[ImageJ-builds] Build failed in Jenkins: Fiji-daily #1259

Thu Sep 25 01:07:41 CDT 2014

See <http://jenkins.imagej.net/job/Fiji-daily/1259/>

------------------------------------------
[...truncated 126 lines...]
Removing jars/object-inspector-0.1.jar
Removing jars/options-1.1.jar
Removing jars/pal-optimization-2.0.0-SNAPSHOT.jar
Removing jars/pentaho-package-manager-1.0.0.jar
Removing jars/postgresql-8.2-507.jdbc3.jar
Removing jars/rsyntaxtextarea-2.5.2.jar
Removing jars/scala-compiler-2.10.0.jar
Removing jars/scala-library-2.10.0.jar
Removing jars/scala-reflect-2.10.0.jar
Removing jars/scifio-0.15.4.jar
Removing jars/scifio-bf-compat-1.8.2.jar
Removing jars/scifio-jai-imageio-1.1.0.jar
Removing jars/scifio-lifesci-0.5.0.jar
Removing jars/scifio-ome-xml-0.9.0.jar
Removing jars/scifio-tools-0.15.4.jar
Removing jars/scijava-common-2.27.0.jar
Removing jars/scijava-plugins-commands-0.1.5.jar
Removing jars/scijava-plugins-platforms-0.1.1.jar
Removing jars/scijava-plugins-text-markdown-0.1.1.jar
Removing jars/scijava-plugins-text-plain-0.1.1.jar
Removing jars/scijava-ui-awt-0.1.2.jar
Removing jars/scijava-ui-swing-0.2.4.jar
Removing jars/scripting-beanshell-0.1.1.jar
Removing jars/scripting-clojure-0.1.0.jar
Removing jars/scripting-java-0.2.3.jar
Removing jars/scripting-javascript-0.2.0.jar
Removing jars/scripting-jruby-0.1.1.jar
Removing jars/scripting-jython-0.1.0.jar
Removing jars/serializer-2.7.1.jar
Removing jars/slf4j-api-1.7.6.jar
Removing jars/slf4j-log4j12-1.7.2.jar
Removing jars/snakeyaml-1.13.jar
Removing jars/spim_data-1.0.0-beta-3-SNAPSHOT.jar
Removing jars/swing-checkbox-tree-1.0.0.jar
Removing jars/udunits-4.3.18.jar
Removing jars/vecmath-1.5.2.jar
Removing jars/wavelets-2.0.0-SNAPSHOT.jar
Removing jars/weave_jy2java-2.0.0-SNAPSHOT.jar
Removing jars/weka-dev-3.7.6.jar
Removing jars/xalan-2.7.1.jar
Removing jars/xml-apis-1.3.04.jar
Removing jars/yecht-1.0.jar
Removing plugins/3D_Blob_Segmentation-2.0.0-SNAPSHOT.jar
Removing plugins/3D_Objects_Counter-2.0.0-SNAPSHOT.jar
Removing plugins/3D_Viewer-2.0.0-SNAPSHOT.jar
Removing plugins/AnalyzeSkeleton_-2.0.0-SNAPSHOT.jar
Removing plugins/Analyze_Reader_Writer-2.0.0-SNAPSHOT.jar
Removing plugins/Anisotropic_Diffusion_2D-2.0.0-SNAPSHOT.jar
Removing plugins/Archipelago_Plugins-0.5.0-SNAPSHOT.jar
Removing plugins/Arrow_-2.0.0-SNAPSHOT.jar
Removing plugins/Auto_Threshold-1.16-SNAPSHOT.jar
Removing plugins/BalloonSegmentation_-2.0.0-SNAPSHOT.jar
Removing plugins/BeanShell_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Bug_Submitter-2.0.0-SNAPSHOT.jar
Removing plugins/CLI_-2.0.0-SNAPSHOT.jar
Removing plugins/CPU_Meter-2.0.0-SNAPSHOT.jar
Removing plugins/Calculator_Plus-2.0.0-SNAPSHOT.jar
Removing plugins/Clojure_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Colocalisation_Analysis-2.0.0-SNAPSHOT.jar
Removing plugins/Color_Histogram-2.0.6-SNAPSHOT.jar
Removing plugins/Color_Inspector_3D-2.4-SNAPSHOT.jar
Removing plugins/Colour_Deconvolution-2.0.0-SNAPSHOT.jar
Removing plugins/CorrectBleach_-2.0.0.jar
Removing plugins/Descriptor_based_registration-2.0.0-SNAPSHOT.jar
Removing plugins/Dichromacy_-2.0.0-SNAPSHOT.jar
Removing plugins/Differentials_-2.0.0-SNAPSHOT.jar
Removing plugins/Directionality_-2.0.1-SNAPSHOT.jar
Removing plugins/Extended_Depth_Field-2.0.0-SNAPSHOT.jar
Removing plugins/FS_Align_TrakEM2-2.0.0-SNAPSHOT.jar
Removing plugins/FeatureJ_-1.6.1-SNAPSHOT.jar
Removing plugins/Feature_Detection-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Archipelago-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Developer-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Package_Maker-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Plugins-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Updater.jar
Removing plugins/FlowJ_-1.29.1-SNAPSHOT.jar
Removing plugins/Graph_Cut-0.2.0.jar
Removing plugins/Gray_Morphology-2.3.2-SNAPSHOT.jar
Removing plugins/Helmholtz_Analysis-2.0.1-SNAPSHOT.jar
Removing plugins/IJ_Robot-1.0.0.jar
Removing plugins/IO_-2.0.0-SNAPSHOT.jar
Removing plugins/Image_5D-1.2.5.jar
Removing plugins/Image_Expression_Parser-2.0.0-SNAPSHOT.jar
Removing plugins/Interactive_3D_Surface_Plot-2.31.1-SNAPSHOT.jar
Removing plugins/IsoData_Classifier-2.0.0-SNAPSHOT.jar
Removing plugins/JRuby_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Javascript_-2.0.0-SNAPSHOT.jar
Removing plugins/Jython_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Kuwahara_Filter-2.0.0-SNAPSHOT.jar
Removing plugins/Lasso_and_Blow_Tool-2.0.0-SNAPSHOT.jar
Removing plugins/Linear_Kuwahara-2.0.0-SNAPSHOT.jar
Removing plugins/LocalThickness_-3.1.1-SNAPSHOT.jar
Removing plugins/MTrack2_-2.0.0-SNAPSHOT.jar
Removing plugins/MTrackJ_-1.5.1-SNAPSHOT.jar
Removing plugins/M_I_P-2.0.0-SNAPSHOT.jar
Removing plugins/Manual_Tracking-2.0.0-SNAPSHOT.jar
Removing plugins/MosaicJ_-2.0.0-SNAPSHOT.jar
Removing plugins/Multi_Kymograph-2.0.0-SNAPSHOT.jar
Removing plugins/PIV_analyser-1.1.1-SNAPSHOT.jar
Removing plugins/PointPicker_-2.0.0-SNAPSHOT.jar
Removing plugins/QuickPALM_-1.1.1-SNAPSHOT.jar
Removing plugins/RATS_-2.0.0-SNAPSHOT.jar
Removing plugins/RandomJ_-1.5.1-SNAPSHOT.jar
Removing plugins/Reconstruct_Reader-2.0.0-SNAPSHOT.jar
Removing plugins/Refresh_Javas-2.0.0-SNAPSHOT.jar
Removing plugins/SPIM_Opener-2.0.0-SNAPSHOT.jar
Removing plugins/SPIM_Registration-2.0.0-SNAPSHOT.jar
Removing plugins/Samples_-2.0.0-SNAPSHOT.jar
Removing plugins/Scala_Interpreter-1.0.2-SNAPSHOT.jar
Removing plugins/Series_Labeler-2.0.0-SNAPSHOT.jar
Removing plugins/SheppLogan_-2.0.0-SNAPSHOT.jar
Removing plugins/Sholl_Analysis-3.4.2.jar
Removing plugins/Simple_Neurite_Tracer-2.0.2-SNAPSHOT.jar
Removing plugins/Siox_Segmentation-1.0.1-SNAPSHOT.jar
Removing plugins/Skeletonize3D_-1.0.1-SNAPSHOT.jar
Removing plugins/Snakuscule_-2.0.0-SNAPSHOT.jar
Removing plugins/SplineDeformationGenerator_-2.0.0-SNAPSHOT.jar
Removing plugins/StackReg_-2.0.0-SNAPSHOT.jar
Removing plugins/Stack_Manipulation-2.0.0-SNAPSHOT.jar
Removing plugins/Statistical_Region_Merging-2.0.0-SNAPSHOT.jar
Removing plugins/Stitching_-2.0.0-SNAPSHOT.jar
Removing plugins/Sync_Win-1.7-fiji2-SNAPSHOT.jar
Removing plugins/Thread_Killer-2.0.0-SNAPSHOT.jar
Removing plugins/Threshold_Colour-2.0.1-SNAPSHOT.jar
Removing plugins/Time_Lapse-2.0.0.jar
Removing plugins/Time_Stamper-2.0.0-SNAPSHOT.jar
Removing plugins/ToAST_-25.0.1-SNAPSHOT.jar
Removing plugins/TopoJ_-2.0.0-SNAPSHOT.jar
Removing plugins/TrackMate_-2.3.0-SNAPSHOT.jar
Removing plugins/Trainable_Segmentation-2.0.0.jar
Removing plugins/TrakEM2_-1.0b-SNAPSHOT.jar
Removing plugins/TrakEM2_Archipelago-2.0.0-SNAPSHOT.jar
Removing plugins/TransformJ_-2.8.1-SNAPSHOT.jar
Removing plugins/TurboReg_-2.0.0-SNAPSHOT.jar
Removing plugins/UnwarpJ_-2.0.0-SNAPSHOT.jar
Removing plugins/VIB_-2.0.0-SNAPSHOT.jar
Removing plugins/Vaa3d_Reader-2.0.0-SNAPSHOT.jar
Removing plugins/Vaa3d_Writer-1.0.0.jar
Removing plugins/Video_Editing-2.0.0-SNAPSHOT.jar
Removing plugins/View5D_-1.3.1-SNAPSHOT.jar
Removing plugins/Volume_Calculator-1.0.1-SNAPSHOT.jar
Removing plugins/Volume_Viewer-2.01.1-SNAPSHOT.jar
Removing plugins/bUnwarpJ_-2.6.1-SNAPSHOT.jar
Removing plugins/bio-formats_plugins-5.0.2.jar
Removing plugins/blockmatching_-2.0.0-SNAPSHOT.jar
Removing plugins/level_sets-1.0.1-SNAPSHOT.jar
Removing plugins/mpicbg_-0.6.1.jar
Removing plugins/panorama_-2.0.0-SNAPSHOT.jar
Removing plugins/register_virtual_stack_slices-2.0.0-SNAPSHOT.jar
Removing plugins/registration_3d-2.0.0-SNAPSHOT.jar
Removing target/
+ git submodule foreach git clean -x -d -f
Entering 'java/linux'
No submodule mapping found in .gitmodules for path 'java/linux'
Entering 'java/linux-amd64'
No submodule mapping found in .gitmodules for path 'java/linux-amd64'
Entering 'java/macosx-java3d'
No submodule mapping found in .gitmodules for path 'java/macosx-java3d'
Entering 'java/win32'
No submodule mapping found in .gitmodules for path 'java/win32'
Entering 'java/win64'
No submodule mapping found in .gitmodules for path 'java/win64'
+ sh -x ./Build.sh -Dminimaven.verbose=true -Dminimaven.updateinterval=1 --
+ set -a
+ unset CDPATH
+ dirname ./Build.sh
+ CWD=.
+ PATHSEP=:
+ uname -s
+ UNAME_S=Linux
+ LAUNCHER=bin/ImageJ.sh
+ FIJILAUNCHER=
+ uname -m
+ platform=linux64
+ java_submodule=linux-amd64
+ exe=
+ LAUNCHER=ImageJ-linux64
+ FIJILAUNCHER=fiji-linux64
+ FIJILAUNCHER=fiji-linux64
+ test -n linux64
+ test -z 
+ get_java_home
+ test -d 
+ test -n linux-amd64
+ test -d ./java/linux-amd64
+ + ls -t ./java/linux-amd64
head -n 1
+ echo ./java/linux-amd64/jdk1.6.0_24/jre
+ JAVA_HOME=./java/linux-amd64/jdk1.6.0_24/jre
+ test -z linux64
+ test -f ./java/linux-amd64/jdk1.6.0_24/jre/lib/tools.jar
+ test -f ./java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar
+ test -n ./java/linux-amd64/jdk1.6.0_24/jre
+ test -d ./java/linux-amd64/jdk1.6.0_24/jre
+ test -d ./java/linux-amd64/jdk1.6.0_24/jre
+ test -d ./java/linux-amd64/jdk1.6.0_24/jre/jre
+ export PATH=./java/linux-amd64/jdk1.6.0_24/jre/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games:/opt/dell/srvadmin/bin
+ get_java_home
+ test -d ./java/linux-amd64/jdk1.6.0_24/jre
+ echo ./java/linux-amd64/jdk1.6.0_24/jre
+ get_java_home
+ test -d ./java/linux-amd64/jdk1.6.0_24/jre
+ echo ./java/linux-amd64/jdk1.6.0_24/jre
+ PATH=./java/linux-amd64/jdk1.6.0_24/jre/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games:/opt/dell/srvadmin/bin:./java/linux-amd64/jdk1.6.0_24/jre/bin:./java/linux-amd64/jdk1.6.0_24/jre/../bin
+ export PATH
+ cd .
+ pwd
+ CWD=/data/devel/jenkins/jobs/Fiji-daily/workspace
+ ARGV0=/data/devel/jenkins/jobs/Fiji-daily/workspace/./Build.sh
+ MAVEN_HELPER=/data/devel/jenkins/jobs/Fiji-daily/workspace/bin/maven-helper.sh
+ MAVEN_HELPER_URL=https://raw.github.com/scijava/scijava-scripts/master/maven-helper.sh
+ force_update=
+ maven_helper latest-version sc.fiji:javac
+ uptodate /data/devel/jenkins/jobs/Fiji-daily/workspace/./Build.sh /data/devel/jenkins/jobs/Fiji-daily/workspace/bin/maven-helper.sh
+ test -s /data/devel/jenkins/jobs/Fiji-daily/workspace/bin/maven-helper.sh
+ force_update=t
+ curl -fsL https://raw.github.com/scijava/scijava-scripts/master/maven-helper.sh
+ test 2 = 0
+ sh -ax /data/devel/jenkins/jobs/Fiji-daily/workspace/bin/maven-helper.sh latest-version sc.fiji:javac
+ set -e
+ uname -s
+ SONATYPE_DATA_CACHE_URL=http://maven.imagej.net/service/local/data_cache/repositories/sonatype/content
+ SONATYPE_SNAPSHOTS_DATA_CACHE_URL=http://maven.imagej.net/service/local/data_cache/repositories/sonatype-snapshots/content
+ latest_version sc.fiji:javac
+ project_url sc.fiji:javac
+ gav=sc.fiji:javac
+ artifactId sc.fiji:javac
+ result=javac
+ echo javac
+ artifactId=javac
+ + tr . /
groupId sc.fiji:javac
+ echo sc.fiji
+ infix=sc/fiji/javac
+ version sc.fiji:javac
+ result=javac
+ version=
+ root_url sc/fiji/javac releases
+ test snapshots != releases
+ echo http://maven.imagej.net/service/local/repo_groups/public/content
+ project_url=http://maven.imagej.net/service/local/repo_groups/public/content/sc/fiji/javac
+ curl -Is http://maven.imagej.net/service/local/repo_groups/public/content/sc/fiji/javac/
+ header=
+ curl -s /maven-metadata.xml
+ metadata=
+ JAVAC_VERSION=
+ exit
Build step 'Execute shell' marked build as failure