[ImageJ-builds] Build failed in Jenkins: Fiji-Maven #718
jenkins at imagej.net
jenkins at imagej.net
Mon Mar 3 12:52:24 CST 2014
See <http://jenkins.imagej.net/job/Fiji-Maven/718/changes>
Changes:
[Johannes Schindelin] Use ij1-patcher 0.1.1 in fiji-compat
[Johannes Schindelin] Clarify the temporary nature of the hardcoded versions in fiji-compat's pom
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[INFO] Copying imglib2-ij-2.0.0-beta-25.jar to /data/devel/jenkins/jobs/Fiji-Maven/workspace/jars
[INFO] Deleted overridden imglib2-ij-2.0.0-beta-24.jar
[INFO] Copying imglib2-2.0.0-beta-25.jar to /data/devel/jenkins/jobs/Fiji-Maven/workspace/jars
[INFO] Deleted overridden imglib2-2.0.0-beta-24.jar
[INFO] Dependency pal-optimization-2.0.0-SNAPSHOT.jar is already there; skipping
[INFO] Dependency 3D_Viewer-2.0.0-SNAPSHOT.jar is already there; skipping
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building plugins/Simple_Neurite_Tracer.jar 2.0.2-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] --- buildnumber-maven-plugin:1.2:create (default) @ Simple_Neurite_Tracer ---
[INFO]
[INFO] --- imagej-maven-plugin:0.3.1:set-rootdir (set-rootdir) @ Simple_Neurite_Tracer ---
[INFO]
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ Simple_Neurite_Tracer ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 3 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ Simple_Neurite_Tracer ---
[INFO] Compiling 55 source files to /data/devel/jenkins/jobs/Fiji-Maven/workspace/src-plugins/Simple_Neurite_Tracer/target/classes
[INFO]
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ Simple_Neurite_Tracer ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/Fiji-Maven/workspace/src-plugins/Simple_Neurite_Tracer/src/test/resources
[INFO]
[INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ Simple_Neurite_Tracer ---
[INFO] Compiling 2 source files to /data/devel/jenkins/jobs/Fiji-Maven/workspace/src-plugins/Simple_Neurite_Tracer/target/test-classes
[INFO]
[INFO] --- maven-surefire-plugin:2.16:test (default-test) @ Simple_Neurite_Tracer ---
[INFO] Surefire report directory: /data/devel/jenkins/jobs/Fiji-Maven/workspace/src-plugins/Simple_Neurite_Tracer/target/surefire-reports
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Running TestSuite
Configuring TestNG with: TestNG652Configurator
[TestNG] [Error] No test suite found. Nothing to run
Usage: <main class> [options] The XML suite files to run
Options:
-configfailurepolicy Configuration failure policy (skip or
continue)
-d Output directory
-dataproviderthreadcount Number of threads to use when running
data providers
-excludegroups Comma-separated list of group names to
exclude
-groups Comma-separated list of group names to be
run
-junit JUnit mode
Default: false
-listener List of .class files or list of class
names implementing ITestListener or
ISuiteListener
-methods Comma separated of test methods
Default: []
-methodselectors List of .class files or list of class
names implementing IMethodSelector
-mixed Mixed mode - autodetect the type of
current test and run it with appropriate runner
Default: false
-objectfactory List of .class files or list of class
names implementing ITestRunnerFactory
-parallel Parallel mode (methods, tests or classes)
-port The port
-reporter Extended configuration for custom report
listener
-suitename Default name of test suite, if not
specified in suite definition file or source code
-suitethreadpoolsize Size of the thread pool to use to run
suites
Default: 1
-testclass The list of test classes
-testjar A jar file containing the tests
-testname Default name of test, if not specified in
suitedefinition file or source code
-testnames The list of test names to run
-testrunfactory, -testRunFactory The factory used to create tests
-threadcount Number of threads to use when running
tests in parallel
-usedefaultlisteners Whether to use the default listeners
Default: true
-log, -verbose Level of verbosity
-xmlpathinjar The full path to the xml file inside the
jar file (only valid if -testjar was
specified)
Default: testng.xml
Configuring TestNG with: TestNG652Configurator
Tests run: 4, Failures: 2, Errors: 0, Skipped: 0, Time elapsed: 0.382 sec <<< FAILURE! - in TestSuite
testTracing on testTracing(tracing.Test3DTracing)(tracing.Test3DTracing) Time elapsed: 0.018 sec <<< FAILURE!
org.junit.internal.AssumptionViolatedException: got: <[Couldn't open the 3D test image, null]>, expected: each not null
at org.junit.Assume.assumeThat(Assume.java:70)
at org.junit.Assume.assumeNotNull(Assume.java:47)
at tracing.Test3DTracing.setUp(Test3DTracing.java:29)
testTracing on testTracing(tracing.Test2DTracing)(tracing.Test2DTracing) Time elapsed: 0 sec <<< FAILURE!
org.junit.internal.AssumptionViolatedException: got: <[Couldn't open the 2D test image, null]>, expected: each not null
at org.junit.Assume.assumeThat(Assume.java:70)
at org.junit.Assume.assumeNotNull(Assume.java:47)
at tracing.Test2DTracing.setUp(Test2DTracing.java:29)
Results :
Failed tests:
Test3DTracing.setUp:29 » AssumptionViolated got: <[Couldn't open the 3D test i...
Test2DTracing.setUp:29 » AssumptionViolated got: <[Couldn't open the 2D test i...
Tests run: 4, Failures: 2, Errors: 0, Skipped: 0
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Aggregator project for the Fiji project ........... SUCCESS [1.357s]
[INFO] Aggregator project for the Fiji plugins ........... SUCCESS [0.051s]
[INFO] jars/fiji-lib.jar ................................. SUCCESS [2.656s]
[INFO] jars/pal-optimization.jar ......................... SUCCESS [0.951s]
[INFO] jars/VIB-lib.jar .................................. SUCCESS [5.562s]
[INFO] plugins/3D_Viewer.jar ............................. SUCCESS [6.152s]
[INFO] plugins/level_sets.jar ............................ SUCCESS [1.371s]
[INFO] plugins/3D_Blob_Segmentation.jar .................. SUCCESS [1.382s]
[INFO] plugins/3D_Objects_Counter.jar .................... SUCCESS [0.821s]
[INFO] plugins/AnalyzeSkeleton_.jar ...................... SUCCESS [1.064s]
[INFO] plugins/Analyze_Reader_Writer.jar ................. SUCCESS [0.756s]
[INFO] plugins/Anisotropic_Diffusion_2D.jar .............. SUCCESS [0.744s]
[INFO] plugins/Fiji_Archipelago.jar ...................... SUCCESS [2.409s]
[INFO] jars/imagescience.jar ............................. SUCCESS [2.753s]
[INFO] plugins/Trainable_Segmentation.jar ................ SUCCESS [9.086s]
[INFO] plugins/Archipelago_Plugins.jar ................... SUCCESS [6.639s]
[INFO] plugins/Arrow_.jar ................................ SUCCESS [0.811s]
[INFO] plugins/Auto_Threshold.jar ........................ SUCCESS [0.801s]
[INFO] plugins/BalloonSegmentation_.jar .................. SUCCESS [2.560s]
[INFO] jars/fiji-compat.jar .............................. SUCCESS [5.571s]
[INFO] jars/fiji-scripting.jar ........................... SUCCESS [1.305s]
[INFO] plugins/BeanShell_Interpreter.jar ................. SUCCESS [0.837s]
[INFO] plugins/Bug_Submitter.jar ......................... SUCCESS [0.874s]
[INFO] plugins/CLI_.jar .................................. SUCCESS [1.293s]
[INFO] plugins/CPU_Meter.jar ............................. SUCCESS [0.535s]
[INFO] plugins/Calculator_Plus.jar ....................... SUCCESS [0.507s]
[INFO] plugins/Clojure_Interpreter.jar ................... SUCCESS [1.107s]
[INFO] plugins/Color_Histogram.jar ....................... SUCCESS [0.662s]
[INFO] plugins/Color_Inspector_3D.jar .................... SUCCESS [1.492s]
[INFO] plugins/Colour_Deconvolution.jar .................. SUCCESS [1.071s]
[INFO] plugins/CorrectBleach_.jar ........................ SUCCESS [0.603s]
[INFO] plugins/Fiji_Plugins.jar .......................... SUCCESS [1.590s]
[INFO] plugins/Descriptor_based_registration.jar ......... SUCCESS [6.276s]
[INFO] plugins/Dichromacy_.jar ........................... SUCCESS [0.579s]
[INFO] plugins/Differentials_.jar ........................ SUCCESS [0.781s]
[INFO] plugins/Directionality_.jar ....................... SUCCESS [2.060s]
[INFO] jars/imageware.jar ................................ SUCCESS [2.820s]
[INFO] jars/wavelets.jar ................................. SUCCESS [0.749s]
[INFO] plugins/Extended_Depth_Field.jar .................. SUCCESS [1.773s]
[INFO] plugins/FS_Align_TrakEM2.jar ...................... SUCCESS [3.959s]
[INFO] plugins/FeatureJ_.jar ............................. SUCCESS [0.857s]
[INFO] plugins/Feature_Detection.jar ..................... SUCCESS [0.925s]
[INFO] jars/fake.jar ..................................... SUCCESS [1.496s]
[INFO] plugins/JRuby_Interpreter.jar ..................... SUCCESS [1.082s]
[INFO] plugins/Javascript_.jar ........................... SUCCESS [0.768s]
[INFO] plugins/Jython_Interpreter.jar .................... SUCCESS [0.951s]
[INFO] plugins/Refresh_Javas.jar ......................... SUCCESS [1.085s]
[INFO] plugins/Script_Editor.jar ......................... SUCCESS [3.386s]
[INFO] plugins/Fiji_Developer.jar ........................ SUCCESS [2.524s]
[INFO] plugins/Fiji_Package_Maker.jar .................... SUCCESS [0.717s]
[INFO] plugins/Fiji_Updater.jar .......................... SUCCESS [0.650s]
[INFO] plugins/FlowJ_.jar ................................ SUCCESS [2.382s]
[INFO] plugins/Graph_Cut.jar ............................. SUCCESS [2.654s]
[INFO] plugins/Gray_Morphology.jar ....................... SUCCESS [0.792s]
[INFO] plugins/Helmholtz_Analysis.jar .................... SUCCESS [0.503s]
[INFO] plugins/IJ_Robot.jar .............................. SUCCESS [0.467s]
[INFO] plugins/IO_.jar ................................... SUCCESS [2.911s]
[INFO] plugins/Image_Expression_Parser.jar ............... SUCCESS [3.741s]
[INFO] plugins/Interactive_3D_Surface_Plot.jar ........... SUCCESS [1.341s]
[INFO] plugins/IsoData_Classifier.jar .................... SUCCESS [0.474s]
[INFO] plugins/Kuwahara_Filter.jar ....................... SUCCESS [0.534s]
[INFO] plugins/Lasso_and_Blow_Tool.jar ................... SUCCESS [0.663s]
[INFO] plugins/Linear_Kuwahara.jar ....................... SUCCESS [0.508s]
[INFO] plugins/LocalThickness_.jar ....................... SUCCESS [1.138s]
[INFO] plugins/MTrack2_.jar .............................. SUCCESS [0.575s]
[INFO] plugins/MTrackJ_.jar .............................. SUCCESS [1.439s]
[INFO] plugins/M_I_P.jar ................................. SUCCESS [0.627s]
[INFO] plugins/Manual_Tracking.jar ....................... SUCCESS [0.876s]
[INFO] plugins/MosaicJ_.jar .............................. SUCCESS [1.341s]
[INFO] plugins/Multi_Kymograph.jar ....................... SUCCESS [1.774s]
[INFO] plugins/PIV_analyser.jar .......................... SUCCESS [0.668s]
[INFO] plugins/PointPicker_.jar .......................... SUCCESS [0.823s]
[INFO] plugins/QuickPALM_.jar ............................ SUCCESS [0.909s]
[INFO] plugins/RATS_.jar ................................. SUCCESS [0.640s]
[INFO] plugins/RandomJ_.jar .............................. SUCCESS [0.625s]
[INFO] plugins/Reconstruct_Reader.jar .................... SUCCESS [1.750s]
[INFO] plugins/SPIM_Opener.jar ........................... SUCCESS [0.879s]
[INFO] plugins/Samples_.jar .............................. SUCCESS [0.083s]
[INFO] plugins/Scala_Interpreter.jar ..................... SUCCESS [1.773s]
[INFO] plugins/Series_Labeler.jar ........................ SUCCESS [0.816s]
[INFO] plugins/SheppLogan_.jar ........................... SUCCESS [0.485s]
[INFO] plugins/Skeletonize3D_.jar ........................ SUCCESS [0.702s]
[INFO] plugins/VIB_.jar .................................. SUCCESS [3.394s]
[INFO] plugins/Simple_Neurite_Tracer.jar ................. FAILURE [4.329s]
[INFO] plugins/Siox_Segmentation.jar ..................... SKIPPED
[INFO] plugins/Snakuscule_.jar ........................... SKIPPED
[INFO] plugins/SplineDeformationGenerator_.jar ........... SKIPPED
[INFO] plugins/StackReg_.jar ............................. SKIPPED
[INFO] plugins/Stack_Manipulation.jar .................... SKIPPED
[INFO] plugins/Statistical_Region_Merging.jar ............ SKIPPED
[INFO] plugins/Sync_Win.jar .............................. SKIPPED
[INFO] plugins/Thread_Killer.jar ......................... SKIPPED
[INFO] plugins/Threshold_Colour.jar ...................... SKIPPED
[INFO] plugins/Time_Stamper.jar .......................... SKIPPED
[INFO] plugins/ToAST_.jar ................................ SKIPPED
[INFO] plugins/TopoJ_.jar ................................ SKIPPED
[INFO] plugins/TransformJ_.jar ........................... SKIPPED
[INFO] plugins/TurboReg_.jar ............................. SKIPPED
[INFO] plugins/UnwarpJ_.jar .............................. SKIPPED
[INFO] jars/Updater_Fix.jar .............................. SKIPPED
[INFO] plugins/Vaa3d_Reader.jar .......................... SKIPPED
[INFO] plugins/Video_Editing.jar ......................... SKIPPED
[INFO] plugins/View5D_.jar ............................... SKIPPED
[INFO] plugins/Volume_Calculator.jar ..................... SKIPPED
[INFO] plugins/Volume_Viewer.jar ......................... SKIPPED
[INFO] plugins/bUnwarpJ_.jar ............................. SKIPPED
[INFO] plugins/blockmatching_.jar ........................ SKIPPED
[INFO] jars/mij.jar ...................................... SKIPPED
[INFO] plugins/panorama_.jar ............................. SKIPPED
[INFO] plugins/register_virtual_stack_slices.jar ......... SKIPPED
[INFO] plugins/registration_3d.jar ....................... SKIPPED
[INFO] jars/weave_jy2java.jar ............................ SKIPPED
[INFO] Aggregator project for the external Fiji plugins .. SKIPPED
[INFO] Aggregator project for the Fiji submodules ........ SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 2:23.609s
[INFO] Finished at: Mon Mar 03 12:52:23 CST 2014
[INFO] Final Memory: 115M/416M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.16:test (default-test) on project Simple_Neurite_Tracer: There are test failures.
[ERROR]
[ERROR] Please refer to /data/devel/jenkins/jobs/Fiji-Maven/workspace/src-plugins/Simple_Neurite_Tracer/target/surefire-reports for the individual test results.
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR] mvn <goals> -rf :Simple_Neurite_Tracer
Build step 'Invoke top-level Maven targets' marked build as failure
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