[ImageJ-builds] Build failed in Jenkins: Fiji-Maven #856

jenkins at imagej.net jenkins at imagej.net
Thu Nov 6 17:39:55 CST 2014 

See <http://jenkins.imagej.net/job/Fiji-Maven/856/changes>

Changes:

[Curtis Rueden] Remove obsolete dependencies

[Curtis Rueden] POM: tweak repositories comment

[Curtis Rueden] POM: bump to pom-fiji 5.0.2

[Curtis Rueden] POM: add artifacts migrated from fiji-compat

------------------------------------------
[...truncated 32 lines...]
Removing jars/fiji-lib-2.0.1.jar
Removing jars/fiji-scripting-2.0.0-SNAPSHOT.jar
Removing jars/gentyref-1.1.0.jar
Removing jars/gson-2.2.4.jar
Removing jars/ij-1.49d.jar
Removing jars/ij1-patcher-0.10.0.jar
Removing jars/imagej-2.0.0-rc-9.jar
Removing jars/imagej-common-0.8.0.jar
Removing jars/imagej-legacy-0.6.0.jar
Removing jars/imagej-ops-0.4.1.jar
Removing jars/imagej-plugins-commands-0.2.3.jar
Removing jars/imagej-plugins-tools-0.1.1.jar
Removing jars/imagej-plugins-uploader-ssh-0.1.1.jar
Removing jars/imagej-plugins-uploader-webdav-0.1.1.jar
Removing jars/imagej-ui-awt-0.1.2.jar
Removing jars/imagej-ui-swing-0.5.0.jar
Removing jars/imagej-updater-0.4.3.jar
Removing jars/imagescience-2.4.2-SNAPSHOT.jar
Removing jars/imageware-2.0.0-SNAPSHOT.jar
Removing jars/imglib2-2.0.0-beta-26.jar
Removing jars/imglib2-algorithms-2.0.0-beta-26.jar
Removing jars/imglib2-algorithms-gpl-2.0.0-beta-26.jar
Removing jars/imglib2-ij-2.0.0-beta-26.jar
Removing jars/imglib2-meta-2.0.0-beta-26.jar
Removing jars/imglib2-ops-2.0.0-beta-26.jar
Removing jars/imglib2-realtransform-2.0.0-beta-26.jar
Removing jars/imglib2-ui-2.0.0-beta-26.jar
Removing jars/invokebinder-1.2.jar
Removing jars/itext-2.1.5.jar
Removing jars/itextpdf-5.1.1.jar
Removing jars/jama-1.0.2.jar
Removing jars/java-cup-0.11a.jar
Removing jars/javac-1.6.0.24-ubuntu-fiji1.jar
Removing jars/javassist-3.16.1-GA.jar
Removing jars/jcodings-1.0.10.jar
Removing jars/jcommon-1.0.17.jar
Removing jars/jdatepicker-1.3.2.jar
Removing jars/jdom2-2.0.5.jar
Removing jars/jep-2.4.2.jar
Removing jars/jffi-1.2.7-native.jar
Removing jars/jffi-1.2.7.jar
Removing jars/jfreechart-1.0.14.jar
Removing jars/jgoodies-common-1.7.0.jar
Removing jars/jgoodies-forms-1.7.2.jar
Removing jars/jhdf5-13.06.2.jar
Removing jars/jhotdraw-7.6.0.jar
Removing jars/jna-3.2.7.jar
Removing jars/jnr-constants-0.8.5.jar
Removing jars/jnr-enxio-0.4.jar
Removing jars/jnr-ffi-1.0.7.jar
Removing jars/jnr-netdb-1.1.2.jar
Removing jars/jnr-posix-3.0.1.jar
Removing jars/jnr-unixsocket-0.3.jar
Removing jars/jnr-x86asm-1.0.2.jar
Removing jars/joda-time-2.2.jar
Removing jars/joni-2.1.1.jar
Removing jars/jpedalSTD-2.80b11.jar
Removing jars/jruby-1.7.11.jar
Removing jars/jruby-core-1.7.11.jar
Removing jars/jruby-stdlib-1.7.11.jar
Removing jars/js-1.7R2.jar
Removing jars/jsch-0.1.49.jar
Removing jars/jython-2.5.2.jar
Removing jars/jython-shaded-2.5.3.jar
Removing jars/jzlib-1.0.7.jar
Removing jars/kryo-2.21-shaded.jar
Removing jars/legacy-imglib1-2.0.0-SNAPSHOT.jar
Removing jars/log4j-1.2.17.jar
Removing jars/logback-classic-1.1.1.jar
Removing jars/logback-core-1.1.1.jar
Removing jars/mapdb-1.0.3.jar
Removing jars/markdownj-0.3.0-1.0.2b4.jar
Removing jars/miglayout-3.7.3.1-swing.jar
Removing jars/mij-1.3.6-fiji2-SNAPSHOT.jar
Removing jars/mines-jtk-20100113.jar
Removing jars/minimaven-2.1.3.jar
Removing jars/mpicbg-0.6.1.jar
Removing jars/nailgun-server-0.9.1.jar
Removing jars/native-lib-loader-2.0.1.jar
Removing jars/netcdf-4.3.19.jar
Removing jars/object-inspector-0.1.jar
Removing jars/pal-optimization-2.0.0-SNAPSHOT.jar
Removing jars/pentaho-package-manager-1.0.0.jar
Removing jars/perf4j-0.9.13.jar
Removing jars/rsyntaxtextarea-2.5.2.jar
Removing jars/scala-compiler-2.10.0.jar
Removing jars/scala-library-2.10.0.jar
Removing jars/scala-reflect-2.10.0.jar
Removing jars/scifio-0.15.4.jar
Removing jars/scifio-bf-compat-1.8.2.jar
Removing jars/scifio-jai-imageio-1.1.0.jar
Removing jars/scifio-lifesci-0.5.0.jar
Removing jars/scifio-ome-xml-0.9.0.jar
Removing jars/scifio-tools-0.14.2.jar
Removing jars/scijava-common-2.27.0.jar
Removing jars/scijava-plugins-commands-0.1.5.jar
Removing jars/scijava-plugins-platforms-0.1.1.jar
Removing jars/scijava-plugins-text-markdown-0.1.1.jar
Removing jars/scijava-plugins-text-plain-0.1.1.jar
Removing jars/scijava-ui-awt-0.1.2.jar
Removing jars/scijava-ui-swing-0.2.4.jar
Removing jars/scripting-beanshell-0.1.1.jar
Removing jars/scripting-clojure-0.1.0.jar
Removing jars/scripting-java-0.2.3.jar
Removing jars/scripting-javascript-0.2.0.jar
Removing jars/scripting-jruby-0.1.1.jar
Removing jars/scripting-jython-0.1.0.jar
Removing jars/serializer-2.7.1.jar
Removing jars/slf4j-api-1.7.6.jar
Removing jars/slf4j-log4j12-1.7.2.jar
Removing jars/snakeyaml-1.13.jar
Removing jars/spim_data-1.0.0-beta-3-SNAPSHOT.jar
Removing jars/swing-checkbox-tree-1.0.0.jar
Removing jars/udunits-4.3.18.jar
Removing jars/wavelets-2.0.0-SNAPSHOT.jar
Removing jars/weave_jy2java-2.0.0-SNAPSHOT.jar
Removing jars/weka-dev-3.7.6.jar
Removing jars/xalan-2.7.1.jar
Removing jars/xml-apis-1.3.04.jar
Removing jars/yecht-1.0.jar
Removing plugins/3D_Blob_Segmentation-2.0.0-SNAPSHOT.jar
Removing plugins/3D_Objects_Counter-2.0.0-SNAPSHOT.jar
Removing plugins/3D_Viewer-2.0.0-SNAPSHOT.jar
Removing plugins/AnalyzeSkeleton_-2.0.0-SNAPSHOT.jar
Removing plugins/Analyze_Reader_Writer-2.0.0-SNAPSHOT.jar
Removing plugins/Anisotropic_Diffusion_2D-2.0.0-SNAPSHOT.jar
Removing plugins/Archipelago_Plugins-0.5.0-SNAPSHOT.jar
Removing plugins/Arrow_-2.0.0-SNAPSHOT.jar
Removing plugins/Auto_Threshold-1.16-SNAPSHOT.jar
Removing plugins/BalloonSegmentation_-2.0.0-SNAPSHOT.jar
Removing plugins/BeanShell_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Bug_Submitter-2.0.0-SNAPSHOT.jar
Removing plugins/CLI_-2.0.0-SNAPSHOT.jar
Removing plugins/CPU_Meter-2.0.0-SNAPSHOT.jar
Removing plugins/Calculator_Plus-2.0.0-SNAPSHOT.jar
Removing plugins/Clojure_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Colocalisation_Analysis-2.0.0-SNAPSHOT.jar
Removing plugins/Color_Histogram-2.0.6-SNAPSHOT.jar
Removing plugins/Color_Inspector_3D-2.4-SNAPSHOT.jar
Removing plugins/Colour_Deconvolution-2.0.0-SNAPSHOT.jar
Removing plugins/CorrectBleach_-2.0.0.jar
Removing plugins/Descriptor_based_registration-2.0.0-SNAPSHOT.jar
Removing plugins/Dichromacy_-2.0.0-SNAPSHOT.jar
Removing plugins/Differentials_-2.0.0-SNAPSHOT.jar
Removing plugins/Directionality_-2.0.1-SNAPSHOT.jar
Removing plugins/Extended_Depth_Field-2.0.0-SNAPSHOT.jar
Removing plugins/FS_Align_TrakEM2-2.0.0-SNAPSHOT.jar
Removing plugins/FeatureJ_-1.6.1-SNAPSHOT.jar
Removing plugins/Feature_Detection-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Archipelago-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Developer-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Package_Maker-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Plugins-2.0.0-SNAPSHOT.jar
Removing plugins/Fiji_Updater.jar
Removing plugins/FlowJ_-1.29.1-SNAPSHOT.jar
Removing plugins/Graph_Cut-0.2.0.jar
Removing plugins/Gray_Morphology-2.3.2-SNAPSHOT.jar
Removing plugins/Helmholtz_Analysis-2.0.1-SNAPSHOT.jar
Removing plugins/IJ_Robot-1.0.0.jar
Removing plugins/IO_-2.0.0-SNAPSHOT.jar
Removing plugins/Image_5D-1.2.5.jar
Removing plugins/Image_Expression_Parser-2.0.0-SNAPSHOT.jar
Removing plugins/Interactive_3D_Surface_Plot-2.31.1-SNAPSHOT.jar
Removing plugins/IsoData_Classifier-2.0.0-SNAPSHOT.jar
Removing plugins/JRuby_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Javascript_-2.0.0-SNAPSHOT.jar
Removing plugins/Jython_Interpreter-2.0.0-SNAPSHOT.jar
Removing plugins/Kuwahara_Filter-2.0.0-SNAPSHOT.jar
Removing plugins/Lasso_and_Blow_Tool-2.0.0-SNAPSHOT.jar
Removing plugins/Linear_Kuwahara-2.0.0-SNAPSHOT.jar
Removing plugins/LocalThickness_-3.1.1-SNAPSHOT.jar
Removing plugins/MTrack2_-2.0.0-SNAPSHOT.jar
Removing plugins/MTrackJ_-1.5.1-SNAPSHOT.jar
Removing plugins/M_I_P-2.0.0-SNAPSHOT.jar
Removing plugins/Manual_Tracking-2.0.0-SNAPSHOT.jar
Removing plugins/MosaicJ_-2.0.0-SNAPSHOT.jar
Removing plugins/Multi_Kymograph-2.0.0-SNAPSHOT.jar
Removing plugins/PIV_analyser-1.1.1-SNAPSHOT.jar
Removing plugins/QuickPALM_-1.1.1-SNAPSHOT.jar
Removing plugins/RATS_-2.0.0-SNAPSHOT.jar
Removing plugins/RandomJ_-1.5.1-SNAPSHOT.jar
Removing plugins/Reconstruct_Reader-2.0.0-SNAPSHOT.jar
Removing plugins/Refresh_Javas-2.0.0-SNAPSHOT.jar
Removing plugins/SPIM_Opener-2.0.0-SNAPSHOT.jar
Removing plugins/SPIM_Registration-2.0.0-SNAPSHOT.jar
Removing plugins/Samples_-2.0.0-SNAPSHOT.jar
Removing plugins/Scala_Interpreter-1.0.2-SNAPSHOT.jar
Removing plugins/Series_Labeler-2.0.0-SNAPSHOT.jar
Removing plugins/Sholl_Analysis-3.4.2.jar
Removing plugins/Simple_Neurite_Tracer-2.0.2-SNAPSHOT.jar
Removing plugins/Siox_Segmentation-1.0.1-SNAPSHOT.jar
Removing plugins/Skeletonize3D_-1.0.1-SNAPSHOT.jar
Removing plugins/Snakuscule_-2.0.0-SNAPSHOT.jar
Removing plugins/SplineDeformationGenerator_-2.0.0-SNAPSHOT.jar
Removing plugins/StackReg_-2.0.0-SNAPSHOT.jar
Removing plugins/Stack_Manipulation-2.0.0-SNAPSHOT.jar
Removing plugins/Statistical_Region_Merging-2.0.0-SNAPSHOT.jar
Removing plugins/Stitching_-2.0.0-SNAPSHOT.jar
Removing plugins/Sync_Win-1.7-fiji2-SNAPSHOT.jar
Removing plugins/Thread_Killer-2.0.0-SNAPSHOT.jar
Removing plugins/Threshold_Colour-2.0.1-SNAPSHOT.jar
Removing plugins/Time_Lapse-2.0.0.jar
Removing plugins/Time_Stamper-2.0.0-SNAPSHOT.jar
Removing plugins/ToAST_-25.0.1-SNAPSHOT.jar
Removing plugins/TopoJ_-2.0.0-SNAPSHOT.jar
Removing plugins/TrackMate_-2.3.0-SNAPSHOT.jar
Removing plugins/Trainable_Segmentation-2.0.0.jar
Removing plugins/TrakEM2_-1.0b-SNAPSHOT.jar
Removing plugins/TrakEM2_Archipelago-2.0.0-SNAPSHOT.jar
Removing plugins/TransformJ_-2.8.1-SNAPSHOT.jar
Removing plugins/TurboReg_-2.0.0-SNAPSHOT.jar
Removing plugins/VIB_-2.0.0-SNAPSHOT.jar
Removing plugins/Vaa3d_Reader-2.0.0-SNAPSHOT.jar
Removing plugins/Vaa3d_Writer-1.0.0.jar
Removing plugins/Video_Editing-2.0.0-SNAPSHOT.jar
Removing plugins/View5D_-1.3.1-SNAPSHOT.jar
Removing plugins/Volume_Calculator-1.0.1-SNAPSHOT.jar
Removing plugins/Volume_Viewer-2.01.1-SNAPSHOT.jar
Removing plugins/bUnwarpJ_-2.6.1-SNAPSHOT.jar
Removing plugins/blockmatching_-2.0.0-SNAPSHOT.jar
Removing plugins/level_sets-1.0.1-SNAPSHOT.jar
Removing plugins/mpicbg_-0.6.1.jar
Removing plugins/panorama_-2.0.0-SNAPSHOT.jar
Removing plugins/register_virtual_stack_slices-2.0.0-SNAPSHOT.jar
Removing plugins/registration_3d-2.0.0-SNAPSHOT.jar
[workspace] $ mvn -f pom.xml -U clean deploy
[INFO] Scanning for projects...
[ERROR] The build could not read 1 project -> [Help 1]
[ERROR]   
[ERROR]   The project sc.fiji:fiji:2.0.0-beta-1-SNAPSHOT (/data/devel/jenkins/jobs/Fiji-Maven/workspace/pom.xml) has 12 errors
[ERROR]     'dependencies.dependency.version' for sc.fiji:SPIM_Registration:jar is missing. @ line 54, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:Stitching_:jar is missing. @ line 62, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:Trainable_Segmentation:jar is missing. @ line 90, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:Descriptor_based_registration:jar is missing. @ line 190, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:FS_Align_TrakEM2:jar is missing. @ line 210, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:Feature_Detection:jar is missing. @ line 218, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:Graph_Cut:jar must be a valid version but is '${Graph_Cut.version}'. @ sc.fiji:pom-fiji:5.0.2, /var/lib/jenkins/.m2/repository/sc/fiji/pom-fiji/5.0.2/pom-fiji-5.0.2.pom, line 291, column 14
[ERROR]     'dependencies.dependency.version' for sc.fiji:Reconstruct_Reader:jar is missing. @ line 330, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:TrakEM2_:jar is missing. @ line 394, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:TrakEM2_Archipelago:jar is missing. @ line 398, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:blockmatching_:jar is missing. @ line 438, column 15
[ERROR]     'dependencies.dependency.version' for sc.fiji:register_virtual_stack_slices:jar is missing. @ line 454, column 15
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingException
Build step 'Invoke top-level Maven targets' marked build as failure

More information about the ImageJ-builds mailing list