[ImageJ-builds] Build failed in Jenkins: Sholl-Analysis #129

jenkins at imagej.net jenkins at imagej.net
Mon Oct 10 19:09:33 CDT 2016


See <http://jenkins.imagej.net/job/Sholl-Analysis/129/changes>

Changes:

[tiagoalvespedrosa] Start next release cycle

[tiagoalvespedrosa] Update release notes

------------------------------------------
Started by an SCM change
Building remotely on maven in workspace <http://jenkins.imagej.net/job/Sholl-Analysis/ws/>
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url git://github.com/tferr/ASA # timeout=10
Fetching upstream changes from git://github.com/tferr/ASA
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress git://github.com/tferr/ASA +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 7ea3c25fd03cbddf82acdee22ecec63b550d939a (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 7ea3c25fd03cbddf82acdee22ecec63b550d939a
 > git rev-list 0d82982e6b55ac3ff4bd60981e5390f2a147d7b9 # timeout=10
 > git tag -a -f -m Jenkins Build #129 jenkins-Sholl-Analysis-129 # timeout=10
[Sholl-Analysis] $ /bin/sh -xe /tmp/hudson4496750887518977751.sh
+ git clean -dfx
Removing maven-helper.sh
Removing target/
Copied 1 artifact from "SciJava-scripts" build number 143
[Sholl-Analysis] $ /bin/sh -xe /tmp/hudson508307147474778262.sh
+ sh maven-helper.sh gav-from-pom pom.xml
+ ALT=imagej.releases::default::http://maven.imagej.net/content/repositories/releases
+ mvn -U -DaltDeploymentRepository=imagej.releases::default::http://maven.imagej.net/content/repositories/releases deploy
OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=256m; support was removed in 8.0
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for ca.mcgill:Sholl_Analysis:jar:3.6.7_SNAPSHOT
[WARNING] 'version' uses an unsupported snapshot version format, should be '*-SNAPSHOT' instead. @ line 17, column 11
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Sholl Analysis 3.6.7_SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-enforcer-plugin:1.4.1:enforce (enforce-rules) @ Sholl_Analysis ---
[INFO] 
[INFO] --- build-helper-maven-plugin:1.12:regex-property (sanitize-version) @ Sholl_Analysis ---
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.4:create (default) @ Sholl_Analysis ---
[INFO] Executing: /bin/sh -c cd '/data/devel/jenkins-maven/workspace/Sholl-Analysis' && 'git' 'rev-parse' '--verify' 'HEAD'
[INFO] Working directory: /data/devel/jenkins-maven/workspace/Sholl-Analysis
[INFO] Storing buildNumber: 7ea3c25fd03cbddf82acdee22ecec63b550d939a at timestamp: 1476144564152
[WARNING] Cannot get the branch information from the git repository: 
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref

[INFO] Executing: /bin/sh -c cd '/data/devel/jenkins-maven/workspace/Sholl-Analysis' && 'git' 'rev-parse' '--verify' 'HEAD'
[INFO] Working directory: /data/devel/jenkins-maven/workspace/Sholl-Analysis
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] 
[INFO] --- scijava-maven-plugin:0.5.1:set-rootdir (set-rootdir) @ Sholl_Analysis ---
[INFO] Setting rootdir: /data/devel/jenkins-maven/workspace/Sholl-Analysis
[INFO] 
[INFO] --- maven-resources-plugin:3.0.1:resources (default-resources) @ Sholl_Analysis ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 3 resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.5.1:compile (default-compile) @ Sholl_Analysis ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 10 source files to /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/classes
[INFO] 
[INFO] --- maven-resources-plugin:3.0.1:testResources (default-testResources) @ Sholl_Analysis ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins-maven/workspace/Sholl-Analysis/src/test/resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.5.1:testCompile (default-testCompile) @ Sholl_Analysis ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-surefire-plugin:2.19.1:test (default-test) @ Sholl_Analysis ---
[INFO] No tests to run.
[INFO] 
[INFO] --- maven-jar-plugin:2.6:jar (default-jar) @ Sholl_Analysis ---
[INFO] Building jar: /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT.jar
[INFO] 
[INFO] --- maven-source-plugin:3.0.1:jar-no-fork (default) @ Sholl_Analysis ---
[INFO] Building jar: /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT-sources.jar
[INFO] 
[INFO] --- maven-source-plugin:3.0.1:jar-no-fork (attach-sources) @ Sholl_Analysis ---
[INFO] Building jar: /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT-sources.jar
[WARNING] Artifact ca.mcgill:Sholl_Analysis:java-source:sources:3.6.7_SNAPSHOT already attached to project, ignoring duplicate
[INFO] 
[INFO] --- maven-javadoc-plugin:2.10.4:jar (attach-javadocs) @ Sholl_Analysis ---
[INFO] 
Loading source files for package sholl...
Loading source files for package sholl.gui...
Constructing Javadoc information...
Standard Doclet version 1.8.0_91
Building tree for all the packages and classes...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/Call_SNT.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/Options.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/Sholl_Analysis.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/Sholl_Utils.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/EnhancedGenericDialog.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/EnhancedResultsTable.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/EnhancedWaitForUserDialog.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/Utils.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/overview-frame.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/package-frame.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/package-summary.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/package-tree.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/package-frame.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/package-summary.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/sholl/gui/package-tree.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/constant-values.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/serialized-form.html...
Building index for all the packages and classes...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/overview-tree.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/index-all.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/deprecated-list.html...
Building index for all classes...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/allclasses-frame.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/allclasses-noframe.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/index.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/overview-summary.html...
Generating /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/apidocs/help-doc.html...
3 warnings
[WARNING] Javadoc Warnings
[WARNING] /data/devel/jenkins-maven/workspace/Sholl-Analysis/src/main/java/sholl/Sholl_Analysis.java:1808: warning - #BIN_AVERAGE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins-maven/workspace/Sholl-Analysis/src/main/java/sholl/Sholl_Analysis.java:1808: warning - #BIN_MEDIAN (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins-maven/workspace/Sholl-Analysis/src/main/java/sholl/Sholl_Analysis.java:1808: warning - #BIN_MODE (referenced by @value tag) is an unknown reference.
[INFO] Building jar: /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT-javadoc.jar
[INFO] 
[INFO] --- maven-jar-plugin:2.6:test-jar (default) @ Sholl_Analysis ---
[INFO] Skipping packaging of the test-jar
[INFO] 
[INFO] --- maven-install-plugin:2.5.2:install (default-install) @ Sholl_Analysis ---
[INFO] Installing /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT.jar to /var/lib/jenkins-maven/.m2/repository/ca/mcgill/Sholl_Analysis/3.6.7_SNAPSHOT/Sholl_Analysis-3.6.7_SNAPSHOT.jar
[INFO] Installing /data/devel/jenkins-maven/workspace/Sholl-Analysis/pom.xml to /var/lib/jenkins-maven/.m2/repository/ca/mcgill/Sholl_Analysis/3.6.7_SNAPSHOT/Sholl_Analysis-3.6.7_SNAPSHOT.pom
[INFO] Installing /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT-sources.jar to /var/lib/jenkins-maven/.m2/repository/ca/mcgill/Sholl_Analysis/3.6.7_SNAPSHOT/Sholl_Analysis-3.6.7_SNAPSHOT-sources.jar
[INFO] Installing /data/devel/jenkins-maven/workspace/Sholl-Analysis/target/Sholl_Analysis-3.6.7_SNAPSHOT-javadoc.jar to /var/lib/jenkins-maven/.m2/repository/ca/mcgill/Sholl_Analysis/3.6.7_SNAPSHOT/Sholl_Analysis-3.6.7_SNAPSHOT-javadoc.jar
[INFO] 
[INFO] --- imagej-maven-plugin:0.6.0:copy-jars (copy-jars) @ Sholl_Analysis ---
[INFO] Property 'imagej.app.directory' unset; Skipping copy-jars
[INFO] 
[INFO] --- maven-deploy-plugin:2.8.2:deploy (default-deploy) @ Sholl_Analysis ---
[INFO] Using alternate deployment repository imagej.releases::default::http://maven.imagej.net/content/repositories/releases
Downloading: http://maven.imagej.net/content/repositories/releases/ca/mcgill/Sholl_Analysis/3.6.7_SNAPSHOT/maven-metadata.xml

Uploading: http://maven.imagej.net/content/repositories/releases/ca/mcgill/Sholl_Analysis/3.6.7_20161011.000933-1/Sholl_Analysis-3.6.7_20161011.000933-1.jar
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Oct 10, 2016 7:09:33 PM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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Uploading: http://maven.imagej.net/content/repositories/releases/ca/mcgill/Sholl_Analysis/3.6.7_20161011.000933-1/Sholl_Analysis-3.6.7_20161011.000933-1.pom
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Oct 10, 2016 7:09:33 PM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 11.678s
[INFO] Finished at: Mon Oct 10 19:09:33 CDT 2016
[INFO] Final Memory: 36M/474M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-deploy-plugin:2.8.2:deploy (default-deploy) on project Sholl_Analysis: Failed to deploy artifacts: Could not transfer artifact ca.mcgill:Sholl_Analysis:jar:3.6.7_20161011.000933-1 from/to imagej.releases (http://maven.imagej.net/content/repositories/releases): Failed to transfer file: http://maven.imagej.net/content/repositories/releases/ca/mcgill/Sholl_Analysis/3.6.7_20161011.000933-1/Sholl_Analysis-3.6.7_20161011.000933-1.jar. Return code is: 400 -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Archiving artifacts



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