[ImageJ-builds] Build failed in Jenkins: SCIFIO-OMERO #56
jenkins at imagej.net
jenkins at imagej.net
Wed Apr 15 14:52:35 CDT 2015
See <http://jenkins.imagej.net/job/SCIFIO-OMERO/56/changes>
Changes:
[Jenkins] Bump to next development cycle
------------------------------------------
Started by an SCM change
Started by an SCM change
Building on master in workspace <http://jenkins.imagej.net/job/SCIFIO-OMERO/ws/>
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url git://github.com/scifio/scifio-omero # timeout=10
Fetching upstream changes from git://github.com/scifio/scifio-omero
> git --version # timeout=10
> git -c core.askpass=true fetch --tags --progress git://github.com/scifio/scifio-omero +refs/heads/master:refs/remotes/origin/master
> git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 44876a27312a05ac0a01a07f3bdcbc2eafd4357e (origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 44876a27312a05ac0a01a07f3bdcbc2eafd4357e
> git rev-list c02f34751e428ae01f6f4071fc489a1427b5301c # timeout=10
> git tag -a -f -m Jenkins Build #56 jenkins-SCIFIO-OMERO-56 # timeout=10
[workspace] $ /bin/sh -xe /tmp/hudson1457015792137691663.sh
+ git clean -dfx
Removing target/
[workspace] $ mvn -U -Pdeploy-to-imagej deploy
[INFO] Scanning for projects...
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building SCIFIO Format for OMERO 0.8.1-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ scifio-omero ---
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO] Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO] Adding ignore: com/kenai/constantine/*
[INFO] Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO] Adding ignore: jnr/ffi/*
[INFO] Adding ignorable dependency: null:VIB-lib:null
[INFO] Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:j3d-core:null
[INFO] Adding ignore: javax/media/j3d/
[INFO] Adding ignorable dependency: null:joda-time:null
[INFO] Adding ignore: *
[INFO] Adding ignorable dependency: null:slf4j-log4j12:null
[INFO] Adding ignore: org/slf4j/impl/*
[INFO] Adding ignorable dependency: batik:batik:null
[INFO] Adding ignore: *
[INFO] Adding ignorable dependency: jama:jama:null
[INFO] Adding ignore: Jama/*
[INFO] Adding ignorable dependency: com.sun:tools:null
[INFO] Adding ignore: *
[INFO]
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ scifio-omero ---
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace
[INFO] Storing buildNumber: 44876a27312a05ac0a01a07f3bdcbc2eafd4357e at timestamp: 1429127551308
[WARNING] Cannot get the branch information from the git repository:
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO]
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ scifio-omero ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/src/main/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ scifio-omero ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 3 source files to /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/target/classes
[INFO]
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ scifio-omero ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/src/test/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ scifio-omero ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 1 source file to /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/target/test-classes
[INFO]
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ scifio-omero ---
[INFO] Surefire report directory: /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/target/surefire-reports
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Running io.scif.omero.OMEROFormatTest
[ECLIPSE HELPER] Indexing annotations...
[ERROR] Cannot create plugin: class='io.scif.omero.OMEROFormat', priority=100.0, enabled=true, pluginType=Format
java.lang.IllegalArgumentException: Required service is missing: io.scif.services.FormatService
Context: org.scijava.Context at ae0e515
ClassLoader: sun.misc.Launcher$AppClassLoader at 53004901
-- Services known to context --
org.scijava.event.DefaultEventService [priority = 100000.0]
org.scijava.script.DefaultScriptService [priority = 100.0]
io.scif.DefaultMetadataService [priority = 0.0]
io.scif.codec.DefaultCodecService [priority = 0.0]
io.scif.formats.qt.DefaultQTJavaService [priority = 0.0]
io.scif.formats.tiff.DefaultTiffService [priority = 0.0]
io.scif.gui.DefaultGUIService [priority = 0.0]
io.scif.img.DefaultImgUtilityService [priority = 0.0]
io.scif.img.cell.cache.MapDBCache [priority = 0.0]
io.scif.img.converters.DefaultPlaneConverterService [priority = 0.0]
io.scif.io.DefaultNIOService [priority = 0.0]
io.scif.refs.DefaultRefManagerService [priority = 0.0]
io.scif.services.DefaultFormatService [priority = 0.0]
org.scijava.app.DefaultAppService [priority = 0.0]
org.scijava.app.DefaultStatusService [priority = 0.0]
org.scijava.command.DefaultCommandService [priority = 0.0]
org.scijava.console.DefaultConsoleService [priority = 0.0]
org.scijava.convert.DefaultConvertService [priority = 0.0]
org.scijava.display.DefaultDisplayService [priority = 0.0]
org.scijava.input.DefaultInputService [priority = 0.0]
org.scijava.io.DefaultIOService [priority = 0.0]
org.scijava.io.DefaultRecentFileService [priority = 0.0]
org.scijava.menu.DefaultMenuService [priority = 0.0]
org.scijava.module.DefaultModuleService [priority = 0.0]
org.scijava.object.DefaultObjectService [priority = 0.0]
org.scijava.options.DefaultOptionsService [priority = 0.0]
org.scijava.platform.DefaultPlatformService [priority = 0.0]
org.scijava.plugin.DefaultPluginService [priority = 0.0]
org.scijava.prefs.DefaultPrefService [priority = 0.0]
org.scijava.text.DefaultTextService [priority = 0.0]
org.scijava.thread.DefaultThreadService [priority = 0.0]
org.scijava.tool.DefaultToolService [priority = 0.0]
org.scijava.ui.DefaultUIService [priority = 0.0]
org.scijava.ui.dnd.DefaultDragAndDropService [priority = 0.0]
org.scijava.welcome.DefaultWelcomeService [priority = 0.0]
org.scijava.widget.DefaultWidgetService [priority = 0.0]
org.scijava.log.StderrLogService [priority = -100.0]
org.scijava.platform.DefaultAppEventService [priority = -100.0]
-- Classpath of ClassLoader --
/data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/target/surefire/surefirebooter7755417363644470105.jar
at org.scijava.Context.inject(Context.java:440)
at org.scijava.Context.inject(Context.java:372)
at org.scijava.plugin.DefaultPluginService.createInstance(DefaultPluginService.java:237)
at org.scijava.plugin.DefaultPluginService.createInstances(DefaultPluginService.java:225)
at org.scijava.plugin.DefaultPluginService.createInstancesOfType(DefaultPluginService.java:216)
at io.scif.services.DefaultFormatService$2.run(DefaultFormatService.java:387)
at org.scijava.thread.DefaultThreadService$1.run(DefaultThreadService.java:164)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:439)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
at java.lang.Thread.run(Thread.java:662)
Tests run: 3, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.781 sec <<< FAILURE! - in io.scif.omero.OMEROFormatTest
testChecker(io.scif.omero.OMEROFormatTest) Time elapsed: 0.079 sec <<< ERROR!
java.lang.NullPointerException: null
at io.scif.omero.OMEROFormatTest.testChecker(OMEROFormatTest.java:56)
Results :
Tests in error:
OMEROFormatTest.testChecker:56 NullPointer
Tests run: 3, Failures: 0, Errors: 1, Skipped: 0
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 7.568s
[INFO] Finished at: Wed Apr 15 14:52:34 CDT 2015
[INFO] Final Memory: 26M/574M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.17:test (default-test) on project scifio-omero: There are test failures.
[ERROR]
[ERROR] Please refer to /data/devel/jenkins/jobs/SCIFIO-OMERO/workspace/target/surefire-reports for the individual test results.
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Invoke top-level Maven targets' marked build as failure
Archiving artifacts
Build step 'Groovy Postbuild' marked build as failure
Recording test results
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