[ImageJ-builds] Build failed in Jenkins: ImageJ-OMERO #135

jenkins at imagej.net jenkins at imagej.net
Thu Nov 12 15:17:11 CST 2015


See <http://jenkins.imagej.net/job/ImageJ-OMERO/135/changes>

Changes:

[Curtis Rueden] POM: bump pom-imagej parent to 13.3.0

[Curtis Rueden] POM: remove obsolete mailing list entry

[Curtis Rueden] POM: add more precise URL

[Curtis Rueden] POM: Update developers and contributors

------------------------------------------
[...truncated 50 lines...]
[INFO] Adding ignorable dependency: jama:jama:null
[INFO]   Adding ignore: Jama/*
[INFO] Adding ignorable dependency: com.sun:tools:null
[INFO]   Adding ignore: *
[INFO] 
[INFO] --- build-helper-maven-plugin:1.9.1:regex-property (sanitize-version) @ imagej-omero ---
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ imagej-omero ---
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins-maven/workspace/ImageJ-OMERO && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins-maven/workspace/ImageJ-OMERO
[INFO] Storing buildNumber: 44f895dcc54478c3abc73b3883943c2a9a238ba4 at timestamp: 1447363024849
[WARNING] Cannot get the branch information from the git repository: 
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref

[INFO] Executing: /bin/sh -c cd /data/devel/jenkins-maven/workspace/ImageJ-OMERO && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins-maven/workspace/ImageJ-OMERO
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ imagej-omero ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins-maven/workspace/ImageJ-OMERO/src/main/resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ imagej-omero ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 13 source files to /data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/classes
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ imagej-omero ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins-maven/workspace/ImageJ-OMERO/src/test/resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ imagej-omero ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 4 source files to /data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/test-classes
[INFO] 
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ imagej-omero ---
[INFO] Surefire report directory: /data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/surefire-reports

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running net.imagej.omero.OMEROFormatTest
[ECLIPSE HELPER] Indexing annotations...
[INFO] Overriding Open; identifier: command:net.imagej.omero.ScriptGeneratorTest$FileOpen; jar: file:/data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/test-classes/
[INFO] Overriding Save; identifier: command:net.imagej.omero.ScriptGeneratorTest$FileSave; jar: file:/data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/test-classes/
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.162 sec - in net.imagej.omero.OMEROFormatTest
Running net.imagej.omero.OMEROServiceTest
[WARNING] Invalid service: net.imagej.omero.DefaultOMEROService
[WARNING] Invalid service: net.imagej.omero.DefaultOMEROService
Tests run: 2, Failures: 0, Errors: 2, Skipped: 0, Time elapsed: 0.196 sec <<< FAILURE! - in net.imagej.omero.OMEROServiceTest
testGetJobParam(net.imagej.omero.OMEROServiceTest)  Time elapsed: 0.13 sec  <<< ERROR!
java.lang.IllegalArgumentException: Invalid service: net.imagej.omero.DefaultOMEROService
	at net.imagej.legacy.LegacyService.checkInstance(LegacyService.java:658)
	at net.imagej.legacy.LegacyService.initialize(LegacyService.java:458)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:353)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:340)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:194)
	at org.scijava.service.ServiceHelper.loadServices(ServiceHelper.java:170)
	at org.scijava.Context.<init>(Context.java:267)
	at org.scijava.Context.<init>(Context.java:224)
	at org.scijava.Context.<init>(Context.java:163)
	at org.scijava.Context.<init>(Context.java:149)
	at net.imagej.omero.OMEROServiceTest.createService(OMEROServiceTest.java:208)
	at net.imagej.omero.OMEROServiceTest.testGetJobParam(OMEROServiceTest.java:74)
Caused by: java.lang.Throwable: Initialized here:
	at net.imagej.legacy.LegacyService.initialize(LegacyService.java:476)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:353)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:340)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:194)
	at org.scijava.service.ServiceHelper.loadServices(ServiceHelper.java:166)
	at org.scijava.Context.<init>(Context.java:267)
	at org.scijava.Context.<init>(Context.java:224)
	at org.scijava.Context.<init>(Context.java:163)
	at org.scijava.Context.<init>(Context.java:149)
	at io.scif.SCIFIO.<init>(SCIFIO.java:85)
	at net.imagej.omero.OMEROFormatTest.<clinit>(OMEROFormatTest.java:48)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.junit.runners.BlockJUnit4ClassRunner.createTest(BlockJUnit4ClassRunner.java:195)
	at org.junit.runners.BlockJUnit4ClassRunner$1.runReflectiveCall(BlockJUnit4ClassRunner.java:244)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.BlockJUnit4ClassRunner.methodBlock(BlockJUnit4ClassRunner.java:241)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
	at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
	at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
	at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:264)
	at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
	at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:124)
	at org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:200)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:153)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)

testPrototype(net.imagej.omero.OMEROServiceTest)  Time elapsed: 0.066 sec  <<< ERROR!
java.lang.IllegalArgumentException: Invalid service: net.imagej.omero.DefaultOMEROService
	at net.imagej.legacy.LegacyService.checkInstance(LegacyService.java:658)
	at net.imagej.legacy.LegacyService.initialize(LegacyService.java:458)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:353)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:340)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:194)
	at org.scijava.service.ServiceHelper.loadServices(ServiceHelper.java:170)
	at org.scijava.Context.<init>(Context.java:267)
	at org.scijava.Context.<init>(Context.java:224)
	at org.scijava.Context.<init>(Context.java:163)
	at org.scijava.Context.<init>(Context.java:149)
	at net.imagej.omero.OMEROServiceTest.createService(OMEROServiceTest.java:208)
	at net.imagej.omero.OMEROServiceTest.testPrototype(OMEROServiceTest.java:141)
Caused by: java.lang.Throwable: Initialized here:
	at net.imagej.legacy.LegacyService.initialize(LegacyService.java:476)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:353)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:340)
	at org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
	at org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:194)
	at org.scijava.service.ServiceHelper.loadServices(ServiceHelper.java:166)
	at org.scijava.Context.<init>(Context.java:267)
	at org.scijava.Context.<init>(Context.java:224)
	at org.scijava.Context.<init>(Context.java:163)
	at org.scijava.Context.<init>(Context.java:149)
	at io.scif.SCIFIO.<init>(SCIFIO.java:85)
	at net.imagej.omero.OMEROFormatTest.<clinit>(OMEROFormatTest.java:48)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.junit.runners.BlockJUnit4ClassRunner.createTest(BlockJUnit4ClassRunner.java:195)
	at org.junit.runners.BlockJUnit4ClassRunner$1.runReflectiveCall(BlockJUnit4ClassRunner.java:244)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.BlockJUnit4ClassRunner.methodBlock(BlockJUnit4ClassRunner.java:241)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
	at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
	at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
	at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:264)
	at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
	at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:124)
	at org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:200)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:153)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)

Running net.imagej.omero.ScriptGeneratorTest
[ERROR] Cannot create plugin: class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', priority=0.0, enabled=true, pluginType=App
java.lang.IllegalArgumentException: Required service is missing: net.imagej.legacy.LegacyService
Context: org.scijava.Context at 1036e92b
ClassLoader: sun.misc.Launcher$AppClassLoader at 1127a1d8

-- Services known to context --
org.scijava.event.DefaultEventService [priority = 100000.0]
org.scijava.app.DefaultAppService [priority = 0.0]
org.scijava.command.DefaultCommandService [priority = 0.0]
org.scijava.convert.DefaultConvertService [priority = 0.0]
org.scijava.menu.DefaultMenuService [priority = 0.0]
org.scijava.module.DefaultModuleService [priority = 0.0]
org.scijava.object.DefaultObjectService [priority = 0.0]
org.scijava.plugin.DefaultPluginService [priority = 0.0]
org.scijava.prefs.DefaultPrefService [priority = 0.0]
org.scijava.thread.DefaultThreadService [priority = 0.0]
org.scijava.log.StderrLogService [priority = -100.0]

-- Classpath of ClassLoader --
/data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/surefire/surefirebooter7296024454060981961.jar

	at org.scijava.Context.inject(Context.java:440)
	at org.scijava.Context.inject(Context.java:372)
	at org.scijava.plugin.DefaultPluginService.createInstance(DefaultPluginService.java:237)
	at org.scijava.plugin.DefaultPluginService.createInstances(DefaultPluginService.java:225)
	at org.scijava.plugin.DefaultPluginService.createInstancesOfType(DefaultPluginService.java:216)
	at org.scijava.plugin.AbstractSingletonService.initInstances(AbstractSingletonService.java:123)
	at org.scijava.plugin.AbstractSingletonService.getInstances(AbstractSingletonService.java:72)
	at org.scijava.app.DefaultAppService.getApp(DefaultAppService.java:71)
	at net.imagej.omero.ScriptGenerator.generateAll(ScriptGenerator.java:117)
	at net.imagej.omero.ScriptGeneratorTest.testGenerateAll(ScriptGeneratorTest.java:85)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:606)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:47)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:44)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:271)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
	at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
	at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
	at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:264)
	at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
	at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:124)
	at org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:200)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:153)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.066 sec - in net.imagej.omero.ScriptGeneratorTest

Results :

Tests in error: 
  OMEROServiceTest.testGetJobParam:74->createService:208 » IllegalArgument Inval...
  OMEROServiceTest.testPrototype:141->createService:208 » IllegalArgument Invali...

Tests run: 6, Failures: 0, Errors: 2, Skipped: 0

[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 12.200s
[INFO] Finished at: Thu Nov 12 15:17:11 CST 2015
[INFO] Final Memory: 30M/548M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.17:test (default-test) on project imagej-omero: There are test failures.
[ERROR] 
[ERROR] Please refer to /data/devel/jenkins-maven/workspace/ImageJ-OMERO/target/surefire-reports for the individual test results.
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Invoke top-level Maven targets' marked build as failure
Archiving artifacts
Build step 'Groovy Postbuild' marked build as failure
Recording test results



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