[ImageJ-builds] Build failed in Jenkins: Siox_Segmentation #16

jenkins at imagej.net jenkins at imagej.net
Thu Nov 6 05:08:46 CST 2014


See <http://jenkins.imagej.net/job/Siox_Segmentation/16/>

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[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ Siox_Segmentation ---
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/Siox_Segmentation/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/Siox_Segmentation/workspace
[INFO] Storing buildNumber: c6dd13981fd695a5bfb215defe0852fd973ee418 at timestamp: 1415272116514
[WARNING] Cannot get the branch information from the git repository: 
Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref

[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/Siox_Segmentation/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/Siox_Segmentation/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] 
[INFO] --- scijava-maven-plugin:0.2.0:set-rootdir (set-rootdir) @ Siox_Segmentation ---
[INFO] Setting rootdir: /data/devel/jenkins/jobs/Siox_Segmentation/workspace
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ Siox_Segmentation ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ Siox_Segmentation ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 19 source files to /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/classes
[WARNING] Note: /data/devel/jenkins/jobs/Siox_Segmentation/workspace/src/main/java/org/siox/example/ControlJPanel.java uses or overrides a deprecated API.
[WARNING] Note: Recompile with -Xlint:deprecation for details.
[WARNING] Note: Some input files use unchecked or unsafe operations.
[WARNING] Note: Recompile with -Xlint:unchecked for details.
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ Siox_Segmentation ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/Siox_Segmentation/workspace/src/test/resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ Siox_Segmentation ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 1 source file to /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/test-classes
[INFO] 
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ Siox_Segmentation ---
[INFO] Surefire report directory: /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/surefire-reports

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running siox.TestSioxGUI
Tests run: 0, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 sec - in siox.TestSioxGUI

Results :

Tests run: 0, Failures: 0, Errors: 0, Skipped: 0

[INFO] 
[INFO] --- maven-jar-plugin:2.5:jar (default-jar) @ Siox_Segmentation ---
[INFO] Building jar: /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3.jar
[INFO] 
[INFO] >>> maven-source-plugin:2.3:jar (default) @ Siox_Segmentation >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ Siox_Segmentation ---
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO]   Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO]   Adding ignore: com/kenai/constantine/*
[INFO]   Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO]   Adding ignore: jnr/ffi/*
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ Siox_Segmentation ---
[INFO] 
[INFO] --- scijava-maven-plugin:0.2.0:set-rootdir (set-rootdir) @ Siox_Segmentation ---
[INFO] 
[INFO] <<< maven-source-plugin:2.3:jar (default) @ Siox_Segmentation <<<
[INFO] 
[INFO] --- maven-source-plugin:2.3:jar (default) @ Siox_Segmentation ---
[INFO] Building jar: /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3-sources.jar
[INFO] 
[INFO] >>> maven-source-plugin:2.3:jar (attach-sources) @ Siox_Segmentation >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.3.1:enforce (enforce-rules) @ Siox_Segmentation ---
[INFO] Adding ignorable dependency: null:jcodings:null
[INFO]   Adding ignore: org/jcodings/*
[INFO] Adding ignorable dependency: null:jnr-constants:null
[INFO]   Adding ignore: com/kenai/constantine/*
[INFO]   Adding ignore: jnr/constants/*
[INFO] Adding ignorable dependency: null:jnr-ffi:null
[INFO]   Adding ignore: jnr/ffi/*
[INFO] 
[INFO] --- buildnumber-maven-plugin:1.3:create (default) @ Siox_Segmentation ---
[INFO] 
[INFO] --- scijava-maven-plugin:0.2.0:set-rootdir (set-rootdir) @ Siox_Segmentation ---
[INFO] 
[INFO] <<< maven-source-plugin:2.3:jar (attach-sources) @ Siox_Segmentation <<<
[INFO] 
[INFO] --- maven-source-plugin:2.3:jar (attach-sources) @ Siox_Segmentation ---
[WARNING] Artifact sc.fiji:Siox_Segmentation:java-source:sources:1.0.3 already attached to project, ignoring duplicate
[INFO] 
[INFO] --- maven-javadoc-plugin:2.9.1:jar (attach-javadocs) @ Siox_Segmentation ---
[INFO] 
Loading source files for package org.siox.example...
Loading source files for package org.siox...
Loading source files for package org.siox.util...
Loading source files for package siox...
Constructing Javadoc information...
Standard Doclet version 1.6.0_45
Building tree for all the packages and classes...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//ControlJPanel.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//CursorFactory.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//ExtensionFileFilter.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//ImagePane.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//JRuler.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//Main.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//ScrollDisplay.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox//SioxSegmentator.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/util//IntArrayList.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/util//IntHashMap.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/util//Utils.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//ControlJPanel.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//ImageOverlay.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//Load_Segmentation.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//RoiOverlay.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//SegmentationGUI.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//SegmentationInfo.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//Siox_Segmentation.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/overview-frame.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox//package-frame.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox//package-summary.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox//package-tree.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//package-frame.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//package-summary.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/example//package-tree.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/util//package-frame.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/util//package-summary.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/org/siox/util//package-tree.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//package-frame.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//package-summary.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/siox//package-tree.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/constant-values.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/serialized-form.html...
Building index for all the packages and classes...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/overview-tree.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/index-all.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/deprecated-list.html...
Building index for all classes...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/allclasses-frame.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/allclasses-noframe.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/index.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/overview-summary.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/help-doc.html...
Generating /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/apidocs/stylesheet.css...
2 warnings
[WARNING] Javadoc Warnings
[WARNING] /data/devel/jenkins/jobs/Siox_Segmentation/workspace/src/main/java/org/siox/SioxSegmentator.java:198: warning - Tag @author cannot be used in constructor documentation.  It can only be used in the following types of documentation: overview, package, class/interface.
[WARNING] /data/devel/jenkins/jobs/Siox_Segmentation/workspace/src/main/java/org/siox/SioxSegmentator.java:410: warning - Tag @author cannot be used in method documentation.  It can only be used in the following types of documentation: overview, package, class/interface.
[INFO] Fixed Javadoc frame injection vulnerability (CVE-2013-1571) in 1 files.
[INFO] Building jar: /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3-javadoc.jar
[INFO] 
[INFO] --- maven-jar-plugin:2.5:test-jar (default) @ Siox_Segmentation ---
[INFO] Building jar: /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3-tests.jar
[INFO] 
[INFO] --- maven-install-plugin:2.5.1:install (default-install) @ Siox_Segmentation ---
[INFO] Installing /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3.jar
[INFO] Installing /data/devel/jenkins/jobs/Siox_Segmentation/workspace/pom.xml to /var/lib/jenkins/.m2/repository/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3.pom
[INFO] Installing /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3-sources.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3-sources.jar
[INFO] Installing /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3-javadoc.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3-javadoc.jar
[INFO] Installing /data/devel/jenkins/jobs/Siox_Segmentation/workspace/target/Siox_Segmentation-1.0.3-tests.jar to /var/lib/jenkins/.m2/repository/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3-tests.jar
[INFO] 
[INFO] --- imagej-maven-plugin:0.5.4:copy-jars (copy-jars) @ Siox_Segmentation ---
[INFO] Property 'imagej.app.directory' unset; Skipping copy-jars
[INFO] 
[INFO] --- maven-deploy-plugin:2.8.1:deploy (default-deploy) @ Siox_Segmentation ---
Uploading: dav:http://maven.imagej.net/content/repositories/releases/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3.jar
Nov 6, 2014 5:08:46 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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Nov 6, 2014 5:08:46 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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Uploading: http://maven.imagej.net/content/repositories/releases/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3.pom
Nov 6, 2014 5:08:46 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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Nov 6, 2014 5:08:46 AM org.apache.commons.httpclient.auth.AuthChallengeProcessor selectAuthScheme
INFO: basic authentication scheme selected
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[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 12.301s
[INFO] Finished at: Thu Nov 06 05:08:46 CST 2014
[INFO] Final Memory: 27M/566M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-deploy-plugin:2.8.1:deploy (default-deploy) on project Siox_Segmentation: Failed to deploy artifacts: Could not transfer artifact sc.fiji:Siox_Segmentation:jar:1.0.3 from/to imagej.releases (dav:http://maven.imagej.net/content/repositories/releases): Failed to transfer file: http://maven.imagej.net/content/repositories/releases/sc/fiji/Siox_Segmentation/1.0.3/Siox_Segmentation-1.0.3.jar. Return code is: 400 -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Archiving artifacts



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