[ImageJ-builds] Build failed in Jenkins: Bio-Formats-Fiji #632

[jenkins at imagej.net]

See <http://jenkins.imagej.net/job/Bio-Formats-Fiji/632/>

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Started by timer
Building on master in workspace <http://jenkins.imagej.net/job/Bio-Formats-Fiji/ws/>
Copied 2 artifacts from "Fiji-minimal" build number 2006
[workspace] $ /bin/sh -xe /tmp/hudson2653998283377143421.sh
+ sh bin/upload-bf.sh
No GUI detected.  Falling back to headless mode.
No GUI detected.  Falling back to headless mode.
Updating the index of available files (Updating from ImageJ site: http://up...
Updating from ImageJ site: http://update.imagej.net/ done
Updating from Fiji site: http://fiji.sc/update/ done
Updating from Bio-Formats site: http://sites.imagej.net/Bio-Formats/ done
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Done: Checksummer

[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/scijava-common-2.43.0.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/imagej-2.0.0-rc-30.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/imagej-legacy-0.16.0.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/imagej-ops-0.14.0.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/imglib2-roi-0.3.1.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/batik.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/jna.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/imglib2-algorithm-gpl-0.1.3.jar
[INFO] Deleting obsolete version /data/devel/jenkins/jobs/Bio-Formats-Fiji/workspace/Fiji.app/jars/bigdataviewer-core-1.2.0.jar
Downloading... (jars/scijava-common-2.44.0.jar) 
jars/scijava-common-2.44.0.jar done
jars/scijava-common-2.44.0.jar done
jars/imagej-2.0.0-rc-31.jar done
jars/imagej-2.0.0-rc-31.jar done
jars/imagej-legacy-0.17.0.jar done
jars/imagej-legacy-0.17.0.jar done
jars/imagej-ops-0.15.0.jar done
jars/imagej-ops-0.15.0.jar done
jars/imglib2-roi-0.3.2.jar done
jars/imglib2-roi-0.3.2.jar done
jars/imglib2-algorithm-gpl-0.1.5.jar done
jars/imglib2-algorithm-gpl-0.1.5.jar done
jars/bigdataviewer-core-1.2.1.jar done
jars/bigdataviewer-core-1.2.1.jar done
Done: Downloading...

Done: Downloading...


--== jars/bio-formats/formats-api ==--

2015-07-02 20:27:09 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//formats-api.jar [143609/143609] -> "formats-api.jar" [1]

--== jars/bio-formats/formats-bsd ==--

2015-07-02 20:27:12 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//formats-bsd.jar [681648/681648] -> "formats-bsd.jar" [1]

--== jars/bio-formats/formats-common ==--

2015-07-02 20:27:13 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//formats-common.jar [114984/114984] -> "formats-common.jar" [1]

--== jars/bio-formats/formats-gpl ==--

2015-07-02 20:27:16 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//formats-gpl.jar [1210944/1210944] -> "formats-gpl.jar" [1]

--== jars/bio-formats/jai_imageio ==--

2015-07-02 20:27:18 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//jai_imageio.jar [1030174/1030174] -> "jai_imageio.jar" [1]

--== jars/bio-formats/mdbtools-java ==--

2015-07-02 20:27:20 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//mdbtools-java.jar [86537/86537] -> "mdbtools-java.jar" [1]

--== jars/bio-formats/metakit ==--

2015-07-02 20:27:21 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//metakit.jar [9335/9335] -> "metakit.jar" [1]

--== jars/bio-formats/ome-poi ==--

2015-07-02 20:27:24 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//ome-poi.jar [932618/932618] -> "ome-poi.jar" [1]

--== jars/bio-formats/ome-xml ==--

2015-07-02 20:27:26 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//ome-xml.jar [604566/604566] -> "ome-xml.jar" [1]

--== jars/bio-formats/specification ==--

2015-07-02 20:27:29 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//specification.jar [602688/602688] -> "specification.jar" [1]

--== jars/bio-formats/turbojpeg ==--

2015-07-02 20:27:32 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//turbojpeg.jar [1294470/1294470] -> "turbojpeg.jar" [1]

--== plugins/bio-formats_plugins ==--

2015-07-02 20:27:34 URL:https://ci.openmicroscopy.org/job/BIOFORMATS-5.1-latest/lastSuccessfulBuild/artifact/artifacts//bio-formats_plugins.jar [241185/241185] -> "bio-formats_plugins.jar" [1]
No GUI detected.  Falling back to headless mode.
No GUI detected.  Falling back to headless mode.
Updating the index of available files (Updating from ImageJ site: http://up...
Updating from ImageJ site: http://update.imagej.net/ done
Updating from Fiji site: http://fiji.sc/update/ done
Updating from Bio-Formats site: http://sites.imagej.net/Bio-Formats/ done
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Done: Checksummer

No GUI detected.  Falling back to headless mode.
No GUI detected.  Falling back to headless mode.
Updating the index of available files (Updating from ImageJ site: http://up...
Updating from ImageJ site: http://update.imagej.net/ done
Updating from Fiji site: http://fiji.sc/update/ done
Updating from Bio-Formats site: http://sites.imagej.net/Bio-Formats/ done
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Done: Checksummer

[INFO] Uploading 0 (removing 2) to Bio-Formats (webdav:Bio-Formats:<password>:./)
[ERROR] There are conflicts:
jars/netcdf-4.3.19.jar: Depends on jars/jna.jar which is about to be removed.
plugins/CPU_Meter-2.0.0.jar: Depends on jars/jna.jar which is about to be removed.
plugins/IO_-2.2.1.jar: Depends on jars/batik.jar which is about to be removed.
plugins/Simple_Neurite_Tracer-2.0.4.jar: Depends on jars/batik.jar which is about to be removed.
plugins/SPIM_Registration-2.3.9.jar: Depends on jars/jna.jar which is about to be removed.
plugins/TrackMate_-2.7.4.jar: Depends on jars/batik.jar which is about to be removed.

No GUI detected.  Falling back to headless mode.
No GUI detected.  Falling back to headless mode.
Updating the index of available files (Updating from ImageJ site: http://up...
Updating from ImageJ site: http://update.imagej.net/ done
Updating from Fiji site: http://fiji.sc/update/ done
Updating from Bio-Formats site: http://sites.imagej.net/Bio-Formats/ done
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Done: Checksummer

Build step 'Groovy Postbuild' changed build result to FAILURE
Build step 'Groovy Postbuild' marked build as failure