[ImageJ-builds] Build failed in Jenkins: SPIM_Registration #184
jenkins at imagej.net
jenkins at imagej.net
Thu Apr 16 09:23:39 CDT 2015
See <http://jenkins.imagej.net/job/SPIM_Registration/184/changes>
Changes:
[Stephan Preibisch] use monolithic HDF5 imgloader if possible
[Stephan Preibisch] adjust detection color when displaying in BDV
[Stephan Preibisch] added code for using downsampled version of images directly, coordinates are not yet corrected
------------------------------------------
Started by an SCM change
Building on master in workspace <http://jenkins.imagej.net/job/SPIM_Registration/ws/>
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/bigdataviewer/SPIM_Registration # timeout=10
Fetching upstream changes from https://github.com/bigdataviewer/SPIM_Registration
> git --version # timeout=10
> git -c core.askpass=true fetch --tags --progress https://github.com/bigdataviewer/SPIM_Registration +refs/heads/*:refs/remotes/origin/*
> git rev-parse origin/master^{commit} # timeout=10
Checking out Revision d7bd3ac5cbc96b565ecd6f20e1e5e78b05fb950e (origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f d7bd3ac5cbc96b565ecd6f20e1e5e78b05fb950e
> git rev-list 3b81125dde75aa6df7af8ef78855f7caa6ddf044 # timeout=10
> git tag -a -f -m Jenkins Build #184 jenkins-SPIM_Registration-184 # timeout=10
[workspace] $ /bin/sh -xe /tmp/hudson3961040081215094817.sh
+ git clean -dfx
Removing target/
[workspace] $ /bin/sh -xe /tmp/hudson73799533838753450.sh
+ mvn -U -Pdeploy-to-imagej deploy
[INFO] Scanning for projects...
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building SPIM Registration 2.1.11-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ SPIM_Registration ---
Downloading: http://maven.imagej.net/content/groups/public/com/sun/tools/1.4.2/tools-1.4.2.pom
Downloading: http://repo.maven.apache.org/maven2/com/sun/tools/1.4.2/tools-1.4.2.pom
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO] Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO] Adding ignore: com/kenai/constantine/*
[INFO] Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO] Adding ignore: jnr/ffi/*
[INFO] Adding ignorable dependency: null:VIB-lib:null
[INFO] Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:j3d-core:null
[INFO] Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:joda-time:null
[INFO] Adding ignore: *
[INFO] Adding ignorable dependency: null:slf4j-log4j12:null
[INFO] Adding ignore: org/slf4j/impl/*
[INFO] Adding ignorable dependency: batik:batik:null
[INFO] Adding ignore: *
[INFO] Adding ignorable dependency: jama:jama:null
[INFO] Adding ignore: Jama/*
[INFO] Adding ignorable dependency: com.sun:tools:null
[INFO] Adding ignore: *
[INFO]
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ SPIM_Registration ---
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/SPIM_Registration/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/SPIM_Registration/workspace
[INFO] Storing buildNumber: d7bd3ac5cbc96b565ecd6f20e1e5e78b05fb950e at timestamp: 1429194211780
[WARNING] Cannot get the branch information from the git repository:
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/SPIM_Registration/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/SPIM_Registration/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO]
[INFO] --- scijava-maven-plugin:0.5.0:set-rootdir (set-rootdir) @ SPIM_Registration ---
[INFO] Setting rootdir: /data/devel/jenkins/jobs/SPIM_Registration/workspace
[INFO]
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ SPIM_Registration ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ SPIM_Registration ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 330 source files to /data/devel/jenkins/jobs/SPIM_Registration/workspace/target/classes
[INFO] -------------------------------------------------------------
[WARNING] COMPILATION WARNING :
[INFO] -------------------------------------------------------------
[WARNING] Note: Some input files use or override a deprecated API.
[WARNING] Note: Recompile with -Xlint:deprecation for details.
[WARNING] Note: Some input files use unchecked or unsafe operations.
[WARNING] Note: Recompile with -Xlint:unchecked for details.
[INFO] 4 warnings
[INFO] -------------------------------------------------------------
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR :
[INFO] -------------------------------------------------------------
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[10,20] cannot find symbol
symbol : class MultiResolutionImgLoader
location: package bdv.img.hdf5
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[10,20] cannot find symbol
symbol : class MultiResolutionImgLoader
location: package bdv.img.hdf5
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[383,22] cannot find symbol
symbol : class MultiResolutionImgLoader
location: class spim.fiji.plugin.interestpointdetection.DifferenceOf
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[385,25] cannot find symbol
symbol : class MultiResolutionImgLoader
location: class spim.fiji.plugin.interestpointdetection.DifferenceOf
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[385,71] cannot find symbol
symbol : class MultiResolutionImgLoader
location: class spim.fiji.plugin.interestpointdetection.DifferenceOf
[INFO] 5 errors
[INFO] -------------------------------------------------------------
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 24.085s
[INFO] Finished at: Thu Apr 16 09:23:39 CDT 2015
[INFO] Final Memory: 31M/418M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.1:compile (default-compile) on project SPIM_Registration: Compilation failure: Compilation failure:
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[10,20] cannot find symbol
[ERROR] symbol : class MultiResolutionImgLoader
[ERROR] location: package bdv.img.hdf5
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[10,20] cannot find symbol
[ERROR] symbol : class MultiResolutionImgLoader
[ERROR] location: package bdv.img.hdf5
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[383,22] cannot find symbol
[ERROR] symbol : class MultiResolutionImgLoader
[ERROR] location: class spim.fiji.plugin.interestpointdetection.DifferenceOf
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[385,25] cannot find symbol
[ERROR] symbol : class MultiResolutionImgLoader
[ERROR] location: class spim.fiji.plugin.interestpointdetection.DifferenceOf
[ERROR] /data/devel/jenkins/jobs/SPIM_Registration/workspace/src/main/java/spim/fiji/plugin/interestpointdetection/DifferenceOf.java:[385,71] cannot find symbol
[ERROR] symbol : class MultiResolutionImgLoader
[ERROR] location: class spim.fiji.plugin.interestpointdetection.DifferenceOf
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Execute shell' marked build as failure
Archiving artifacts
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