[ImageJ-builds] Build failed in Jenkins: H5J_Loader #1

jenkins at imagej.net jenkins at imagej.net
Thu Jul 2 13:22:53 CDT 2015


See <http://jenkins.imagej.net/job/H5J_Loader/1/>

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Downloaded: http://maven.imagej.net/content/groups/public/org/bytedeco/javacpp-presets/ffmpeg/2.6.1-0.11/ffmpeg-2.6.1-0.11-linux-x86_64.jar (8918 KB at 3786.5 KB/sec)
[INFO] 
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ H5J_Loader_Plugin ---
Downloading: http://maven.imagej.net/content/groups/public/com/sun/tools/1.4.2/tools-1.4.2.pom
               
Downloading: http://repo.maven.apache.org/maven2/com/sun/tools/1.4.2/tools-1.4.2.pom
               
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO]   Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO]   Adding ignore: com/kenai/constantine/*
[INFO]   Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO]   Adding ignore: jnr/ffi/*
[INFO] Adding ignorable dependency: null:VIB-lib:null
[INFO]   Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:j3d-core:null
[INFO]   Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:joda-time:null
[INFO]   Adding ignore: *
[INFO] Adding ignorable dependency: null:slf4j-log4j12:null
[INFO]   Adding ignore: org/slf4j/impl/*
[INFO] Adding ignorable dependency: batik:batik:null
[INFO]   Adding ignore: *
[INFO] Adding ignorable dependency: jama:jama:null
[INFO]   Adding ignore: Jama/*
[INFO] Adding ignorable dependency: com.sun:tools:null
[INFO]   Adding ignore: *
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ H5J_Loader_Plugin ---
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/H5J_Loader/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/H5J_Loader/workspace
[INFO] Storing buildNumber: 0b5f1548c5bab31ce5a1457a82f48c2079dd3571 at timestamp: 1435861370773
[WARNING] Cannot get the branch information from the git repository: 
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref

[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/H5J_Loader/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/H5J_Loader/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] 
[INFO] --- scijava-maven-plugin:0.5.0:set-rootdir (set-rootdir) @ H5J_Loader_Plugin ---
[INFO] Setting rootdir: /data/devel/jenkins/jobs/H5J_Loader/workspace
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ H5J_Loader_Plugin ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ H5J_Loader_Plugin ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 9 source files to /data/devel/jenkins/jobs/H5J_Loader/workspace/target/classes
[WARNING] Note: /data/devel/jenkins/jobs/H5J_Loader/workspace/src/main/java/org/janelia/it/jacs/shared/ffmpeg/FFMpegLoader.java uses or overrides a deprecated API.
[WARNING] Note: Recompile with -Xlint:deprecation for details.
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ H5J_Loader_Plugin ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ H5J_Loader_Plugin ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 1 source file to /data/devel/jenkins/jobs/H5J_Loader/workspace/target/test-classes
[INFO] 
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ H5J_Loader_Plugin ---
[INFO] Surefire report directory: /data/devel/jenkins/jobs/H5J_Loader/workspace/target/surefire-reports

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running org.janelia.it.h5j.fiji.adapter.FijiAdapterTest
Tests run: 1, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.259 sec <<< FAILURE! - in org.janelia.it.h5j.fiji.adapter.FijiAdapterTest
getImagePlus(org.janelia.it.h5j.fiji.adapter.FijiAdapterTest)  Time elapsed: 0.224 sec  <<< ERROR!
java.lang.UnsatisfiedLinkError: no jniavutil in java.library.path
	at java.lang.ClassLoader$NativeLibrary.load(Native Method)
	at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1807)
	at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1703)
	at java.lang.Runtime.load0(Runtime.java:770)
	at java.lang.System.load(System.java:1003)
	at org.bytedeco.javacpp.Loader.loadLibrary(Loader.java:525)
	at org.bytedeco.javacpp.Loader.load(Loader.java:411)
	at org.bytedeco.javacpp.Loader.load(Loader.java:354)
	at org.bytedeco.javacpp.avutil.<clinit>(avutil.java:10)
	at java.lang.Class.forName0(Native Method)
	at java.lang.Class.forName(Class.java:249)
	at org.bytedeco.javacpp.Loader.load(Loader.java:386)
	at org.bytedeco.javacpp.Loader.load(Loader.java:354)
	at org.bytedeco.javacpp.avcodec.<clinit>(avcodec.java:13)
	at org.janelia.it.jacs.shared.ffmpeg.FFMpegLoader.<clinit>(FFMpegLoader.java:50)
	at org.janelia.it.jacs.shared.ffmpeg.H5JLoader.extract(H5JLoader.java:67)
	at org.janelia.it.jacs.shared.ffmpeg.H5JLoader.extractAllChannels(H5JLoader.java:51)
	at org.janelia.it.h5j.fiji.adapter.FijiAdapter.getImagePlus(FijiAdapter.java:30)
	at org.janelia.it.h5j.fiji.adapter.FijiAdapterTest.getImagePlus(FijiAdapterTest.java:62)


Results :

Tests in error: 
  FijiAdapterTest.getImagePlus:62 » UnsatisfiedLink no jniavutil in java.library...

Tests run: 1, Failures: 0, Errors: 1, Skipped: 0

[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 8.451s
[INFO] Finished at: Thu Jul 02 13:22:52 CDT 2015
[INFO] Final Memory: 19M/360M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.17:test (default-test) on project H5J_Loader_Plugin: There are test failures.
[ERROR] 
[ERROR] Please refer to /data/devel/jenkins/jobs/H5J_Loader/workspace/target/surefire-reports for the individual test results.
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Execute shell' marked build as failure
Archiving artifacts



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