[ImageJ-builds] Build failed in Jenkins: Descriptor_based_registration #29
jenkins at imagej.net
jenkins at imagej.net
Thu Jan 29 11:23:35 CST 2015
See <http://jenkins.imagej.net/job/Descriptor_based_registration/29/changes>
Changes:
[Stephan Preibisch] Revert "Merge branch 'GaussianLocalization'"
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Downloading: http://repo.maven.apache.org/maven2/com/github/jnr/jnr-x86asm/maven-metadata.xml
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[INFO]
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ Descriptor_based_registration ---
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from central
Downloading: http://maven.imagej.net/content/groups/public/com/sun/tools/1.4.2/tools-1.4.2.pom
Downloading: http://repo.maven.apache.org/maven2/com/sun/tools/1.4.2/tools-1.4.2.pom
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from central
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO] Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO] Adding ignore: com/kenai/constantine/*
[INFO] Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO] Adding ignore: jnr/ffi/*
[INFO] Adding ignorable dependency: null:VIB-lib:null
[INFO] Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:j3d-core:null
[INFO] Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:joda-time:null
[INFO] Adding ignore: *
[INFO] Adding ignorable dependency: null:slf4j-log4j12:null
[INFO] Adding ignore: org/slf4j/impl/*
[INFO] Adding ignorable dependency: batik:batik:null
[INFO] Adding ignore: *
[INFO] Adding ignorable dependency: jama:jama:null
[INFO] Adding ignore: Jama/*
[INFO] Adding ignorable dependency: com.sun:tools:null
[INFO] Adding ignore: *
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jffi: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jffi: checking for updates from central
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from imagej.public
[INFO] artifact com.github.jnr:jnr-x86asm: checking for updates from central
[INFO]
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ Descriptor_based_registration ---
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/Descriptor_based_registration/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/Descriptor_based_registration/workspace
[INFO] Storing buildNumber: 4c2298a475baf4b817771d52229d128b3004036e at timestamp: 1422552206513
[WARNING] Cannot get the branch information from the git repository:
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/Descriptor_based_registration/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/Descriptor_based_registration/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO]
[INFO] --- scijava-maven-plugin:0.4.3:set-rootdir (set-rootdir) @ Descriptor_based_registration ---
[INFO] Setting rootdir: /data/devel/jenkins/jobs/Descriptor_based_registration/workspace
[INFO]
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ Descriptor_based_registration ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO]
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ Descriptor_based_registration ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 16 source files to /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/classes
[WARNING] Note: Some input files use unchecked or unsafe operations.
[WARNING] Note: Recompile with -Xlint:unchecked for details.
[INFO]
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ Descriptor_based_registration ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/src/test/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ Descriptor_based_registration ---
[INFO] No sources to compile
[INFO]
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ Descriptor_based_registration ---
[INFO] No tests to run.
[INFO]
[INFO] --- maven-jar-plugin:2.5:jar (default-jar) @ Descriptor_based_registration ---
[INFO] Building jar: /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/Descriptor_based_registration-2.0.5.jar
[INFO]
[INFO] --- maven-source-plugin:2.3:jar-no-fork (default) @ Descriptor_based_registration ---
[INFO] Building jar: /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/Descriptor_based_registration-2.0.5-sources.jar
[INFO]
[INFO] --- maven-source-plugin:2.3:jar-no-fork (attach-sources) @ Descriptor_based_registration ---
[WARNING] Artifact sc.fiji:Descriptor_based_registration:java-source:sources:2.0.5 already attached to project, ignoring duplicate
[INFO]
[INFO] --- maven-javadoc-plugin:2.9.1:jar (attach-javadocs) @ Descriptor_based_registration ---
[INFO]
Loading source files for package selection...
Loading source files for package plugin...
Loading source files for package process...
Constructing Javadoc information...
Standard Doclet version 1.6.0_45
Building tree for all the packages and classes...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//DoneButtonListener.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//ExtendedPointMatch.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//ListListener.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//LoadListener.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//Match.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//RemoveItemListener.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//SaveListener.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//Select_Points.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//Descriptor_based_registration.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//Descriptor_based_series_registration.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//DescriptorParameters.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//Manual_Landmark_Selection.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//ComparePair.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//Matching.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//OverlayFusion.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//Particle.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/overview-frame.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//package-frame.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//package-summary.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/plugin//package-tree.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//package-frame.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//package-summary.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/process//package-tree.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//package-frame.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//package-summary.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/selection//package-tree.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/constant-values.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/serialized-form.html...
Building index for all the packages and classes...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/overview-tree.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/index-all.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/deprecated-list.html...
Building index for all classes...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/allclasses-frame.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/allclasses-noframe.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/index.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/overview-summary.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/help-doc.html...
Generating /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/apidocs/stylesheet.css...
2 warnings
[WARNING] Javadoc Warnings
[WARNING] javadoc: warning - Error fetching URL: http://jenkins.imagej.net/view/Fiji/job/Saalfeld-MPICBG-Maven/javadoc/package-list
[WARNING] /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/src/main/java/plugin/Descriptor_based_registration.java:802: warning - @param argument "text" is not a parameter name.
[INFO] Fixed Javadoc frame injection vulnerability (CVE-2013-1571) in 1 files.
[INFO] Building jar: /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/Descriptor_based_registration-2.0.5-javadoc.jar
[INFO]
[INFO] --- maven-jar-plugin:2.5:test-jar (default) @ Descriptor_based_registration ---
[INFO] Skipping packaging of the test-jar
[INFO]
[INFO] --- maven-install-plugin:2.5.1:install (default-install) @ Descriptor_based_registration ---
[INFO] Installing /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/Descriptor_based_registration-2.0.5.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5.jar
[INFO] Installing /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/pom.xml to /var/lib/jenkins/.m2/repository/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5.pom
[INFO] Installing /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/Descriptor_based_registration-2.0.5-sources.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5-sources.jar
[INFO] Installing /data/devel/jenkins/jobs/Descriptor_based_registration/workspace/target/Descriptor_based_registration-2.0.5-javadoc.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5-javadoc.jar
[INFO]
[INFO] --- imagej-maven-plugin:0.5.4:copy-jars (copy-jars) @ Descriptor_based_registration ---
[INFO] Property 'imagej.app.directory' unset; Skipping copy-jars
[INFO]
[INFO] --- maven-deploy-plugin:2.8.1:deploy (default-deploy) @ Descriptor_based_registration ---
Uploading: dav:http://maven.imagej.net/content/repositories/releases/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5.jar
Jan 29, 2015 11:23:34 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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Jan 29, 2015 11:23:34 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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Uploading: http://maven.imagej.net/content/repositories/releases/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5.pom
Jan 29, 2015 11:23:34 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
3/3 KB
Jan 29, 2015 11:23:34 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
5/3 KB
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 50.745s
[INFO] Finished at: Thu Jan 29 11:23:35 CST 2015
[INFO] Final Memory: 36M/571M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-deploy-plugin:2.8.1:deploy (default-deploy) on project Descriptor_based_registration: Failed to deploy artifacts: Could not transfer artifact sc.fiji:Descriptor_based_registration:jar:2.0.5 from/to imagej.releases (dav:http://maven.imagej.net/content/repositories/releases): Failed to transfer file: http://maven.imagej.net/content/repositories/releases/sc/fiji/Descriptor_based_registration/2.0.5/Descriptor_based_registration-2.0.5.jar. Return code is: 400 -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Archiving artifacts
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