[ImageJ-builds] Build failed in Jenkins: Fiji-Maven #721
jenkins at imagej.net
jenkins at imagej.net
Mon Mar 3 14:26:35 CST 2014
See <http://jenkins.imagej.net/job/Fiji-Maven/721/changes>
Changes:
[Johannes Schindelin] Fix deadlock with the EDT while opening the legacy editor
[Johannes Schindelin] Let Simple Neurite Tracer work with newer JUnit
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[INFO] --- imagej-maven-plugin:0.3.1:copy-jars (copy-jars) @ Fiji_Plugins ---
[INFO] Copying Fiji_Plugins-2.0.0-SNAPSHOT.jar to /data/devel/jenkins/jobs/Fiji-Maven/workspace/plugins
[INFO] Dependency VIB-lib-2.0.0-SNAPSHOT.jar is already there; skipping
[INFO] Copying jama-1.0.2.jar to /data/devel/jenkins/jobs/Fiji-Maven/workspace/jars
[INFO] Deleted overridden jama-1.0.3.jar
[INFO] Dependency jzlib-1.0.7.jar is already there; skipping
[INFO] Dependency pal-optimization-2.0.0-SNAPSHOT.jar is already there; skipping
[INFO] Dependency fiji-lib-2.0.0-SNAPSHOT.jar is already there; skipping
[INFO] Dependency ij-1.48r.jar is already there; skipping
[INFO] Dependency ij-core-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Copying scijava-common-2.9.0.jar to /data/devel/jenkins/jobs/Fiji-Maven/workspace/jars
[INFO] Deleted overridden scijava-common-2.10.0.jar
[INFO] Dependency eventbus-1.4.jar is already there; skipping
[INFO] Dependency ij-commands-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-data-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency imglib2-algorithms-2.0.0-beta-24.jar is already there; skipping
[INFO] Dependency mines-jtk-20100113.jar is already there; skipping
[INFO] Copying jama-1.0.3.jar to /data/devel/jenkins/jobs/Fiji-Maven/workspace/jars
[INFO] Deleted overridden jama-1.0.2.jar
[INFO] Dependency scifio-0.9.2.jar is already there; skipping
[INFO] Dependency jai_imageio-1.0.1.jar is already there; skipping
[INFO] Dependency mapdb-0.9.7.jar is already there; skipping
[INFO] Dependency serializer-2.7.1.jar is already there; skipping
[INFO] Dependency xml-apis-1.3.04.jar is already there; skipping
[INFO] Dependency xalan-2.7.1.jar is already there; skipping
[INFO] Dependency ij-options-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-tools-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-ui-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-updater-core-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency imglib2-2.0.0-beta-24.jar is already there; skipping
[INFO] Dependency imglib2-meta-2.0.0-beta-24.jar is already there; skipping
[INFO] Dependency udunits-4.3.18.jar is already there; skipping
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[INFO] Dependency object-inspector-0.1.jar is already there; skipping
[INFO] Dependency base64-2.3.8.jar is already there; skipping
[INFO] Dependency fiji-compat-2.0.0-SNAPSHOT.jar is already there; skipping
[INFO] Dependency ij-legacy-2.0.0-beta-7.7.1.jar is already there; skipping
[INFO] Dependency ij-util-awt-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency imglib2-ij-2.0.0-beta-24.jar is already there; skipping
[INFO] Dependency javassist-3.16.1-GA.jar is already there; skipping
[INFO] Dependency ij1-patcher-0.1.1.jar is already there; skipping
[INFO] Dependency ij-app-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-scripting-beanshell-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency bsh-2.0b4.jar is already there; skipping
[INFO] Dependency ij-scripting-clojure-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency clojure-1.3.0.jar is already there; skipping
[INFO] Dependency ij-scripting-java-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-minimaven-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-scripting-javascript-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-scripting-jruby-2.0.0-beta-7.7.jar is already there; skipping
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[INFO] Dependency markdownj-0.3.0-1.0.2b4.jar is already there; skipping
[INFO] Dependency ij-updater-ssh-2.0.0-beta-7.7.jar is already there; skipping
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[INFO] Dependency ij-updater-webdav-2.0.0-beta-7.7.jar is already there; skipping
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[INFO] Dependency ij-ui-common-awt-2.0.0-beta-7.7.jar is already there; skipping
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[INFO] Dependency miglayout-3.7.3.1-swing.jar is already there; skipping
[INFO] Dependency jdatepicker-1.3.2.jar is already there; skipping
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[INFO] Dependency ij-ui-swing-commands-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-ui-swing-script-editor-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency rsyntaxtextarea-2.0.4.1.jar is already there; skipping
[INFO] Dependency ij-ui-swing-tools-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency ij-ui-swing-updater-2.0.0-beta-7.7.jar is already there; skipping
[INFO] Dependency log4j-1.2.17.jar is already there; skipping
[INFO] Dependency slf4j-log4j12-1.7.2.jar is already there; skipping
[INFO] Dependency slf4j-api-1.7.2.jar is already there; skipping
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building plugins/Descriptor_based_registration.jar 2.0.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
Downloading: http://maven.imagej.net/content/groups/public/sc/fiji/SPIM_Registration/2.0.0-SNAPSHOT/maven-metadata.xml
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Downloading: http://maven.imagej.net/content/repositories/snapshots/sc/fiji/SPIM_Opener/2.0.0-SNAPSHOT/maven-metadata.xml
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Downloaded: http://maven.imagej.net/content/groups/public/sc/fiji/SPIM_Opener/2.0.0-SNAPSHOT/maven-metadata.xml (982 B at 47.9 KB/sec)
Downloading: http://maven.imagej.net/content/groups/public/ome/scifio/5.0.0/scifio-5.0.0.pom
Downloading: http://repo.maven.apache.org/maven2/ome/scifio/5.0.0/scifio-5.0.0.pom
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Downloading: http://maven.imagej.net/content/repositories/snapshots/ome/scifio/5.0.0/scifio-5.0.0.pom
[WARNING] The POM for ome:scifio:jar:5.0.0 is missing, no dependency information available
Downloading: http://maven.imagej.net/content/groups/public/ome/scifio/5.0.0/scifio-5.0.0.jar
Downloading: http://repo.maven.apache.org/maven2/ome/scifio/5.0.0/scifio-5.0.0.jar
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[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Aggregator project for the Fiji project ........... SUCCESS [1.375s]
[INFO] Aggregator project for the Fiji plugins ........... SUCCESS [0.031s]
[INFO] jars/fiji-lib.jar ................................. SUCCESS [2.689s]
[INFO] jars/pal-optimization.jar ......................... SUCCESS [0.906s]
[INFO] jars/VIB-lib.jar .................................. SUCCESS [5.608s]
[INFO] plugins/3D_Viewer.jar ............................. SUCCESS [6.468s]
[INFO] plugins/level_sets.jar ............................ SUCCESS [1.251s]
[INFO] plugins/3D_Blob_Segmentation.jar .................. SUCCESS [0.909s]
[INFO] plugins/3D_Objects_Counter.jar .................... SUCCESS [0.680s]
[INFO] plugins/AnalyzeSkeleton_.jar ...................... SUCCESS [0.896s]
[INFO] plugins/Analyze_Reader_Writer.jar ................. SUCCESS [0.497s]
[INFO] plugins/Anisotropic_Diffusion_2D.jar .............. SUCCESS [0.587s]
[INFO] plugins/Fiji_Archipelago.jar ...................... SUCCESS [2.181s]
[INFO] jars/imagescience.jar ............................. SUCCESS [2.646s]
[INFO] plugins/Trainable_Segmentation.jar ................ SUCCESS [4.666s]
[INFO] plugins/Archipelago_Plugins.jar ................... SUCCESS [3.178s]
[INFO] plugins/Arrow_.jar ................................ SUCCESS [0.786s]
[INFO] plugins/Auto_Threshold.jar ........................ SUCCESS [0.807s]
[INFO] plugins/BalloonSegmentation_.jar .................. SUCCESS [2.678s]
[INFO] jars/fiji-compat.jar .............................. SUCCESS [5.626s]
[INFO] jars/fiji-scripting.jar ........................... SUCCESS [1.273s]
[INFO] plugins/BeanShell_Interpreter.jar ................. SUCCESS [0.797s]
[INFO] plugins/Bug_Submitter.jar ......................... SUCCESS [0.810s]
[INFO] plugins/CLI_.jar .................................. SUCCESS [1.414s]
[INFO] plugins/CPU_Meter.jar ............................. SUCCESS [0.496s]
[INFO] plugins/Calculator_Plus.jar ....................... SUCCESS [0.455s]
[INFO] plugins/Clojure_Interpreter.jar ................... SUCCESS [1.171s]
[INFO] plugins/Color_Histogram.jar ....................... SUCCESS [0.763s]
[INFO] plugins/Color_Inspector_3D.jar .................... SUCCESS [1.916s]
[INFO] plugins/Colour_Deconvolution.jar .................. SUCCESS [0.642s]
[INFO] plugins/CorrectBleach_.jar ........................ SUCCESS [0.571s]
[INFO] plugins/Fiji_Plugins.jar .......................... SUCCESS [1.531s]
[INFO] plugins/Descriptor_based_registration.jar ......... FAILURE [2.086s]
[INFO] plugins/Dichromacy_.jar ........................... SKIPPED
[INFO] plugins/Differentials_.jar ........................ SKIPPED
[INFO] plugins/Directionality_.jar ....................... SKIPPED
[INFO] jars/imageware.jar ................................ SKIPPED
[INFO] jars/wavelets.jar ................................. SKIPPED
[INFO] plugins/Extended_Depth_Field.jar .................. SKIPPED
[INFO] plugins/FS_Align_TrakEM2.jar ...................... SKIPPED
[INFO] plugins/FeatureJ_.jar ............................. SKIPPED
[INFO] plugins/Feature_Detection.jar ..................... SKIPPED
[INFO] jars/fake.jar ..................................... SKIPPED
[INFO] plugins/JRuby_Interpreter.jar ..................... SKIPPED
[INFO] plugins/Javascript_.jar ........................... SKIPPED
[INFO] plugins/Jython_Interpreter.jar .................... SKIPPED
[INFO] plugins/Refresh_Javas.jar ......................... SKIPPED
[INFO] plugins/Script_Editor.jar ......................... SKIPPED
[INFO] plugins/Fiji_Developer.jar ........................ SKIPPED
[INFO] plugins/Fiji_Package_Maker.jar .................... SKIPPED
[INFO] plugins/Fiji_Updater.jar .......................... SKIPPED
[INFO] plugins/FlowJ_.jar ................................ SKIPPED
[INFO] plugins/Graph_Cut.jar ............................. SKIPPED
[INFO] plugins/Gray_Morphology.jar ....................... SKIPPED
[INFO] plugins/Helmholtz_Analysis.jar .................... SKIPPED
[INFO] plugins/IJ_Robot.jar .............................. SKIPPED
[INFO] plugins/IO_.jar ................................... SKIPPED
[INFO] plugins/Image_Expression_Parser.jar ............... SKIPPED
[INFO] plugins/Interactive_3D_Surface_Plot.jar ........... SKIPPED
[INFO] plugins/IsoData_Classifier.jar .................... SKIPPED
[INFO] plugins/Kuwahara_Filter.jar ....................... SKIPPED
[INFO] plugins/Lasso_and_Blow_Tool.jar ................... SKIPPED
[INFO] plugins/Linear_Kuwahara.jar ....................... SKIPPED
[INFO] plugins/LocalThickness_.jar ....................... SKIPPED
[INFO] plugins/MTrack2_.jar .............................. SKIPPED
[INFO] plugins/MTrackJ_.jar .............................. SKIPPED
[INFO] plugins/M_I_P.jar ................................. SKIPPED
[INFO] plugins/Manual_Tracking.jar ....................... SKIPPED
[INFO] plugins/MosaicJ_.jar .............................. SKIPPED
[INFO] plugins/Multi_Kymograph.jar ....................... SKIPPED
[INFO] plugins/PIV_analyser.jar .......................... SKIPPED
[INFO] plugins/PointPicker_.jar .......................... SKIPPED
[INFO] plugins/QuickPALM_.jar ............................ SKIPPED
[INFO] plugins/RATS_.jar ................................. SKIPPED
[INFO] plugins/RandomJ_.jar .............................. SKIPPED
[INFO] plugins/Reconstruct_Reader.jar .................... SKIPPED
[INFO] plugins/SPIM_Opener.jar ........................... SKIPPED
[INFO] plugins/Samples_.jar .............................. SKIPPED
[INFO] plugins/Scala_Interpreter.jar ..................... SKIPPED
[INFO] plugins/Series_Labeler.jar ........................ SKIPPED
[INFO] plugins/SheppLogan_.jar ........................... SKIPPED
[INFO] plugins/Skeletonize3D_.jar ........................ SKIPPED
[INFO] plugins/VIB_.jar .................................. SKIPPED
[INFO] plugins/Simple_Neurite_Tracer.jar ................. SKIPPED
[INFO] plugins/Siox_Segmentation.jar ..................... SKIPPED
[INFO] plugins/Snakuscule_.jar ........................... SKIPPED
[INFO] plugins/SplineDeformationGenerator_.jar ........... SKIPPED
[INFO] plugins/StackReg_.jar ............................. SKIPPED
[INFO] plugins/Stack_Manipulation.jar .................... SKIPPED
[INFO] plugins/Statistical_Region_Merging.jar ............ SKIPPED
[INFO] plugins/Sync_Win.jar .............................. SKIPPED
[INFO] plugins/Thread_Killer.jar ......................... SKIPPED
[INFO] plugins/Threshold_Colour.jar ...................... SKIPPED
[INFO] plugins/Time_Stamper.jar .......................... SKIPPED
[INFO] plugins/ToAST_.jar ................................ SKIPPED
[INFO] plugins/TopoJ_.jar ................................ SKIPPED
[INFO] plugins/TransformJ_.jar ........................... SKIPPED
[INFO] plugins/TurboReg_.jar ............................. SKIPPED
[INFO] plugins/UnwarpJ_.jar .............................. SKIPPED
[INFO] jars/Updater_Fix.jar .............................. SKIPPED
[INFO] plugins/Vaa3d_Reader.jar .......................... SKIPPED
[INFO] plugins/Video_Editing.jar ......................... SKIPPED
[INFO] plugins/View5D_.jar ............................... SKIPPED
[INFO] plugins/Volume_Calculator.jar ..................... SKIPPED
[INFO] plugins/Volume_Viewer.jar ......................... SKIPPED
[INFO] plugins/bUnwarpJ_.jar ............................. SKIPPED
[INFO] plugins/blockmatching_.jar ........................ SKIPPED
[INFO] jars/mij.jar ...................................... SKIPPED
[INFO] plugins/panorama_.jar ............................. SKIPPED
[INFO] plugins/register_virtual_stack_slices.jar ......... SKIPPED
[INFO] plugins/registration_3d.jar ....................... SKIPPED
[INFO] jars/weave_jy2java.jar ............................ SKIPPED
[INFO] Aggregator project for the external Fiji plugins .. SKIPPED
[INFO] Aggregator project for the Fiji submodules ........ SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 1:00.539s
[INFO] Finished at: Mon Mar 03 14:26:35 CST 2014
[INFO] Final Memory: 112M/448M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal on project Descriptor_based_registration: Could not resolve dependencies for project sc.fiji:Descriptor_based_registration:jar:2.0.0-SNAPSHOT: Could not find artifact ome:scifio:jar:5.0.0 in imagej.public (http://maven.imagej.net/content/groups/public) -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR] mvn <goals> -rf :Descriptor_based_registration
Build step 'Invoke top-level Maven targets' marked build as failure
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