[ImageJ-builds] Build failed in Jenkins: Vaa3d_Reader #7
jenkins at imagej.net
jenkins at imagej.net
Thu Sep 11 16:55:06 CDT 2014
See <http://jenkins.imagej.net/job/Vaa3d_Reader/7/changes>
Changes:
[brunsc] Create unit tests, preparing to debug cross-slice pdb16 difference bug.
[brunsc] Add larger test images for debugging PBD16 read boundary problem.
[brunsc] Fixed read-length related problem with PBD16 reader, by caching runs of difference values for next time.
[brunsc] Refactor Pbd16InputStream to read one 16-bit short at a time.
[brunsc] Allow two-byte short value reads to be split across two separate read() calls.
[brunsc] Create Vaa3dPbdToRaw runnable class to test conversion from vaa3dpbd to vaa3draw format, to test recent code fixes.
------------------------------------------
Started by an SCM change
Building on master in workspace <http://jenkins.imagej.net/job/Vaa3d_Reader/ws/>
Fetching changes from the remote Git repository
Fetching upstream changes from https://github.com/fiji/Vaa3d_Reader
Checking out Revision 29bfeffe97cdcea0aa5e75a18af10c18f5879397 (origin/master)
[workspace] $ /bin/sh -xe /tmp/hudson6885054310584989669.sh
+ git clean -dfx
Removing target/
[workspace] $ /bin/sh -xe /tmp/hudson6039123416336142841.sh
+ mvn -DupdateReleaseInfo=true -Pdeploy-to-imagej deploy
[INFO] Scanning for projects...
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building plugins/Vaa3d_Reader.jar 2.0.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[WARNING] The POM for sc.fiji:fiji-lib:jar:2.0.0 is invalid, transitive dependencies (if any) will not be available, enable debug logging for more details
[INFO]
[INFO] --- scijava-maven-plugin:0.1.1:set-rootdir (set-rootdir) @ Vaa3d_Reader ---
[INFO] Setting rootdir: /data/devel/jenkins/jobs/Vaa3d_Reader/workspace
[INFO]
[INFO] --- buildnumber-maven-plugin:1.2:create (default) @ Vaa3d_Reader ---
[INFO] Checking for local modifications: skipped.
[INFO] Updating project files from SCM: skipped.
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/Vaa3d_Reader/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/Vaa3d_Reader/workspace
[INFO] Storing buildNumber: 29bfeffe97cdcea0aa5e75a18af10c18f5879397 at timestamp: 1410472504987
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/Vaa3d_Reader/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/Vaa3d_Reader/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO]
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ Vaa3d_Reader ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO]
[INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ Vaa3d_Reader ---
[INFO] Compiling 7 source files to /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/target/classes
[INFO]
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ Vaa3d_Reader ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 8 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ Vaa3d_Reader ---
[INFO] Compiling 1 source file to /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/target/test-classes
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR :
[INFO] -------------------------------------------------------------
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[3,23] package org.junit does not exist
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[8,16] package org.junit does not exist
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[12,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[17,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[23,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[31,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[37,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[42,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[51,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[67,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[77,5] cannot find symbol
symbol : class Test
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[20,8] cannot find symbol
symbol : method assertTrue(boolean)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[28,8] cannot find symbol
symbol : method assertEquals(int,long)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[33,8] cannot find symbol
symbol : method assertEquals(int,long)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[39,8] cannot find symbol
symbol : method assertEquals(int,long)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[44,8] cannot find symbol
symbol : method assertEquals(long,long)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[60,16] cannot find symbol
symbol : method assertEquals(int,int)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[94,16] cannot find symbol
symbol : method assertEquals(int,int)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[96,20] cannot find symbol
symbol : method assertEquals(byte,byte)
location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[INFO] 19 errors
[INFO] -------------------------------------------------------------
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 3.939s
[INFO] Finished at: Thu Sep 11 16:55:06 CDT 2014
[INFO] Final Memory: 19M/360M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:testCompile (default-testCompile) on project Vaa3d_Reader: Compilation failure: Compilation failure:
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[3,23] package org.junit does not exist
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[8,16] package org.junit does not exist
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[12,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[17,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[23,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[31,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[37,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[42,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[51,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[67,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[77,5] cannot find symbol
[ERROR] symbol : class Test
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[20,8] cannot find symbol
[ERROR] symbol : method assertTrue(boolean)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[28,8] cannot find symbol
[ERROR] symbol : method assertEquals(int,long)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[33,8] cannot find symbol
[ERROR] symbol : method assertEquals(int,long)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[39,8] cannot find symbol
[ERROR] symbol : method assertEquals(int,long)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[44,8] cannot find symbol
[ERROR] symbol : method assertEquals(long,long)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[60,16] cannot find symbol
[ERROR] symbol : method assertEquals(int,int)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[94,16] cannot find symbol
[ERROR] symbol : method assertEquals(int,int)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] /data/devel/jenkins/jobs/Vaa3d_Reader/workspace/src/test/java/org/janelia/vaa3d/reader/TestVaa3d_Reader.java:[96,20] cannot find symbol
[ERROR] symbol : method assertEquals(byte,byte)
[ERROR] location: class org.janelia.vaa3d.reader.TestVaa3d_Reader
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Execute shell' marked build as failure
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