestDrive.java:[24,37] cannot find symbol
symbol  : variable ImageJFunctions
location: class AnistotropicDiffusion_TestDrive
[ERROR] GaussianFitTestDrive.java:[62,4] package ij does not exist
[ERROR] GaussianFitTestDrive.java:[63,8] cannot find symbol
symbol  : class ImagePlus
location: class GaussianFitTestDrive
[ERROR] GaussianFitTestDrive.java:[63,58] package mpicbg.imglib.image.display.imagej does not exist
[ERROR] GaussianFitTestDrive.java:[68,8] cannot find symbol
symbol  : class Overlay
location: class GaussianFitTestDrive
[ERROR] GaussianFitTestDrive.java:[68,30] cannot find symbol
symbol  : class Overlay
location: class GaussianFitTestDrive
[ERROR] GaussianFitTestDrive.java:[128,22] cannot find symbol
symbol: class EllipseRoi
						overlay.add(new EllipseRoi(x1, y1, x2, y2, ar));
[INFO] 16 errors 
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[ERROR] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Compilation failure

AnistotropicDiffusion_TestDrive.java:[3,9] package ij does not exist
AnistotropicDiffusion_TestDrive.java:[4,9] package ij does not exist
AnistotropicDiffusion_TestDrive.java:[11,41] package mpicbg.imglib.image.display.imagej does not exist
GaussianFitTestDrive.java:[3,9] package ij does not exist
GaussianFitTestDrive.java:[4,13] package ij.gui does not exist
GaussianFitTestDrive.java:[5,13] package ij.gui does not exist
AnistotropicDiffusion_TestDrive.java:[20,4] package ij does not exist
AnistotropicDiffusion_TestDrive.java:[22,2] cannot find symbol
symbol  : class ImagePlus
location: class AnistotropicDiffusion_TestDrive
AnistotropicDiffusion_TestDrive.java:[22,18] cannot find symbol
symbol  : variable IJ
location: class AnistotropicDiffusion_TestDrive
AnistotropicDiffusion_TestDrive.java:[24,37] cannot find symbol
symbol  : variable ImageJFunctions
location: class AnistotropicDiffusion_TestDrive
GaussianFitTestDrive.java:[62,4] package ij does not exist
GaussianFitTestDrive.java:[63,8] cannot find symbol
symbol  : class ImagePlus
location: class GaussianFitTestDrive
GaussianFitTestDrive.java:[63,58] package mpicbg.imglib.image.display.imagej does not exist
GaussianFitTestDrive.java:[68,8] cannot find symbol
symbol  : class Overlay
location: class GaussianFitTestDrive
GaussianFitTestDrive.java:[68,30] cannot find symbol
symbol  : class Overlay
location: class GaussianFitTestDrive
GaussianFitTestDrive.java:[128,22] cannot find symbol
symbol: class EllipseRoi
						overlay.add(new EllipseRoi(x1, y1, x2, y2, ar));

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[INFO] For more information, run Maven with the -e switch
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[INFO] Total time: 2 minutes 43 seconds
[INFO] Finished at: Tue Mar 27 00:34:00 CDT 2012
[INFO] Final Memory: 116M/1394M
[INFO] ------------------------------------------------------------------------
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