[ImageJ-builds] Build failed in Jenkins: SpimData #5

Tue Nov 18 06:48:03 CST 2014

See <http://jenkins.imagej.net/job/SpimData/5/changes>

Changes:

[Tobias Pietzsch] Bump to next development cycle

------------------------------------------
[...truncated 30 lines...]
[WARNING] Cannot get the branch information from the git repository: 
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref

[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/SpimData/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/SpimData/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] 
[INFO] --- scijava-maven-plugin:0.4.0:set-rootdir (set-rootdir) @ spim_data ---
[INFO] Setting rootdir: /data/devel/jenkins/jobs/SpimData/workspace
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ spim_data ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ spim_data ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 61 source files to /data/devel/jenkins/jobs/SpimData/workspace/target/classes
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ spim_data ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/SpimData/workspace/src/test/resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ spim_data ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ spim_data ---
[INFO] No tests to run.
[INFO] 
[INFO] --- maven-jar-plugin:2.5:jar (default-jar) @ spim_data ---
[INFO] Building jar: /data/devel/jenkins/jobs/SpimData/workspace/target/spim_data-1.0.0-beta-4-SNAPSHOT.jar
[INFO] 
[INFO] >>> maven-source-plugin:2.3:jar (default) @ spim_data >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ spim_data ---
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO]   Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO]   Adding ignore: com/kenai/constantine/*
[INFO]   Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO]   Adding ignore: jnr/ffi/*
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ spim_data ---
[INFO] 
[INFO] --- scijava-maven-plugin:0.4.0:set-rootdir (set-rootdir) @ spim_data ---
[INFO] 
[INFO] <<< maven-source-plugin:2.3:jar (default) @ spim_data <<<
[INFO] 
[INFO] --- maven-source-plugin:2.3:jar (default) @ spim_data ---
[INFO] Building jar: /data/devel/jenkins/jobs/SpimData/workspace/target/spim_data-1.0.0-beta-4-SNAPSHOT-sources.jar
[INFO] 
[INFO] >>> maven-source-plugin:2.3:jar (attach-sources) @ spim_data >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ spim_data ---
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO]   Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO]   Adding ignore: com/kenai/constantine/*
[INFO]   Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO]   Adding ignore: jnr/ffi/*
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ spim_data ---
[INFO] 
[INFO] --- scijava-maven-plugin:0.4.0:set-rootdir (set-rootdir) @ spim_data ---
[INFO] 
[INFO] <<< maven-source-plugin:2.3:jar (attach-sources) @ spim_data <<<
[INFO] 
[INFO] --- maven-source-plugin:2.3:jar (attach-sources) @ spim_data ---
[WARNING] Artifact sc.fiji:spim_data:java-source:sources:1.0.0-beta-4-SNAPSHOT already attached to project, ignoring duplicate
[INFO] 
[INFO] --- maven-javadoc-plugin:2.9.1:jar (attach-javadocs) @ spim_data ---
[INFO] 
Loading source files for package mpicbg.spim.data...
Loading source files for package mpicbg.spim.data.sequence...
Loading source files for package mpicbg.spim.data.registration...
Loading source files for package mpicbg.spim.data.generic.sequence...
Loading source files for package mpicbg.spim.data.generic...
Loading source files for package mpicbg.spim.data.generic.base...
Constructing Javadoc information...
Standard Doclet version 1.6.0_45
Building tree for all the packages and classes...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/sequence//XmlIoTimePoints.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/registration//ViewRegistration.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/registration//XmlIoViewRegistration.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/generic/sequence//ImgLoaderIo.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/generic//AbstractSpimData.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/generic/base//Entity.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/generic/base//XmlIoEntity.html...
Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/mpicbg/spim/data/generic/base//XmlIoEntityMap.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/overview-frame.html...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/serialized-form.html...
Building index for all the packages and classes...
Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/overview-tree.html...
Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/index-all.html...
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Building index for all classes...
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Generating /data/devel/jenkins/jobs/SpimData/workspace/target/apidocs/stylesheet.css...
41 warnings
[WARNING] Javadoc Warnings
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/SequenceDescription.java:52: warning - @return tag has no arguments.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/SequenceDescription.java:64: warning - @return tag has no arguments.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/base/XmlIoSingleton.java:96: warning - Tag @link: can't find toXml(Object) in mpicbg.spim.data.generic.base.XmlIoSingleton
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:185: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:185: warning - XmlKeys#TIMEPOINTS_LIST_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:87: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:87: warning - XmlKeys#TIMEPOINTS_PATTERN_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:155: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:155: warning - XmlKeys#TIMEPOINTS_RANGE_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:87: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:87: warning - XmlKeys#TIMEPOINTS_PATTERN_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:155: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:155: warning - XmlKeys#TIMEPOINTS_RANGE_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:185: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:185: warning - XmlKeys#TIMEPOINTS_LIST_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/ViewTransformGeneric.java:10: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/ViewTransformGeneric.java:15: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/ViewTransformGeneric.java:10: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/ViewTransformGeneric.java:15: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/XmlIoViewRegistrations.java:37: warning - @param argument "element" is not a parameter name.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/XmlIoViewRegistrations.java:37: warning - XmlKeys#VIEWREGISTRATIONS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/XmlIoViewTransform.java:36: warning - @param argument "element" is not a parameter name.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/XmlIoViewTransform.java:36: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/sequence/BasicViewDescription.java:60: warning - @return tag has no arguments.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/sequence/BasicViewDescription.java:69: warning - @return tag cannot be used in method with void return type.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/sequence/XmlIoBasicViewSetup.java:51: warning - XmlKeys#CHANNEL_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/sequence/XmlIoBasicViewSetups.java:34: warning - XmlKeys#ATTRIBUTES_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/XmlIoAbstractSpimData.java:109: warning - @return tag has no arguments.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/XmlIoAbstractSpimData.java:87: warning - @return tag has no arguments.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/XmlIoAbstractSpimData.java:147: warning - @return tag has no arguments.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/base/XmlIoNamedEntity.java:18: warning - XmlKeys#NAME_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/base/XmlIoNamedEntity.java:18: warning - XmlKeys#NAME_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:185: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:185: warning - XmlKeys#TIMEPOINTS_LIST_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:87: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:87: warning - XmlKeys#TIMEPOINTS_PATTERN_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:155: warning - XmlKeys#TIMEPOINTS_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/sequence/XmlIoTimePoints.java:155: warning - XmlKeys#TIMEPOINTS_RANGE_TYPE (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/ViewTransformGeneric.java:10: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/registration/ViewTransformGeneric.java:15: warning - XmlKeys#VIEWTRANSFORM_TAG (referenced by @value tag) is an unknown reference.
[WARNING] /data/devel/jenkins/jobs/SpimData/workspace/src/main/java/mpicbg/spim/data/generic/base/XmlIoNamedEntity.java:18: warning - XmlKeys#NAME_TAG (referenced by @value tag) is an unknown reference.
[INFO] Fixed Javadoc frame injection vulnerability (CVE-2013-1571) in 1 files.
[INFO] Building jar: /data/devel/jenkins/jobs/SpimData/workspace/target/spim_data-1.0.0-beta-4-SNAPSHOT-javadoc.jar
[INFO] 
[INFO] --- maven-jar-plugin:2.5:test-jar (default) @ spim_data ---
[INFO] Skipping packaging of the test-jar
[INFO] 
[INFO] --- maven-install-plugin:2.5.1:install (default-install) @ spim_data ---
[INFO] Installing /data/devel/jenkins/jobs/SpimData/workspace/target/spim_data-1.0.0-beta-4-SNAPSHOT.jar to /var/lib/jenkins/.m2/repository/sc/fiji/spim_data/1.0.0-beta-4-SNAPSHOT/spim_data-1.0.0-beta-4-SNAPSHOT.jar
[INFO] Installing /data/devel/jenkins/jobs/SpimData/workspace/pom.xml to /var/lib/jenkins/.m2/repository/sc/fiji/spim_data/1.0.0-beta-4-SNAPSHOT/spim_data-1.0.0-beta-4-SNAPSHOT.pom
[INFO] Installing /data/devel/jenkins/jobs/SpimData/workspace/target/spim_data-1.0.0-beta-4-SNAPSHOT-sources.jar to /var/lib/jenkins/.m2/repository/sc/fiji/spim_data/1.0.0-beta-4-SNAPSHOT/spim_data-1.0.0-beta-4-SNAPSHOT-sources.jar
[INFO] Installing /data/devel/jenkins/jobs/SpimData/workspace/target/spim_data-1.0.0-beta-4-SNAPSHOT-javadoc.jar to /var/lib/jenkins/.m2/repository/sc/fiji/spim_data/1.0.0-beta-4-SNAPSHOT/spim_data-1.0.0-beta-4-SNAPSHOT-javadoc.jar
[INFO] 
[INFO] --- imagej-maven-plugin:0.5.4:copy-jars (copy-jars) @ spim_data ---
[INFO] 
[INFO] --- maven-deploy-plugin:2.8.1:deploy (default-deploy) @ spim_data ---
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 9.876s
[INFO] Finished at: Tue Nov 18 06:48:03 CST 2014
[INFO] Final Memory: 22M/569M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-deploy-plugin:2.8.1:deploy (default-deploy) on project spim_data: Deployment failed: repository element was not specified in the POM inside distributionManagement element or in -DaltDeploymentRepository=id::layout::url parameter -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Archiving artifacts